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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | signal anchor |
| Exons | 3 |
| Model size | 1321 |
| Cds size | 1317 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815818.8962803-CDS-L-elsbetiae_contig1978:12858..13554 | 1622815818.8962803-CDS-L-elsbetiae_contig1978:12858..13554 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1978 12859..13554 - |
| 1691683123.2097301-CDS-L-elsbetiae_contig1978:12858..13554 | 1691683123.2097301-CDS-L-elsbetiae_contig1978:12858..13554 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1978 12859..13554 - |
| 1622815818.9104187-CDS-L-elsbetiae_contig1978:14570..15111 | 1622815818.9104187-CDS-L-elsbetiae_contig1978:14570..15111 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1978 14571..15111 - |
| 1691683123.2218134-CDS-L-elsbetiae_contig1978:14570..15111 | 1691683123.2218134-CDS-L-elsbetiae_contig1978:14570..15111 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1978 14571..15111 - |
| 1622815818.9253986-CDS-L-elsbetiae_contig1978:17775..17855 | 1622815818.9253986-CDS-L-elsbetiae_contig1978:17775..17855 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1978 17776..17855 - |
| 1691683123.231332-CDS-L-elsbetiae_contig1978:17775..17855 | 1691683123.231332-CDS-L-elsbetiae_contig1978:17775..17855 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1978 17776..17855 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1978.5904.1 >prot_L-elsbetiae_contig1978.5904.1 ID=prot_L-elsbetiae_contig1978.5904.1|Name=mRNA_L-elsbetiae_contig1978.5904.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=439bp
HPSNRISPSKKTSPRAAAAVRIYCCLRLPTTKLRLHSLPPVRRSKAHGNQ
SVQGSQHTATPLEPKRCAVRYSTTMVRCLGITALVLTIIGVIGVVPASPA
PPPTSGVVPEPAEAELERIGDLLELATAGKYPGTDRVRPGRYGDRPVWSQ
RTAVLYFNRRQAGGALMWLTLALGKLGASRKNVISNKKRWMAVWEDAHPA
EFAHMKKYLPRTWVDIASFENDANESDLYVYKPVLGFGGEGIAFERGDRL
VRRLREQQPAGNWVVQEFINPFLYHGRKTHMRPITLFIIQPDGTREFFIY
NKMRVFTAAEDFDEDRLLEGGDNSFMLLSNMHQNKLLFERDPKNAGKRFE
STECVLDAETVLSSADSDLSFDKVFSDSKEMHSIIYSIIGDLLECEGTSV
