prot_L-elsbetiae_contig1982.5927.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1982.5927.1
Unique Nameprot_L-elsbetiae_contig1982.5927.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length230
Homology
BLAST of mRNA_L-elsbetiae_contig1982.5927.1 vs. uniprot
Match: D8LT01_ECTSI (DNA polymerase delta subunit 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT01_ECTSI)

HSP 1 Score: 279 bits (714), Expect = 8.870e-90
Identity = 172/226 (76.11%), Postives = 186/226 (82.30%), Query Frame = 0
Query:    1 MAADAS-SSGSTQVQYLEELEGWVLDEQKVVTFRWLALVLSVTANAAKKMLYDFCQRQGERKVTATYLVMGRRGGAXXXXXAMEVKLVSAEGLESTREGLETVTSVHVYSVQAAPCSQPA-DFSTQLWAADQEHSKEMVGQTTDAGANLRTHRLSGVRCPEAADIPVPKAPPPPEHVREESPFGGARXXXXXXXXXXXXXXXXXXXXXXXKPKGKAIAPEDFFAAA 224
            MAADA+ +SG TQVQYL+ELEGWVLDEQKVVTFRWLALVLSVTANAAKKMLYDFCQRQGERKV+ATYLV+GR G       A+EVKLVSAEGL+STR+ LETVT VHVYSVQ APCSQPA D STQLWA D EH+KEMV ++T+AGANLRTHRLSGVRCPE  D+PVPKAPP               XXXXXXXXXXXXXXXXXX     KPKGKAIAP+DFFAAA
Sbjct:    1 MAADAADASGGTQVQYLDELEGWVLDEQKVVTFRWLALVLSVTANAAKKMLYDFCQRQGERKVSATYLVVGRSG--IGGFGAVEVKLVSAEGLDSTRKALETVTCVHVYSVQPAPCSQPAADMSTQLWATDLEHTKEMVEESTEAGANLRTHRLSGVRCPEGVDVPVPKAPP--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNASSKPKGKAIAPKDFFAAA 222          
BLAST of mRNA_L-elsbetiae_contig1982.5927.1 vs. uniprot
Match: UPI0001CB96C3 (DNA polymerase delta subunit 3-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0001CB96C3)

HSP 1 Score: 85.9 bits (211), Expect = 6.440e-16
Identity = 49/131 (37.40%), Postives = 75/131 (57.25%), Query Frame = 0
Query:   15 YLEELEGWVLDEQKVVTFRWLALVLSVTANAAKKMLYDFCQRQGERKVTATYLVMGRRGGAXXXXXAMEVKLVSAEGLESTREGLETVTSVHVYSVQAAPCSQPADFSTQLWAADQEHSKEMVGQTTDAGA 145
            YLE L+ +V+DE K+VT++WL+  LSV  N AK+MLY + Q+Q ++ +  TYLV G +          ++ LV    LE+T+  L+ VTSVH+YS+           S  L+  D + +KE + Q+   GA
Sbjct:    7 YLENLQEYVVDENKIVTYKWLSKTLSVHVNQAKQMLYMYVQKQKKKDLCVTYLVGGEQKDGDGLVMK-KLSLVRGNQLEATKCSLDKVTSVHIYSIHKCLLKD----SNALYTVDYDITKEHLHQSNKFGA 132          
BLAST of mRNA_L-elsbetiae_contig1982.5927.1 vs. uniprot
Match: UPI001C717AB1 (DNA polymerase delta subunit 3-like n=1 Tax=Penaeus japonicus TaxID=27405 RepID=UPI001C717AB1)

HSP 1 Score: 85.1 bits (209), Expect = 1.810e-15
Identity = 55/155 (35.48%), Postives = 82/155 (52.90%), Query Frame = 0
Query:   10 STQVQYLEELEGWVLDEQKVVTFRWLALVLSVTANAAKKMLYDFC--QRQGER--KVTATYLVMGRRGGAXXXXXAMEVKLVSAEGLESTREGLETVTSVHVYSVQAAPCSQPADFSTQLWAADQEHSKEMVGQTTDAGANLRTHRLSGVRCPEA 160
            S    YL+ LE +V+DE K++T++WL+L L V++N AK+MLY F   QR  ++   +  TY V G   G        +V LV  E L S +  L+ V S+HVYSVQ    ++  D S  L+ A+ +  KE +         L  ++ SG+ C  A
Sbjct:    6 SMDSMYLDNLEEFVVDEGKIITYKWLSLTLGVSSNVAKQMLYHFVTNQRNSDKGDNLNVTYFVSGLEAGEDGLPDMHKVMLVREENLASAKSKLKDVKSIHVYSVQK---TKLPDMSV-LYTANYDKVKENI---------LTINKYSGIECSAA 147          
BLAST of mRNA_L-elsbetiae_contig1982.5927.1 vs. uniprot
Match: UPI0014257AE6 (DNA polymerase delta subunit 3-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI0014257AE6)

