mRNA_L-elsbetiae_contig1949.5792.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1949.5792.1 vs. uniprot
Match: D8LUB7_ECTSI (Intraflagellar transport protein 172 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LUB7_ECTSI) HSP 1 Score: 442 bits (1137), Expect = 2.640e-141 Identity = 211/224 (94.20%), Postives = 216/224 (96.43%), Query Frame = 1 Query: 1 MQLRHLNTLTQPTAGEGSDDVKMSKVMAVAWAPNNRKLAVCTADRVVSLYDENGEKRDRFSTKPAEKGPKIYIVRDLCFSPDSTRLAVAQSDSIVFVYKLGLEWGESKSICNKFPQSSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNKPATLYNVDSFCASLATSPDGNGVVSAHADGTLYRFLFDDNGAPSHTKLVIHPSVPYALSWGISIVAAGNDGQV 672 MQLRHLNT+ QP GEG D KMSKVMAVAWAPNNRKLAVCTADRVV+LYDENGEKRDRFSTKPAEKGPK YIVRDLCFSPDSTRLAVAQSDSIVFVYKLGLEWGESKSICNKFPQ SPITCMSWPEARPNEVVFGLAEGKVKIGQLKSN+PATLYNVDSFCA+LATSPDGNGVVSAHADGTLYRFLFDDNGAPSHTKLVIHPSVPYALSWG+SIVAAGNDGQV Sbjct: 1 MQLRHLNTIIQPATGEGGDGAKMSKVMAVAWAPNNRKLAVCTADRVVALYDENGEKRDRFSTKPAEKGPKNYIVRDLCFSPDSTRLAVAQSDSIVFVYKLGLEWGESKSICNKFPQPSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNRPATLYNVDSFCAALATSPDGNGVVSAHADGTLYRFLFDDNGAPSHTKLVIHPSVPYALSWGLSIVAAGNDGQV 224
BLAST of mRNA_L-elsbetiae_contig1949.5792.1 vs. uniprot
Match: A0A6H5KMU1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMU1_9PHAE) HSP 1 Score: 366 bits (940), Expect = 5.620e-124 Identity = 174/182 (95.60%), Postives = 179/182 (98.35%), Query Frame = 1 Query: 127 ADRVVSLYDENGEKRDRFSTKPAEKGPKIYIVRDLCFSPDSTRLAVAQSDSIVFVYKLGLEWGESKSICNKFPQSSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNKPATLYNVDSFCASLATSPDGNGVVSAHADGTLYRFLFDDNGAPSHTKLVIHPSVPYALSWGISIVAAGNDGQV 672 ADRVV+LYDENGEKRDRFSTKPAEKGPK YIVRDLCFSPDS RLAVAQSDSIVFVYKLGLEWGESKSICNKFPQ SPITCMSWPEARPNEVVFGLAEGKVKIGQLKSN+PATLYNVDSFCA+LATSPDGNGVVSAHADGTLYRFLFDDNGAPSHTKLVIHPSVP+ALSWG+SIVAAGNDGQV Sbjct: 2 ADRVVALYDENGEKRDRFSTKPAEKGPKNYIVRDLCFSPDSARLAVAQSDSIVFVYKLGLEWGESKSICNKFPQPSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNRPATLYNVDSFCAALATSPDGNGVVSAHADGTLYRFLFDDNGAPSHTKLVIHPSVPFALSWGLSIVAAGNDGQV 183
BLAST of mRNA_L-elsbetiae_contig1949.5792.1 vs. uniprot