SLYDNACFHIMASDVAFDKYGKPYFLEMNTAMAYNGVWT back to topmRNA from alignment at L-elsbetiae_contig1978:12857..17855- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig1978.5904.1 ID=mRNA_L-elsbetiae_contig1978.5904.1|Name=mRNA_L-elsbetiae_contig1978.5904.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4999bp|location=Sequence derived from alignment at L-elsbetiae_contig1978:12857..17855- (Laminarionema elsbetiae ELsaHSoW15)
CACCCGTCAAACAGAATCTCCCCGTCGAAAAAAACATCGCCACGCGCCGC
TGCTGCCGTGCGTATTTACTGCTGTCTCAGGTGAGGGAAATCAGTAGACA
CTATGCAGCAGCAGTATCTACACAAACTCCGTTCGGTGTATCATGCTACA
ACATGTATAGATATATTGTCTAGTCTATAACAGGCACATTATTGTTCTGT
TCATACATACATACGTGTGAAACGAAGATACACATGCGTGCTGGGTTGAG
TAGATAGAGCGGTCCGTCCGGTGCTCCCGGCTCTTCGTTTGCTTGGCAGG
GGTGCTGATGATCGTATACGCCCGGTAGCACAGAAGAAAGATAACAACTT
TGCACTAACTACTTTACAGTCGGCCATGAACGAACCGCTCCTTTTATCTA
GATACATTTACAATTCTAGCGTGTCTACGAAGTGTCATTTCAGATACAAA
TTTAAATTTTTATTTCATGCATGCAAATGTCAGCAGTGTGTTTGAAAAAG
TCGTCCTCCAGAGGGAACTAGTTTAGGCATACTACGATAGCCCCCCCCCC
CCTTCCCGTGCAAGACATACTGGCACGAAATCCGTTATCCATTGATACAC
AGTTCGTTGGTGAAAAAATCATTTCAGACAACAAGTTATGTATCCGCTCG
CACGGACAAACAACAAATAGAAAAAAAGAAAAAGTGTCCACACGCACATT
TTGTCACATAGTAACAGGAATTGTTTTAGAAAATAGGTGTCTGCGCCAGA
CAGGTCAACGAAAAGACGGGAGTATGAAGGGGTGGGCCTGGGATGCATGC
GGGTGAGCGCGTGCGCGTGCTGTTTTGCGCGCGAAAATGCAGCCATCTCC
TCAACGGCCGAGGCTCCAGATGAAGGGCAAGGAAGTCATCGCGTTTCTGC
TCCTTGGTGCTCGTTCTCACGCTTCAAGTTGCCACTCTCTGCAGTGCATT
CCTGGAAGCTTCCCGGATGTTTACCCCGAACACTGTGCGTGAGTTTTTTT
TCTTCACATTAAAAACCGTTCCGATCTCTCCATCCAGTACCTCCGTACGT
CCGTACTAATCAAGCACTCGACGCGGTCGATTCCTGTGGTCACCGGCTAA
CTTACCCTAAGAAATGGTATACTGAAAAAATAAGTATAAGTTAGCCTGTG
ACCACGGTAATTGACCGCATCAAGTGTGCCCATAGGGAGGTACTGGGTCG
AGAGGTCGGAACGGTTTTTAATGTGAAGAAACAACAACAACAACAACAAC
ACGGTATGTGGGGTAAAAACAAAACCTGGAACATCCAACATCCTATCTTG
GTAACCCAACAATGCGGGGTGTTCCTCGCCCGGGTTCTCGCCGGTCAGGC
CAATCCACCTAGTCCTCTCCATCGATTATAGTACCAAAGAGAGGTCAAGG
AATCGGACCAAATGAAAATTGGAAGTGCCAAACAACCGGAAATGCAAACA
AACAAACGCACGTGTGCCATACGTAAAAGAGGCCCCAGACGAAAATCAGT
ACCAAACACCCCGGCGGTGGTGCACGCTGGTACAGGAGGTTAGTCAAGAT
TTCGGTCCGCAACATGTTGTGCTGCTGCCTCCGTCTCTGCCCTCTTGCAT
TCGTCGCGTGCAGTTTCAATCGTCTTCGTACCTGTTCGTCTGTTGGTCGT
AGGCCCGTTTTTGTCTCGGTTGGACACTGCTTGCAATTATTATTGTTAAA
TAAATCGTCAATAGAGTCTTTGCGTTTGTTTCTCCGGGCCGTATTGACCT
