prot_L-elsbetiae_contig1978.5904.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1978.5904.1
Unique Nameprot_L-elsbetiae_contig1978.5904.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length439
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1978.5904.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013815ATP-grasp fold, subdomain 1GENE3D3.30.1490.20coord: 200..270
e-value: 1.1E-14
score: 56.6
IPR004344Tubulin-tyrosine ligase/Tubulin polyglutamylasePFAMPF03133TTLcoord: 206..430
e-value: 1.3E-11
score: 44.2
NoneNo IPR availableGENE3D3.30.470.20coord: 198..431
e-value: 1.1E-14
score: 56.6
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 75..95
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 96..439
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..74
NoneNo IPR availableSUPERFAMILY56059Glutathione synthetase ATP-binding domain-likecoord: 213..432
NoneNo IPR availableTMHMMTMhelixcoord: 75..97

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1978contigL-elsbetiae_contig1978:12859..17855 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1978.5904.1mRNA_L-elsbetiae_contig1978.5904.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1978 12857..17855 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1978.5904.1 ID=prot_L-elsbetiae_contig1978.5904.1|Name=mRNA_L-elsbetiae_contig1978.5904.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=439bp
HPSNRISPSKKTSPRAAAAVRIYCCLRLPTTKLRLHSLPPVRRSKAHGNQ
SVQGSQHTATPLEPKRCAVRYSTTMVRCLGITALVLTIIGVIGVVPASPA
PPPTSGVVPEPAEAELERIGDLLELATAGKYPGTDRVRPGRYGDRPVWSQ
RTAVLYFNRRQAGGALMWLTLALGKLGASRKNVISNKKRWMAVWEDAHPA
EFAHMKKYLPRTWVDIASFENDANESDLYVYKPVLGFGGEGIAFERGDRL
VRRLREQQPAGNWVVQEFINPFLYHGRKTHMRPITLFIIQPDGTREFFIY
NKMRVFTAAEDFDEDRLLEGGDNSFMLLSNMHQNKLLFERDPKNAGKRFE
STECVLDAETVLSSADSDLSFDKVFSDSKEMHSIIYSIIGDLLECEGTSV
SLYDNACFHIMASDVAFDKYGKPYFLEMNTAMAYNGVWT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013815ATP_grasp_subdomain_1
IPR004344TTL/TTLL_fam