Match: A0A835YVD3_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVD3_9STRA) HSP 1 Score: 317 bits (812), Expect = 1.160e-100 Identity = 153/225 (68.00%), Postives = 177/225 (78.67%), Query Frame = 1 Query: 1 MQLRHLNTLTQPTAGEGSDDVKMSKVMAVAWAPNNRKLAVCTADRVVSLYDENGEKRDRFSTKPAEKGPKIYIVRDLCFSPDSTRLAVAQSDSIVFVYKLGLEWGESKSICNKFPQSSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNKPATLYNVDSFCASLATSPDGNGVVSAHADGTLYRFLFDDNGA-PSHTKLVIHPSVPYALSWGISIVAAGNDGQV 672 MQLRHL T+ P GEG + + KV A+AWAPNNRKLAVCTADRVV+L+DENGEKRD+FSTKPA+KGPK Y+VR + FVYKLG EWGE KSICNKFPQ SP+T ++W +ARPN++VFGLA+GKVKIGQL++NKPATLYN DSF A+LA S DGNGVVSAHADG +YRFLFDD+G PSH +L +HP VPYALSWG SIVAAGND QV Sbjct: 1 MQLRHLQTVLAPP-GEGGS-LPLQKVTAIAWAPNNRKLAVCTADRVVTLFDENGEKRDKFSTKPADKGPKNYMVRAMXXXXXXXXXXXXXXXXXXFVYKLGAEWGEKKSICNKFPQPSPVTALTWADARPNDIVFGLADGKVKIGQLRTNKPATLYNADSFVAALAASADGNGVVSAHADGAIYRFLFDDSGGGPSHARLAVHPCVPYALSWGRSIVAAGNDCQV 223
BLAST of mRNA_L-elsbetiae_contig1949.5792.1 vs. uniprot
Match: A0A6A4ZTU4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZTU4_9STRA) HSP 1 Score: 280 bits (717), Expect = 5.640e-91 Identity = 137/240 (57.08%), Postives = 179/240 (74.58%), Query Frame = 1 Query: 1 MQLRHLNTLTQPTAGEGSDDVKMSKVMAVAWAPNNRKLAVCTADRVVSLYDE-NGEKRDRFSTKPAEK-------------GPKIYIVRDLCFSPDSTRLAVAQSDSIVFVYKLGLEWGESKSICNKFPQSSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNKPATLYNVDSFCASLATSPDGNGVVSAHADGTLYRFLFDD-NGAPSHTKLVIHPSVPYALSWGISIVAAGNDGQVT 675 MQLRHL+T+ PT G M KV A+AW+PNNR+LAV T +RVV ++D GE++D+FSTKPAEK G K Y+V+ L FSPDS++LAVAQSD+IVF+YKLGL+WG+ KSICNKF Q++ +T M WP + PNE+VFGL++GKVK+GQL+SNKPATLY S+ ++L T+ +G ++S+H D ++YRF+FDD NG S TK+ IH VPYALSWG +IVAAGND +VT Sbjct: 1 MQLRHLSTVLPPTEG-------MCKVTAIAWSPNNRRLAVVTVERVVHMFDAATGERKDKFSTKPAEKVPPATTAMYLACVGDKNYLVKALAFSPDSSKLAVAQSDNIVFIYKLGLDWGDKKSICNKFLQTASVTSMVWPTSHPNEIVFGLSDGKVKLGQLRSNKPATLYATGSYVSTLCTNVEGTAILSSHYDHSIYRFIFDDVNGGSSQTKIAIHSCVPYALSWGEAIVAAGNDRKVT 233
BLAST of mRNA_L-elsbetiae_contig1949.5792.1 vs. uniprot
Match: A0A1V9ZC42_9STRA (Intraflagellar Transport Protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZC42_9STRA) HSP 1 Score: 300 bits (769), Expect = 2.100e-90 Identity = 142/227 (62.56%), Postives = 181/227 (79.74%), Query Frame = 1 Query: 1 MQLRHLNTLTQPTAGEGSDDVKMSKVMAVAWAPNNRKLAVCTADRVVSLYDE-NGEKRDRFSTKPAEKGPKIYIVRDLCFSPDSTRLAVAQSDSIVFVYKLGLEWGESKSICNKFPQSSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNKPATLYNVDSFCASLATSPDGNGVVSAHADGTLYRFLFDD-NGAPSHTKLVIHPSVPYALSWGISIVAAGNDGQVT 675 MQLRHL+T+ PT G M KV A+AW+PNNR+LAV T +RVV ++D GE++D+FSTKPAEKG K Y+VR L FSPDS++LAVAQSD+IVF+YKLGLEWG+ KSICNKF Q+S +T M WP A PNE+VFGLA+GKVK+GQL+SNKPATLY+ S+ A++ T+P+G ++S+H D ++YRF+FDD NG + TK+ +H VPYALSWG SIVAAGND +VT Sbjct: 978 MQLRHLSTVLPPTEG-------MCKVTAIAWSPNNRRLAVVTVERVVHMFDAATGERKDKFSTKPAEKGDKNYVVRALAFSPDSSKLAVAQSDNIVFIYKLGLEWGDKKSICNKFAQASSVTSMIWPVAHPNEIVFGLADGKVKLGQLRSNKPATLYSTGSYVATMCTNPEGTAILSSHYDQSIYRFIFDDVNGGSTQTKIALHTCVPYALSWGESIVAAGNDRKVT 1197
BLAST of mRNA_L-elsbetiae_contig1949.5792.1 vs. uniprot
Match: A0A813BFQ9_9DINO (IFT172 protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813BFQ9_9DINO) HSP 1 Score: 279 bits (713), Expect = 4.300e-89 Identity = 125/204 (61.27%), Postives = 164/204 (80.39%), Query Frame = 1 Query: 67 MSKVMAVAWAPNNRKLAVCTADRVVSLYDENGEKRDRFSTKPAEKGPKIYIVRDLCFSPDSTRLAVAQSDSIVFVYKLGLEWGESKSICNKFPQSSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNKPATLYNVDSFCASLATSPDGNGVVSAHADGTLYRFLFDDNG-APSHTKLVIHPSVPYALSWGISIVAAGNDGQVT 675 M KV AV W+PNNR+LA+ T D+VV L+DENGE+RD+FSTKPA+K K Y++ + FSPDS++LAVAQSD+IVFVYKLGLEWG+ K+ICNKF Q+S +T ++WP+A PNEV FGL +GKVKIGQL++NK ATLY DSF S+ +SPDG+ ++S H DG++YRF F + G P+ K +H +VPYALSWG S++AAGND +V+ Sbjct: 1 MCKVTAVCWSPNNRRLAIVTVDKVVHLFDENGERRDKFSTKPADKTNKSYMITGMSFSPDSSKLAVAQSDNIVFVYKLGLEWGDKKTICNKFLQTSSVTALTWPKAHPNEVAFGLQDGKVKIGQLRNNKAATLYTTDSFTVSMCSSPDGHALLSGHLDGSIYRFHFGEGGQGPAQGKFAVHSAVPYALSWGASVLAAGNDRKVS 204
BLAST of mRNA_L-elsbetiae_contig1949.5792.1 vs. uniprot
Match: A0A0P1AMT9_PLAHL (Intraflagellar transport protein 172 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AMT9_PLAHL) HSP 1 Score: 296 bits (757), Expect = 8.230e-89 Identity = 141/227 (62.11%), Postives = 179/227 (78.85%), Query Frame = 1 Query: 1 MQLRHLNTLTQPTAGEGSDDVKMSKVMAVAWAPNNRKLAVCTADRVVSLYD-ENGEKRDRFSTKPAEKGPKIYIVRDLCFSPDSTRLAVAQSDSIVFVYKLGLEWGESKSICNKFPQSSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNKPATLYNVDSFCASLATSPDGNGVVSAHADGTLYRFLFDD-NGAPSHTKLVIHPSVPYALSWGISIVAAGNDGQVT 675 MQLRHL +L Q T G M KV A+A++PNNR+LAV T DRVV L+D + GE++D+FSTKPA+KG K YIVR L FSPDS +LAVAQSD+I+FVYK+GLE+G+ KSICNKFPQ+S +T ++WP PNE+VFGLA+GKVKIG L+SNKPATLY S+ + + ++PDG ++SAH DG +YRF+FDD G P+H KLV+H +PYALSWG SIVAAGND +V+ Sbjct: 1 MQLRHLTSLLQATEG-------MCKVTAIAYSPNNRRLAVVTVDRVVHLFDGQTGERKDKFSTKPADKGDKHYIVRALEFSPDSCKLAVAQSDNIIFVYKIGLEFGDKKSICNKFPQTSSVTSLTWPSTHPNEIVFGLADGKVKIGHLRSNKPATLYATGSYVSQVCSNPDGTAILSAHYDGAIYRFIFDDVTGGPTHAKLVVHSCIPYALSWGDSIVAAGNDRRVS 220
BLAST of mRNA_L-elsbetiae_contig1949.5792.1 vs. uniprot
Match: A0A7S0RE83_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0RE83_9CHLO) HSP 1 Score: 277 bits (709), Expect = 3.270e-88 Identity = 135/228 (59.21%), Postives = 170/228 (74.56%), Query Frame = 1 Query: 1 MQLRHLNTLTQPTAGEGSDDVKMSKVMAVAWAPNNRKLAVCTADRVVSLYDENGEKRDRFSTKPAE-KGPKIYIVRDLCFSPDSTRLAVAQSDSIVFVYKLGLEWGESKSICNKFPQSSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNKPATLYNV--DSFCASLATSPDGNGVVSAHADGTLYRFLFDDNG-APSHTKLVIHPSVPYALSWGISIVAAGNDGQV 672 MQLRHL PT G +SKV + W+ N+R++AV T DR+V L+DENG+++D+FSTKPA+ G K Y+VR + FSPDS++LA+ QSD+IVFVYKLG EWG+ KSICNKF QSS ITC++WP + +EVVFGLAEGKVK+GQL+SNKPATLY S+ SL +SPDG ++S H DGT+YRF FDD PS++KL HP VPYALSWG SI AG+D +V Sbjct: 1 MQLRHLKCALPPTEG-------ISKVTTITWSSNSRRMAVVTTDRIVHLFDENGDRKDKFSTKPADPSGAKNYVVRGMAFSPDSSKLAIGQSDNIVFVYKLGTEWGDKKSICNKFHQSSAITCITWPHQQHHEVVFGLAEGKVKVGQLRSNKPATLYAHPDQSYVVSLCSSPDGRAILSGHLDGTIYRFYFDDGVLGPSNSKLTTHPVVPYALSWGESICVAGSDCKV 221
BLAST of mRNA_L-elsbetiae_contig1949.5792.1 vs. uniprot
Match: A0A397EVR2_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397EVR2_9STRA) HSP 1 Score: 290 bits (741), Expect = 4.170e-88 Identity = 137/227 (60.35%), Postives = 179/227 (78.85%), Query Frame = 1 Query: 1 MQLRHLNTLTQPTAGEGSDDVKMSKVMAVAWAPNNRKLAVCTADRVVSLYDE-NGEKRDRFSTKPAEKGPKIYIVRDLCFSPDSTRLAVAQSDSIVFVYKLGLEWGESKSICNKFPQSSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNKPATLYNVDSFCASLATSPDGNGVVSAHADGTLYRFLFDD-NGAPSHTKLVIHPSVPYALSWGISIVAAGNDGQVT 675 MQLRHL+T+ PT G M KV A+AW+PNNR+LAV T +RVV ++D GE++D+FSTKPAEKG K Y+V+ L FSPDS++LAVAQSD+IVF+YKLGL+WG+ KSICNKF Q++ +T M WP + PNE+VFGL++GKVK+GQL+SNKPATLY S+ ++L T+ +G ++S+H D ++YRF+FDD NG S TK+ IH VPYALSWG +IVAAGND +VT Sbjct: 1 MQLRHLSTVLPPTEG-------MCKVTAIAWSPNNRRLAVVTVERVVHMFDAATGERKDKFSTKPAEKGDKNYLVKALAFSPDSSKLAVAQSDNIVFIYKLGLDWGDKKSICNKFLQTASVTSMVWPTSHPNEIVFGLSDGKVKLGQLRSNKPATLYATGSYVSTLCTNVEGTAILSSHYDHSIYRFIFDDVNGGSSQTKIAIHSCVPYALSWGEAIVAAGNDRKVT 220
BLAST of mRNA_L-elsbetiae_contig1949.5792.1 vs. uniprot
Match: A0A8K1FJC7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FJC7_PYTOL) HSP 1 Score: 293 bits (749), Expect = 9.840e-88 Identity = 137/226 (60.62%), