prot_L-elsbetiae_contig1951.5803.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1951.5803.1
Unique Nameprot_L-elsbetiae_contig1951.5803.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length94
Homology
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BLAST of mRNA_L-elsbetiae_contig1951.5803.1 vs. uniprot
Match: A0A6H5JB60_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB60_9PHAE)

HSP 1 Score: 143 bits (360), Expect = 1.050e-37
Identity = 69/89 (77.53%), Postives = 75/89 (84.27%), Query Frame = 0 
Query:    2 KGHQSQQTLSRSLLWEPCPGAGLLIAGGDERTNQPWIWDASSGDVCNRLASHRSPVLDVASLCLQDGSSGTGLFAAVSQGEMNVYQTRA 90
            +GHQSQ TLSRSLLW+P PG GLLIAGGDERT QPW+WDA +GDVCNRLASHRSPVLD A  CLQD SSG GL +AVSQ E+ VYQT A
Sbjct:  697 QGHQSQHTLSRSLLWDPSPGDGLLIAGGDERTKQPWMWDALTGDVCNRLASHRSPVLDFA--CLQDYSSGKGLLSAVSQSEIKVYQTCA 783
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BLAST of mRNA_L-elsbetiae_contig1951.5803.1 vs. uniprot
Match: D8LKW0_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKW0_ECTSI)

HSP 1 Score: 63.2 bits (152), Expect = 1.460e-9
Identity = 28/34 (82.35%), Postives = 30/34 (88.24%), Query Frame = 0 
Query:    2 KGHQSQQTLSRSLLWEPCPGAGLLIAGGDERTNQ 35
            +GHQSQ TLSRSLLW+P PG GLLIAGGDERT Q
Sbjct:  623 QGHQSQHTLSRSLLWDPSPGDGLLIAGGDERTKQ 656
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1951.5803.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JB60_9PHAE1.050e-3777.53RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D8LKW0_ECTSI1.460e-982.35RING-type domain-containing protein n=1 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1951contigL-elsbetiae_contig1951:11503..13797 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1951.5803.1mRNA_L-elsbetiae_contig1951.5803.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1951 10950..14486 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1951.5803.1 ID=prot_L-elsbetiae_contig1951.5803.1|Name=mRNA_L-elsbetiae_contig1951.5803.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=94bp
MKGHQSQQTLSRSLLWEPCPGAGLLIAGGDERTNQPWIWDASSGDVCNRL
ASHRSPVLDVASLCLQDGSSGTGLFAAVSQGEMNVYQTRASDE*
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