TTTTGTTACCTCGGTGGGTGATTTGCTTGACTCGAGCATTTCGACCTTTT
GAGTGAGATGTCACTAGATAGAATGTCTGTGAACCCGACATAAATGTAGC
TTTGATTTTGTTAGTGTAGGTTACCCCGAACCAAAATTGAACCAAAAGTG
CTGAAACAGGGGCTTCAAATCAGGCTCGGAAAAACAAACGCGTTCACTCT
AGTGACCACGAAGTGAAATCACTTCTCTTACATATTTTGCTGAGCAGTGG
CAGTTCGGCACGTAACAAAATCTGTTTTGGAAGATAGGTGTCTGCGCCAG
AAATATAGATCAAAATAAGGGGGACATGAAAGGGTCATGGTTAGCCGAGC
TGAGGTGCTATTTTGCGCGCGAAAATTGGATCATCTCTTCAACAGCTGAG
ACTTCAGATGAAGGACAAGGAAGCCGCCGTGTTTCTGCTCCCTGGGTGCT
CGTTCTCACGCTTCAAGTTAGCTCTCTGCAGCATATTCCTGGAAGATTCT
CGGGATACCTAGCCCGAACACAGCTTAAAATTATTGGTAAATCGTCAATT
ATGACATGAATTGAAGCCCTGATTCAATTTTGGTTCGGGGTAACCTACAC
TAAGCAATCAAAGCCCCATTTCGGGTTCGCAGACACTCTATTGGTCGACG
CTCTTTCATGCTCAAGGCAGCGTGCCCAGCCTCGCCACATTCGCTTTCTT
ATTCACCTGTGTTTTTTATCTCGACTTTTTGTTTCTTAGAATTCCAGGCA
TATTTGCATACGACGGGCGAGCTGCCCGGCACTACACTACCCCTGACTCT
ACGAAAAGGCTCTCACTAAGTCCGTGAACAACTTAATGCAGCGTGCCTTG
CTTTCCGCACCCACTCAATCCCGTCCTTTTGTTTGTCCGGGTGCACACCC
AATCCTCTCAAGCCTCCTGCTGTACATGCCACCCGAACCCGTTTGTTTGC
ATATCTTTCTCTCCCCATGCCTTTTCACGCCCGTTGTCAGGCAGGCTTCC
GACAACAAAGCTCAGGCTTCATTCTCTGCCCCCTGTTCGCCGCAGCAAGG
CACACGGCAACCAAAGCGTGCAAGGAAGCCAGCACACGGCAACACCCCTC
GAGCCAAAACGCTGCGCGGTGCGGTACAGTACGACGATGGTACGGTGCCT
GGGGATCACCGCTTTGGTGCTCACAATCATTGGCGTGATTGGCGTCGTTC
CTGCCTCTCCTGCCCCTCCACCGACCAGCGGGGTTGTCCCAGAACCCGCG
GAGGCCGAACTAGAGCGCATCGGGGACCTGTTAGAGCTTGCCACGGCGGG
AAAGTACCCAGGGACGGACCGTGTCCGCCCCGGTAGGTACGGCGACCGTC
CAGTCTGGTCTCAAAGGACGGCGGTGTTGTACTTCAATCGCCGCCAGGCC
GGAGGGGCCCTCATGTGGCTAACACTCGCCCTGGGAAAGCTCGGGGCCTC
AAGGAAGAACGTTATCTCCAACAAGAAAAGGTGGATGGCCGTGTGGGAGG
ACGCCCACCCCGCCGAGTTCGCTCACATGAAGAAGGTGAGAGGGCGGGGA
AGGATTTTCAAATCTGGGGAATGGAATACAACGTGCGTCTAAAAAGGGGT
TGTGGGGCCAAGGAAGCAGGACAGGTGATCGAGAGAGTGTTCGACAGAAG
GGAGAAGGGGAGGGGGAATAGGTAGGGGCCTTCTTGGTTGCTCGCCCAAG
TTGCGCACCATTCCCACGCATCAGGCGAAGCCGTTTCCCCTCCTCCTGCT
GGTGGCGGGCTCTCAACGTTACGGCCACATCTACACAACGCGTTTTGCGC
CTTCTTTTGTATCCACTACACTATTTCTACCTGGCCGGAGGAAGAGGGGC
GAAAGGGGGAGACCCAGCGTCGACCAAAAAACCCTCGAGTTCCCCCAGGA
AATGGTGATCCTCCCCCCCCCCCCCGCGCCATCCACTTTCAGGCCGAGCA
GGTATCGTGTATCTAAACAAGTGCCCCCCGCGATAGTCGTTTCCCCTGCA
GGCTTCGCACACCATGTGCTTTTCATCATAGGGCATCGAATGAGAGCAAG
TCTCGGGGCTGAATAACACATTTATCTGCGCTCTGCACTACAAATGTGTG