HSP 1 Score: 85.1 bits (209), Expect = 1.820e-15
Identity = 52/149 (34.90%), Postives = 79/149 (53.02%), Query Frame = 0
Query:   15 YLEELEGWVLDEQKVVTFRWLALVLSVTANAAKKMLYDFCQRQGERK---VTATYLVMGRRGGAXXXXXAMEVKLVSAEGLESTREGLETVTSVHVYSVQAAPCSQPADFSTQLWAADQEHSKEMVGQTTDAGANLRTHRLSGVRCPEA 160
            YLE LE +V DE ++VT++WL+  L V  N AK+MLY F  +Q +++   V  TYLV G +          +V +V+A+ LE  +  L+ V+ VH+YS+Q A        S  L+ AD + + E + Q   +       R S + C EA
Sbjct:    6 YLENLEEFVFDENRIVTYKWLSQTLQVHVNLAKQMLYTFFNQQKDKEADSVNVTYLVSGVQS-IDNGEKVRKVSIVNAQNLEKHKASLQCVSGVHIYSIQKAQLKD----SNSLYTADYDLTLEQIKQAACS-------RFSAIECAEA 142          
BLAST of mRNA_L-elsbetiae_contig1982.5927.1 vs. uniprot
Match: UPI000F67B6F5 (DNA polymerase delta subunit 3-like n=3 Tax=Penaeus TaxID=133894 RepID=UPI000F67B6F5)

HSP 1 Score: 84.7 bits (208), Expect = 2.480e-15
Identity = 57/155 (36.77%), Postives = 80/155 (51.61%), Query Frame = 0
Query:   10 STQVQYLEELEGWVLDEQKVVTFRWLALVLSVTANAAKKMLYDFC--QRQGER--KVTATYLVMGRRGGAXXXXXAMEVKLVSAEGLESTREGLETVTSVHVYSVQAAPCSQPADFSTQLWAADQEHSKEMVGQTTDAGANLRTHRLSGVRCPEA 160
            S    YL+ LE +V DE K+VT++WL+L L V +N AK+MLY F   QR  ++   +  TY V G   G        ++ LV  E L S +  L+ V SVHVYSVQ    ++  D S  L+ A+ +  KE V         L  ++ SG+ C  A
Sbjct:    6 SMDSMYLDNLEEFVFDEGKIVTYKWLSLTLGVQSNVAKQMLYHFVTNQRNSDKGDNLNVTYFVSGLEAGKDGLPDMHKIMLVREENLASAKSKLKDVMSVHVYSVQK---TKLPDMSV-LYTANYDKVKENV---------LSINKYSGIECTAA 147          
BLAST of mRNA_L-elsbetiae_contig1982.5927.1 vs. uniprot
Match: UPI00148A5E77 (DNA polymerase delta subunit 3 isoform X1 n=3 Tax=Crassostrea gigas TaxID=29159 RepID=UPI00148A5E77)

HSP 1 Score: 82.0 bits (201), Expect = 3.330e-15
Identity = 58/164 (35.37%), Postives = 80/164 (48.78%), Query Frame = 0
Query:   10 STQVQYLEELEGWVLDEQKVVTFRWLALVLSVTANAAKKMLYDFCQRQGERK--VTATYLVMGR-RGGAXXXXXAMEVKLVSAEGLESTREGLETVTSVHVYSVQAAPCSQPADFSTQLWAADQEHSKEMVGQTTDAGANLRTHRLSGVRCPEAADIPVPKAPP 170
            +T   YLE LE +V DE K+VT++WL+L L V  N AK+MLY F + Q +RK  V ATY V G  +             ++  E LE+ +  L TV S+HVYSVQ A        S  L+ AD +  KE +            H+   ++  +A      K PP
Sbjct:    2 ATDSMYLENLEEYVNDEGKIVTYKWLSLNLHVHVNEAKQMLYTFVEEQKKRKIHVAATYFVSGMCKSVDGCQVQTYTCTVIPEEELETFKNSLTTVHSIHVYSVQKAGLKD----SNSLYLADYDCVKENL---------FEIHKYRSIKYGKAQPSSEAKRPP 152          
BLAST of mRNA_L-elsbetiae_contig1982.5927.1 vs. uniprot
Match: UPI001B88DBF9 (DNA polymerase delta subunit 3-like isoform X1 n=2 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88DBF9)

