prot_L-elsbetiae_contig19561.5826.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig19561.5826.1
Unique Nameprot_L-elsbetiae_contig19561.5826.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length474
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig19561.5826.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 429..464
NoneNo IPR availableCOILSCoilCoilcoord: 353..373
NoneNo IPR availablePRINTSPR01217PRICHEXTENSNcoord: 17..33
score: 43.53
coord: 147..164
score: 28.89
coord: 40..52
score: 46.15
coord: 117..133
score: 38.82
coord: 259..271
score: 52.31

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig19561contigL-elsbetiae_contig19561:344..1765 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig19561.5826.1mRNA_L-elsbetiae_contig19561.5826.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig19561 344..1766 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig19561.5826.1 ID=prot_L-elsbetiae_contig19561.5826.1|Name=mRNA_L-elsbetiae_contig19561.5826.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=474bp
AVAEPAPPEAAGQQLPGPPPTPTVPTIPAAPCQNGENGSTAPPTATSAPT
APCIAEEKPSEGTATADKTIAGSPFPGHVGVATSSLEKAVAAAAEAVTAA
AEQAEGEITASTPAGCPAQKPAPVTGTEANTAPVTEAVTVAAAGISTSSP
TAATIPPATPTTSGPDAGGGGPSMPVAQPVVATVAAAPVGSAAVPAPQTA
TAVAATHPSGGGPGVAAGAATSSSTCSIAAMGAAPGVFADISAFAEESSG
ISFRNSLPPPPPPPSPPPPTSSLPAAPSVATTTPPACPPAPAPAPAPAPV
PSAADQSQGGGLAAAAGLLLVHHAGAAAAAASAAVAQQAVGAVAVTAETQ
EPEQQQQQQQQQQQDMRLELEQQVRPMAVQGQETGEEKQVQGSQQPGFEE
GHASGPAAATAQASAADAQESRGRPGVNKRKARGKRPQQQEEEEEEEEEE
GKEENEDIDAERGEEERVAQAGGE
back to top