ATGTCCTCTTGGAATGATATACATATGTACGAGATACATAGATGCTGGCT
AGGCCCGACATCGCCTCGTTGTAAGAGGAAGGCTCGACCAGTATTTTTGA
GCCCCTCCCCAGGAAGCATTCCTCTTGGGGTAGCTCAAAAACACATGCAC
ATATCTCCCCTTTCCTGAGCTATTTCAACAAAACAAAACTCGATGGGTTC
AACGGTACGCTATATAGGCGAGCACTCCCCAAAACTTGAGTTAGTGCGTG
CTAGACGTGCTTTGCGCTTCTTGTGACTGTCTCCTATCGACCTTGCGTTT
AGTTTCTGCTTGTGACAGCTGTAGCATGCAGACAGCCATTTTTCTCTGCG
TTTAGCTTTCTCGCTGGAACCGCATCTACAGCTGCTCCTGTTTCATTCTC
AAGGGTAACACCATCCGCACCCCCGTTGCTTTTCTCTTCTTCTGTTTTAA
GTACTTGCCCAGGACGTGGGTTGATATCGCTTCGTTTGAGAATGACGCGA
ACGAGAGCGACCTGTACGTGTACAAGCCGGTTCTCGGGTTCGGGGGGGAA
GGGATCGCGTTCGAGCGCGGCGATCGACTGGTGCGACGCCTTCGGGAGCA
GCAGCCGGCTGGTAACTGGGTCGTGCAGGAGTTCATCAACCCGTTTCTCT
ACCACGGGAGGAAAACGCACATGCGGCCCATCACGCTATTCATCATTCAG
CCCGACGGCACGAGAGAGTTCTTTATCTACAACAAGATGAGGGTGTTCAC
CGCGGCCGAGGACTTCGACGAGGATCGGCTGCTGGAGGGCGGGGATAACT
CGTTCATGCTCTTGAGCAACATGCATCAGAACAAGCTCCTGTTCGAGAGG
GACCCCAAGAACGCGGGGAAGAGGTTCGAGTCCACCGAGTGCGTCCTGGA
CGCGGAAACCGTCTTGAGCTCTGCCGACAGCGATCTTTCCTTCGACAAGG
TGTTCAGCGACTCGAAGGAGATGCACTCCATCATTTATTCCATCATTGGA
GACCTGCTCGAGTGCGAGGGGACGAGCGTATCTCTGTACGATAATGCCTG
TTTTCACATCATGGCCTCAGACGTGGCGTTTGATAAATACGGCAAGCCCT
ACTTTCTAGAGATGAACACCGCCATGGCTTACAATGGCGTCTGGACAGC back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig1978:12857..17855- >mRNA_L-elsbetiae_contig1978.5904.1 ID=mRNA_L-elsbetiae_contig1978.5904.1|Name=mRNA_L-elsbetiae_contig1978.5904.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2634bp|location=Sequence derived from alignment at L-elsbetiae_contig1978:12857..17855- (Laminarionema elsbetiae ELsaHSoW15)
CACCCGTCAAACAGAATCTCCCCGTCGAAAAAAACATCGCCACGCGCCGC
TGCTGCCGTGCGTATTTACTGCTGTCTCAGCACCCGTCAAACAGAATCTC
CCCGTCGAAAAAAACATCGCCACGCGCCGCTGCTGCCGTGCGTATTTACT
GCTGTCTCAGGCTTCCGACAACAAAGCTCAGGCTTCATTCTCTGCCCCCT
GTTCGCCGCAGCAAGGCACACGGCAACCAAAGCGTGCAAGGAAGCCAGCA
CACGGCAACACCCCTCGAGCCAAAACGCTGCGCGGTGCGGTACAGTACGA
CGATGGTACGGTGCCTGGGGATCACCGCTTTGGTGCTCACAATCATTGGC
GTGATTGGCGTCGTTCCTGCCTCTCCTGCCCCTCCACCGACCAGCGGGGT
TGTCCCAGAACCCGCGGAGGCCGAACTAGAGCGCATCGGGGACCTGTTAG
AGCTTGCCACGGCGGGAAAGTACCCAGGGACGGACCGTGTCCGCCCCGGT
AGGTACGGCGACCGTCCAGTCTGGTCTCAAAGGACGGCGGTGTTGTACTT
CAATCGCCGCCAGGCCGGAGGGGCCCTCATGTGGCTAACACTCGCCCTGG