HSP 1 Score: 82.0 bits (201), Expect = 1.920e-14
Identity = 51/149 (34.23%), Postives = 77/149 (51.68%), Query Frame = 0
Query:   15 YLEELEGWVLDEQKVVTFRWLALVLSVTANAAKKMLYDFCQRQGERK---VTATYLVMGRRGGAXXXXXAMEVKLVSAEGLESTREGLETVTSVHVYSVQAAPCSQPADFSTQLWAADQEHSKEMVGQTTDAGANLRTHRLSGVRCPEA 160
            YL+ L+ +V DE +VVT++WL+ VL+V  N AK+ML+ FC++Q  +    ++ TY V G            +  +VS E LES +  L  V  VH+YS+  +        S  L+ AD +  KE   Q+T         + S +RCP A
Sbjct:    7 YLDNLDEFVNDENRVVTYKWLSRVLTVHVNEAKRMLFAFCEQQRNKDHDDISVTYFVAGSTAAGMHSPQEYKCAVVSEEQLESYKASLAVVNCVHIYSIHKSKLKD----SNALYIADCDGFKEHALQST---------QHSAIRCPWA 142          
BLAST of mRNA_L-elsbetiae_contig1982.5927.1 vs. uniprot
Match: A0A2P6N713_9EUKA (DNA polymerase delta subunit 3 n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6N713_9EUKA)

HSP 1 Score: 82.0 bits (201), Expect = 1.960e-14
Identity = 46/142 (32.39%), Postives = 79/142 (55.63%), Query Frame = 0
Query:   15 YLEELEGWVLDEQKVVTFRWLALVLSVTANAAKKMLYDFCQRQGERKVTATYLVMGRRGGAXXXXXAMEVKLVSAEGLESTREGLETVTSVHVYSVQAAPCSQPADFSTQLWAADQEHSKEMVGQTTDAGANLRTHRLSGVR 156
            Y++ LE WV +++K++T++WL+  L+V  N AKKMLY F ++ G +K+   Y + G++ G        E  LV  + LE  R+  + ++ VH+YSVQ    S+  + + QLW AD    +  + +    GA    +R S ++
Sbjct:    7 YIDNLENWVCEDRKIITYKWLSHELNVANNIAKKMLYAFAEKMG-KKIKVIYFIGGKKDGTY------EFMLVRDQLLEECRKQFDEISGVHIYSVQ----SELPNDAIQLWNADAVQYQNALQK--GEGAQYLDNRYSSIQ 135          
BLAST of mRNA_L-elsbetiae_contig1982.5927.1 vs. uniprot
Match: UPI0014553F90 (DNA polymerase delta subunit 3-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI0014553F90)

HSP 1 Score: 80.9 bits (198), Expect = 5.070e-14
Identity = 56/149 (37.58%), Postives = 74/149 (49.66%), Query Frame = 0
Query:   15 YLEELEGWVLDEQKVVTFRWLALVLSVTANAAKKMLYDFCQRQGERKVTATYLVMG---RRGGAXXXXXAMEVKLVSAEGLESTREGLETVTSVHVYSVQAAPCSQPADFSTQLWAADQEHSKEMVGQTTDAGANLRTHRLSGVRCPEA 160
            YLE LE +V DE KVVT+RWL+  LSV  N AK+ML  F ++   + V  TYL+ G   +  G         V LVS + L+ +   L  V S HVYSVQ A        +  L+  D E  KE + Q          +R S ++C EA
Sbjct:    6 YLENLEEFVFDEDKVVTYRWLSQTLSVHVNRAKQMLATFVEQTKPKAVNVTYLLSGIEEKENGVKVNI----VTLVSDDNLKKSEASLSKVLSKHVYSVQQAKLKD----TNSLYMTDYEIIKENITQP---------NRYSAIKCTEA 137          
BLAST of mRNA_L-elsbetiae_contig1982.5927.1 vs. uniprot
Match: A7SVP8_NEMVE (DNA polymerase delta subunit 3 n=7 Tax=Nematostella vectensis TaxID=45351 RepID=A7SVP8_NEMVE)

