prot_L-elsbetiae_contig1967.5867.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1967.5867.1
Unique Nameprot_L-elsbetiae_contig1967.5867.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length87
Homology
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BLAST of mRNA_L-elsbetiae_contig1967.5867.1 vs. uniprot
Match: D7FZC5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZC5_ECTSI)

HSP 1 Score: 57.8 bits (138), Expect = 9.190e-8
Identity = 24/35 (68.57%), Postives = 30/35 (85.71%), Query Frame = 0 
Query:   32 SRTRRMCNPRCLDELLDCLVEHRNEDGRPMLYLND 66
            +R   +CNPRCLDELLD LVE+R++DGRP+LY ND
Sbjct:  842 ARVSGLCNPRCLDELLDSLVEYRDDDGRPILYFND 876
[Close]
BLAST of mRNA_L-elsbetiae_contig1967.5867.1 vs. uniprot
Match: A0A6H5JA82_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA82_9PHAE)

HSP 1 Score: 57.8 bits (138), Expect = 9.260e-8
Identity = 24/35 (68.57%), Postives = 30/35 (85.71%), Query Frame = 0 
Query:   32 SRTRRMCNPRCLDELLDCLVEHRNEDGRPMLYLND 66
            +R   +CNPRCLDELLD LVE+R++DGRP+LY ND
Sbjct:  874 ARVAGLCNPRCLDELLDSLVEYRDDDGRPILYFND 908
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1967.5867.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FZC5_ECTSI9.190e-868.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JA82_9PHAE9.260e-868.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1967contigL-elsbetiae_contig1967:12364..13083 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1967.5867.1mRNA_L-elsbetiae_contig1967.5867.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1967 12364..13084 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1967.5867.1 ID=prot_L-elsbetiae_contig1967.5867.1|Name=mRNA_L-elsbetiae_contig1967.5867.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=87bp
PSGSEGGEEAKVDAEEEGAGGGGAAAARGVESRTRRMCNPRCLDELLDCL
VEHRNEDGRPMLYLNDEAKAVVAGGGGGGGGGGSSDD
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