GAAAGCTCGGGGCCTCAAGGAAGAACGTTATCTCCAACAAGAAAAGGTGG
ATGGCCGTGTGGGAGGACGCCCACCCCGCCGAGTTCGCTCACATGAAGAA
GGCTTCCGACAACAAAGCTCAGGCTTCATTCTCTGCCCCCTGTTCGCCGC
AGCAAGGCACACGGCAACCAAAGCGTGCAAGGAAGCCAGCACACGGCAAC
ACCCCTCGAGCCAAAACGCTGCGCGGTGCGGTACAGTACGACGATGGTAC
GGTGCCTGGGGATCACCGCTTTGGTGCTCACAATCATTGGCGTGATTGGC
GTCGTTCCTGCCTCTCCTGCCCCTCCACCGACCAGCGGGGTTGTCCCAGA
ACCCGCGGAGGCCGAACTAGAGCGCATCGGGGACCTGTTAGAGCTTGCCA
CGGCGGGAAAGTACCCAGGGACGGACCGTGTCCGCCCCGGTAGGTACGGC
GACCGTCCAGTCTGGTCTCAAAGGACGGCGGTGTTGTACTTCAATCGCCG
CCAGGCCGGAGGGGCCCTCATGTGGCTAACACTCGCCCTGGGAAAGCTCG
GGGCCTCAAGGAAGAACGTTATCTCCAACAAGAAAAGGTGGATGGCCGTG
TGGGAGGACGCCCACCCCGCCGAGTTCGCTCACATGAAGAAGTACTTGCC
CAGGACGTGGGTTGATATCGCTTCGTTTGAGAATGACGCGAACGAGAGCG
ACCTGTACGTGTACAAGCCGGTTCTCGGGTTCGGGGGGGAAGGGATCGCG
TTCGAGCGCGGCGATCGACTGGTGCGACGCCTTCGGGAGCAGCAGCCGGC
TGGTAACTGGGTCGTGCAGGAGTTCATCAACCCGTTTCTCTACCACGGGA
GGAAAACGCACATGCGGCCCATCACGCTATTCATCATTCAGCCCGACGGC
ACGAGAGAGTTCTTTATCTACAACAAGATGAGGGTGTTCACCGCGGCCGA
GGACTTCGACGAGGATCGGCTGCTGGAGGGCGGGGATAACTCGTTCATGC
TCTTGAGCAACATGCATCAGAACAAGCTCCTGTTCGAGAGGGACCCCAAG
AACGCGGGGAAGAGGTTCGAGTCCACCGAGTGCGTCCTGGACGCGGAAAC
CGTCTTGAGCTCTGCCGACAGCGATCTTTCCTTCGACAAGGTGTTCAGCG
ACTCGAAGGAGATGCACTCCATCATTTATTCCATCATTGGAGACCTGCTC
GAGTGCGAGGGGACGAGCGTATCTCTGTACGATAATGCCTGTTTTCACAT
CATGGCCTCAGACGTGGCGTTTGATAAATACGGCAAGCCCTACTTTCTAG
AGATGAACACCGCCATGGCTTACAATGGCGTCTGGACATACTTGCCCAGG
ACGTGGGTTGATATCGCTTCGTTTGAGAATGACGCGAACGAGAGCGACCT
GTACGTGTACAAGCCGGTTCTCGGGTTCGGGGGGGAAGGGATCGCGTTCG
AGCGCGGCGATCGACTGGTGCGACGCCTTCGGGAGCAGCAGCCGGCTGGT
AACTGGGTCGTGCAGGAGTTCATCAACCCGTTTCTCTACCACGGGAGGAA
AACGCACATGCGGCCCATCACGCTATTCATCATTCAGCCCGACGGCACGA
GAGAGTTCTTTATCTACAACAAGATGAGGGTGTTCACCGCGGCCGAGGAC
TTCGACGAGGATCGGCTGCTGGAGGGCGGGGATAACTCGTTCATGCTCTT
GAGCAACATGCATCAGAACAAGCTCCTGTTCGAGAGGGACCCCAAGAACG
CGGGGAAGAGGTTCGAGTCCACCGAGTGCGTCCTGGACGCGGAAACCGTC
TTGAGCTCTGCCGACAGCGATCTTTCCTTCGACAAGGTGTTCAGCGACTC
GAAGGAGATGCACTCCATCATTTATTCCATCATTGGAGACCTGCTCGAGT
GCGAGGGGACGAGCGTATCTCTGTACGATAATGCCTGTTTTCACATCATG
GCCTCAGACGTGGCGTTTGATAAATACGGCAAGCCCTACTTTCTAGAGAT
GAACACCGCCATGGCTTACAATGGCGTCTGGACA back to top
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