HSP 1 Score: 80.5 bits (197), Expect = 6.960e-14
Identity = 53/153 (34.64%), Postives = 81/153 (52.94%), Query Frame = 0
Query:   15 YLEELEGWVLDEQKVVTFRWLALVLSVTANAAKKMLYDFCQRQGERK----VTATYLVMGRRGGAXXXXXAMEVKLVSAEGLESTREGLETVTSVHVYSVQAAPCSQPADFSTQLWAADQEHSKEMVGQTTDAGANLRTHRLSGVRCPEAADI 163
            +++ LE +V DE ++VT++WL+  L+VTAN AK+MLY F   Q E+K    ++ TYLV GR           +  L + + LE T+   + VTSVH+YS+Q     Q    S  L+  D + S+E   +          +R S + C EAA +
Sbjct:    8 FMDNLEEFVYDEDRIVTYKWLSRTLTVTANQAKQMLYAFLTAQQEKKNKPQLSVTYLVGGRI--LQHGEMCSQYVLTTDDRLEETKSQFDPVTSVHIYSIQ----KQTLKDSNSLYMVDYDISREHKHED---------NRWSHIYCKEAARL 145          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1982.5927.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LT01_ECTSI8.870e-9076.11DNA polymerase delta subunit 3 n=1 Tax=Ectocarpus ... [more]
UPI0001CB96C36.440e-1637.40DNA polymerase delta subunit 3-like n=1 Tax=Saccog... [more]
UPI001C717AB11.810e-1535.48DNA polymerase delta subunit 3-like n=1 Tax=Penaeu... [more]
UPI0014257AE61.820e-1534.90DNA polymerase delta subunit 3-like n=1 Tax=Anneis... [more]
UPI000F67B6F52.480e-1536.77DNA polymerase delta subunit 3-like n=3 Tax=Penaeu... [more]
UPI00148A5E773.330e-1535.37DNA polymerase delta subunit 3 isoform X1 n=3 Tax=... [more]
UPI001B88DBF91.920e-1434.23DNA polymerase delta subunit 3-like isoform X1 n=2... [more]
A0A2P6N713_9EUKA1.960e-1432.39DNA polymerase delta subunit 3 n=1 Tax=Planoprotos... [more]
UPI0014553F905.070e-1437.58DNA polymerase delta subunit 3-like n=1 Tax=Asteri... [more]
A7SVP8_NEMVE6.960e-1434.64DNA polymerase delta subunit 3 n=7 Tax=Nematostell... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019038DNA polymerase delta subunit 3PFAMPF09507CDC27coord: 28..177
e-value: 3.2E-25
score: 89.4
IPR019038DNA polymerase delta subunit 3PANTHERPTHR17598FAMILY NOT NAMEDcoord: 11..211
IPR041913DNA polymerase delta subunit 3 superfamilyGENE3D1.10.10.1300coord: 11..163
e-value: 1.3E-32
score: 114.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1982contigL-elsbetiae_contig1982:16934..21296 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1982.5927.1mRNA_L-elsbetiae_contig1982.5927.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1982 16934..21296 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1982.5927.1 ID=prot_L-elsbetiae_contig1982.5927.1|Name=mRNA_L-elsbetiae_contig1982.5927.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=230bp
MAADASSSGSTQVQYLEELEGWVLDEQKVVTFRWLALVLSVTANAAKKML
YDFCQRQGERKVTATYLVMGRRGGAGGAGGAMEVKLVSAEGLESTREGLE
TVTSVHVYSVQAAPCSQPADFSTQLWAADQEHSKEMVGQTTDAGANLRTH
RLSGVRCPEAADIPVPKAPPPPEHVREESPFGGARGGAASGGAGGGRGKS
AAGAAASSKPKGKAIAPEDFFAAAAGSGKG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019038POLD3
IPR041913POLD3_sf