prot_L-elsbetiae_contig1949.5792.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1949.5792.1
Unique Nameprot_L-elsbetiae_contig1949.5792.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length225
Homology
BLAST of mRNA_L-elsbetiae_contig1949.5792.1 vs. uniprot
Match: D8LUB7_ECTSI (Intraflagellar transport protein 172 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LUB7_ECTSI)

HSP 1 Score: 442 bits (1137), Expect = 2.640e-141
Identity = 211/224 (94.20%), Postives = 216/224 (96.43%), Query Frame = 0
Query:    1 MQLRHLNTLTQPTAGEGSDDVKMSKVMAVAWAPNNRKLAVCTADRVVSLYDENGEKRDRFSTKPAEKGPKIYIVRDLCFSPDSTRLAVAQSDSIVFVYKLGLEWGESKSICNKFPQSSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNKPATLYNVDSFCASLATSPDGNGVVSAHADGTLYRFLFDDNGAPSHTKLVIHPSVPYALSWGISIVAAGNDGQV 224
            MQLRHLNT+ QP  GEG D  KMSKVMAVAWAPNNRKLAVCTADRVV+LYDENGEKRDRFSTKPAEKGPK YIVRDLCFSPDSTRLAVAQSDSIVFVYKLGLEWGESKSICNKFPQ SPITCMSWPEARPNEVVFGLAEGKVKIGQLKSN+PATLYNVDSFCA+LATSPDGNGVVSAHADGTLYRFLFDDNGAPSHTKLVIHPSVPYALSWG+SIVAAGNDGQV
Sbjct:    1 MQLRHLNTIIQPATGEGGDGAKMSKVMAVAWAPNNRKLAVCTADRVVALYDENGEKRDRFSTKPAEKGPKNYIVRDLCFSPDSTRLAVAQSDSIVFVYKLGLEWGESKSICNKFPQPSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNRPATLYNVDSFCAALATSPDGNGVVSAHADGTLYRFLFDDNGAPSHTKLVIHPSVPYALSWGLSIVAAGNDGQV 224          
BLAST of mRNA_L-elsbetiae_contig1949.5792.1 vs. uniprot
Match: A0A6H5KMU1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMU1_9PHAE)

HSP 1 Score: 366 bits (940), Expect = 5.620e-124
Identity = 174/182 (95.60%), Postives = 179/182 (98.35%), Query Frame = 0
Query:   43 ADRVVSLYDENGEKRDRFSTKPAEKGPKIYIVRDLCFSPDSTRLAVAQSDSIVFVYKLGLEWGESKSICNKFPQSSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNKPATLYNVDSFCASLATSPDGNGVVSAHADGTLYRFLFDDNGAPSHTKLVIHPSVPYALSWGISIVAAGNDGQV 224
            ADRVV+LYDENGEKRDRFSTKPAEKGPK YIVRDLCFSPDS RLAVAQSDSIVFVYKLGLEWGESKSICNKFPQ SPITCMSWPEARPNEVVFGLAEGKVKIGQLKSN+PATLYNVDSFCA+LATSPDGNGVVSAHADGTLYRFLFDDNGAPSHTKLVIHPSVP+ALSWG+SIVAAGNDGQV
Sbjct:    2 ADRVVALYDENGEKRDRFSTKPAEKGPKNYIVRDLCFSPDSARLAVAQSDSIVFVYKLGLEWGESKSICNKFPQPSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNRPATLYNVDSFCAALATSPDGNGVVSAHADGTLYRFLFDDNGAPSHTKLVIHPSVPFALSWGLSIVAAGNDGQV 183          
BLAST of mRNA_L-elsbetiae_contig1949.5792.1 vs. uniprot
Match: A0A835YVD3_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVD3_9STRA)

HSP 1 Score: 317 bits (812), Expect = 1.160e-100
Identity = 153/225 (68.00%), Postives = 177/225 (78.67%), Query Frame = 0
Query:    1 MQLRHLNTLTQPTAGEGSDDVKMSKVMAVAWAPNNRKLAVCTADRVVSLYDENGEKRDRFSTKPAEKGPKIYIVRDLCFSPDSTRLAVAQSDSIVFVYKLGLEWGESKSICNKFPQSSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNKPATLYNVDSFCASLATSPDGNGVVSAHADGTLYRFLFDDNGA-PSHTKLVIHPSVPYALSWGISIVAAGNDGQV 224
            MQLRHL T+  P  GEG   + + KV A+AWAPNNRKLAVCTADRVV+L+DENGEKRD+FSTKPA+KGPK Y+VR +                  FVYKLG EWGE KSICNKFPQ SP+T ++W +ARPN++VFGLA+GKVKIGQL++NKPATLYN DSF A+LA S DGNGVVSAHADG +YRFLFDD+G  PSH +L +HP VPYALSWG SIVAAGND QV
Sbjct:    1 MQLRHLQTVLAPP-GEGGS-LPLQKVTAIAWAPNNRKLAVCTADRVVTLFDENGEKRDKFSTKPADKGPKNYMVRAMXXXXXXXXXXXXXXXXXXFVYKLGAEWGEKKSICNKFPQPSPVTALTWADARPNDIVFGLADGKVKIGQLRTNKPATLYNADSFVAALAASADGNGVVSAHADGAIYRFLFDDSGGGPSHARLAVHPCVPYALSWGRSIVAAGNDCQV 223          
BLAST of mRNA_L-elsbetiae_contig1949.5792.1 vs. uniprot
Match: A0A6A4ZTU4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZTU4_9STRA)

HSP 1 Score: 280 bits (717), Expect = 5.640e-91
Identity = 137/240 (57.08%), Postives = 179/240 (74.58%), Query Frame = 0
Query:    1 MQLRHLNTLTQPTAGEGSDDVKMSKVMAVAWAPNNRKLAVCTADRVVSLYDE-NGEKRDRFSTKPAEK-------------GPKIYIVRDLCFSPDSTRLAVAQSDSIVFVYKLGLEWGESKSICNKFPQSSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNKPATLYNVDSFCASLATSPDGNGVVSAHADGTLYRFLFDD-NGAPSHTKLVIHPSVPYALSWGISIVAAGNDGQVT 225
            MQLRHL+T+  PT G       M KV A+AW+PNNR+LAV T +RVV ++D   GE++D+FSTKPAEK             G K Y+V+ L FSPDS++LAVAQSD+IVF+YKLGL+WG+ KSICNKF Q++ +T M WP + PNE+VFGL++GKVK+GQL+SNKPATLY   S+ ++L T+ +G  ++S+H D ++YRF+FDD NG  S TK+ IH  VPYALSWG +IVAAGND +VT
Sbjct:    1 MQLRHLSTVLPPTEG-------MCKVTAIAWSPNNRRLAVVTVERVVHMFDAATGERKDKFSTKPAEKVPPATTAMYLACVGDKNYLVKALAFSPDSSKLAVAQSDNIVFIYKLGLDWGDKKSICNKFLQTASVTSMVWPTSHPNEIVFGLSDGKVKLGQLRSNKPATLYATGSYVSTLCTNVEGTAILSSHYDHSIYRFIFDDVNGGSSQTKIAIHSCVPYALSWGEAIVAAGNDRKVT 233          
BLAST of mRNA_L-elsbetiae_contig1949.5792.1 vs. uniprot
Match: A0A1V9ZC42_9STRA (Intraflagellar Transport Protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZC42_9STRA)

HSP 1 Score: 300 bits (769), Expect = 2.100e-90
Identity = 142/227 (62.56%), Postives = 181/227 (79.74%), Query Frame = 0
Query:    1 MQLRHLNTLTQPTAGEGSDDVKMSKVMAVAWAPNNRKLAVCTADRVVSLYDE-NGEKRDRFSTKPAEKGPKIYIVRDLCFSPDSTRLAVAQSDSIVFVYKLGLEWGESKSICNKFPQSSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNKPATLYNVDSFCASLATSPDGNGVVSAHADGTLYRFLFDD-NGAPSHTKLVIHPSVPYALSWGISIVAAGNDGQVT 225
            MQLRHL+T+  PT G       M KV A+AW+PNNR+LAV T +RVV ++D   GE++D+FSTKPAEKG K Y+VR L FSPDS++LAVAQSD+IVF+YKLGLEWG+ KSICNKF Q+S +T M WP A PNE+VFGLA+GKVK+GQL+SNKPATLY+  S+ A++ T+P+G  ++S+H D ++YRF+FDD NG  + TK+ +H  VPYALSWG SIVAAGND +VT
Sbjct:  978 MQLRHLSTVLPPTEG-------MCKVTAIAWSPNNRRLAVVTVERVVHMFDAATGERKDKFSTKPAEKGDKNYVVRALAFSPDSSKLAVAQSDNIVFIYKLGLEWGDKKSICNKFAQASSVTSMIWPVAHPNEIVFGLADGKVKLGQLRSNKPATLYSTGSYVATMCTNPEGTAILSSHYDQSIYRFIFDDVNGGSTQTKIALHTCVPYALSWGESIVAAGNDRKVT 1197          
BLAST of mRNA_L-elsbetiae_contig1949.5792.1 vs. uniprot
Match: A0A813BFQ9_9DINO (IFT172 protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813BFQ9_9DINO)

HSP 1 Score: 279 bits (713), Expect = 4.300e-89
Identity = 125/204 (61.27%), Postives = 164/204 (80.39%), Query Frame = 0
Query:   23 MSKVMAVAWAPNNRKLAVCTADRVVSLYDENGEKRDRFSTKPAEKGPKIYIVRDLCFSPDSTRLAVAQSDSIVFVYKLGLEWGESKSICNKFPQSSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNKPATLYNVDSFCASLATSPDGNGVVSAHADGTLYRFLFDDNG-APSHTKLVIHPSVPYALSWGISIVAAGNDGQVT 225
            M KV AV W+PNNR+LA+ T D+VV L+DENGE+RD+FSTKPA+K  K Y++  + FSPDS++LAVAQSD+IVFVYKLGLEWG+ K+ICNKF Q+S +T ++WP+A PNEV FGL +GKVKIGQL++NK ATLY  DSF  S+ +SPDG+ ++S H DG++YRF F + G  P+  K  +H +VPYALSWG S++AAGND +V+
Sbjct:    1 MCKVTAVCWSPNNRRLAIVTVDKVVHLFDENGERRDKFSTKPADKTNKSYMITGMSFSPDSSKLAVAQSDNIVFVYKLGLEWGDKKTICNKFLQTSSVTALTWPKAHPNEVAFGLQDGKVKIGQLRNNKAATLYTTDSFTVSMCSSPDGHALLSGHLDGSIYRFHFGEGGQGPAQGKFAVHSAVPYALSWGASVLAAGNDRKVS 204          
BLAST of mRNA_L-elsbetiae_contig1949.5792.1 vs. uniprot
Match: A0A0P1AMT9_PLAHL (Intraflagellar transport protein 172 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AMT9_PLAHL)

HSP 1 Score: 296 bits (757), Expect = 8.230e-89
Identity = 141/227 (62.11%), Postives = 179/227 (78.85%), Query Frame = 0
Query:    1 MQLRHLNTLTQPTAGEGSDDVKMSKVMAVAWAPNNRKLAVCTADRVVSLYD-ENGEKRDRFSTKPAEKGPKIYIVRDLCFSPDSTRLAVAQSDSIVFVYKLGLEWGESKSICNKFPQSSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNKPATLYNVDSFCASLATSPDGNGVVSAHADGTLYRFLFDD-NGAPSHTKLVIHPSVPYALSWGISIVAAGNDGQVT 225
            MQLRHL +L Q T G       M KV A+A++PNNR+LAV T DRVV L+D + GE++D+FSTKPA+KG K YIVR L FSPDS +LAVAQSD+I+FVYK+GLE+G+ KSICNKFPQ+S +T ++WP   PNE+VFGLA+GKVKIG L+SNKPATLY   S+ + + ++PDG  ++SAH DG +YRF+FDD  G P+H KLV+H  +PYALSWG SIVAAGND +V+
Sbjct:    1 MQLRHLTSLLQATEG-------MCKVTAIAYSPNNRRLAVVTVDRVVHLFDGQTGERKDKFSTKPADKGDKHYIVRALEFSPDSCKLAVAQSDNIIFVYKIGLEFGDKKSICNKFPQTSSVTSLTWPSTHPNEIVFGLADGKVKIGHLRSNKPATLYATGSYVSQVCSNPDGTAILSAHYDGAIYRFIFDDVTGGPTHAKLVVHSCIPYALSWGDSIVAAGNDRRVS 220          
BLAST of mRNA_L-elsbetiae_contig1949.5792.1 vs. uniprot
Match: A0A7S0RE83_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0RE83_9CHLO)

HSP 1 Score: 277 bits (709), Expect = 3.270e-88
Identity = 135/228 (59.21%), Postives = 170/228 (74.56%), Query Frame = 0
Query:    1 MQLRHLNTLTQPTAGEGSDDVKMSKVMAVAWAPNNRKLAVCTADRVVSLYDENGEKRDRFSTKPAE-KGPKIYIVRDLCFSPDSTRLAVAQSDSIVFVYKLGLEWGESKSICNKFPQSSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNKPATLYNV--DSFCASLATSPDGNGVVSAHADGTLYRFLFDDNG-APSHTKLVIHPSVPYALSWGISIVAAGNDGQV 224
            MQLRHL     PT G       +SKV  + W+ N+R++AV T DR+V L+DENG+++D+FSTKPA+  G K Y+VR + FSPDS++LA+ QSD+IVFVYKLG EWG+ KSICNKF QSS ITC++WP  + +EVVFGLAEGKVK+GQL+SNKPATLY     S+  SL +SPDG  ++S H DGT+YRF FDD    PS++KL  HP VPYALSWG SI  AG+D +V
Sbjct:    1 MQLRHLKCALPPTEG-------ISKVTTITWSSNSRRMAVVTTDRIVHLFDENGDRKDKFSTKPADPSGAKNYVVRGMAFSPDSSKLAIGQSDNIVFVYKLGTEWGDKKSICNKFHQSSAITCITWPHQQHHEVVFGLAEGKVKVGQLRSNKPATLYAHPDQSYVVSLCSSPDGRAILSGHLDGTIYRFYFDDGVLGPSNSKLTTHPVVPYALSWGESICVAGSDCKV 221          
BLAST of mRNA_L-elsbetiae_contig1949.5792.1 vs. uniprot
Match: A0A397EVR2_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397EVR2_9STRA)

HSP 1 Score: 290 bits (741), Expect = 4.170e-88
Identity = 137/227 (60.35%), Postives = 179/227 (78.85%), Query Frame = 0
Query:    1 MQLRHLNTLTQPTAGEGSDDVKMSKVMAVAWAPNNRKLAVCTADRVVSLYDE-NGEKRDRFSTKPAEKGPKIYIVRDLCFSPDSTRLAVAQSDSIVFVYKLGLEWGESKSICNKFPQSSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNKPATLYNVDSFCASLATSPDGNGVVSAHADGTLYRFLFDD-NGAPSHTKLVIHPSVPYALSWGISIVAAGNDGQVT 225
            MQLRHL+T+  PT G       M KV A+AW+PNNR+LAV T +RVV ++D   GE++D+FSTKPAEKG K Y+V+ L FSPDS++LAVAQSD+IVF+YKLGL+WG+ KSICNKF Q++ +T M WP + PNE+VFGL++GKVK+GQL+SNKPATLY   S+ ++L T+ +G  ++S+H D ++YRF+FDD NG  S TK+ IH  VPYALSWG +IVAAGND +VT
Sbjct:    1 MQLRHLSTVLPPTEG-------MCKVTAIAWSPNNRRLAVVTVERVVHMFDAATGERKDKFSTKPAEKGDKNYLVKALAFSPDSSKLAVAQSDNIVFIYKLGLDWGDKKSICNKFLQTASVTSMVWPTSHPNEIVFGLSDGKVKLGQLRSNKPATLYATGSYVSTLCTNVEGTAILSSHYDHSIYRFIFDDVNGGSSQTKIAIHSCVPYALSWGEAIVAAGNDRKVT 220          
BLAST of mRNA_L-elsbetiae_contig1949.5792.1 vs. uniprot
Match: A0A8K1FJC7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FJC7_PYTOL)

HSP 1 Score: 293 bits (749), Expect = 9.840e-88
Identity = 137/226 (60.62%), Postives = 180/226 (79.65%), Query Frame = 0
Query:    1 MQLRHLNTLTQPTAGEGSDDVKMSKVMAVAWAPNNRKLAVCTADRVVSLYD-ENGEKRDRFSTKPAEKGPKIYIVRDLCFSPDSTRLAVAQSDSIVFVYKLGLEWGESKSICNKFPQSSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNKPATLYNVDSFCASLATSPDGNGVVSAHADGTLYRFLFDD-NGAPSHTKLVIHPSVPYALSWGISIVAAGNDGQV 224
            MQLRHL +L   T G       M KV AVAW+PNN++LAV T DRVV ++D + GE++D+FSTKPA+KG K YIVR+L FSPDS++LAVAQSD+IVF+YK+GL+WG+ KSICNKFPQS+ IT ++WP   PNE+VFGLA+GKVKIGQL+SNKPATLY   S+ +++ ++ +G  ++S H DG+++RF+FDD  G P++TK+ +H  VPYALSWG SIVAAGND +V
Sbjct:    1 MQLRHLTSLLPATEG-------MCKVTAVAWSPNNKRLAVVTVDRVVHMFDAQTGERKDKFSTKPADKGEKNYIVRELVFSPDSSKLAVAQSDNIVFIYKIGLDWGDKKSICNKFPQSTSITALTWPNTHPNEIVFGLADGKVKIGQLRSNKPATLYASGSYVSTVCSNMEGTAILSGHYDGSIFRFVFDDVTGGPTNTKITVHSCVPYALSWGESIVAAGNDRRV 219          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1949.5792.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LUB7_ECTSI2.640e-14194.20Intraflagellar transport protein 172 n=1 Tax=Ectoc... [more]
A0A6H5KMU1_9PHAE5.620e-12495.60Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A835YVD3_9STRA1.160e-10068.00Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
A0A6A4ZTU4_9STRA5.640e-9157.08Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A1V9ZC42_9STRA2.100e-9062.56Intraflagellar Transport Protein n=1 Tax=Thraustot... [more]
A0A813BFQ9_9DINO4.300e-8961.27IFT172 protein (Fragment) n=1 Tax=Symbiodinium sp.... [more]
A0A0P1AMT9_PLAHL8.230e-8962.11Intraflagellar transport protein 172 n=1 Tax=Plasm... [more]
A0A7S0RE83_9CHLO3.270e-8859.21Hypothetical protein (Fragment) n=1 Tax=Pyramimona... [more]
A0A397EVR2_9STRA4.170e-8860.35Uncharacterized protein (Fragment) n=2 Tax=Aphanom... [more]
A0A8K1FJC7_PYTOL9.840e-8860.62Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 107..146
e-value: 230.0
score: 2.1
coord: 56..99
e-value: 3.3
score: 13.8
coord: 2..51
e-value: 0.087
score: 21.9
coord: 148..187
e-value: 10.0
score: 10.7
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 6..225
e-value: 1.1E-22
score: 82.4
NoneNo IPR availablePANTHERPTHR15722:SF2INTRAFLAGELLAR TRANSPORT PROTEIN 172 HOMOLOGcoord: 1..225
NoneNo IPR availablePANTHERPTHR15722IFT140/172-RELATEDcoord: 1..225
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 24..224

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1949contigL-elsbetiae_contig1949:21010..22646 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1949.5792.1mRNA_L-elsbetiae_contig1949.5792.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1949 21010..22646 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1949.5792.1 ID=prot_L-elsbetiae_contig1949.5792.1|Name=mRNA_L-elsbetiae_contig1949.5792.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=225bp
MQLRHLNTLTQPTAGEGSDDVKMSKVMAVAWAPNNRKLAVCTADRVVSLY
DENGEKRDRFSTKPAEKGPKIYIVRDLCFSPDSTRLAVAQSDSIVFVYKL
GLEWGESKSICNKFPQSSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSN
KPATLYNVDSFCASLATSPDGNGVVSAHADGTLYRFLFDDNGAPSHTKLV
IHPSVPYALSWGISIVAAGNDGQVT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR036322WD40_repeat_dom_sf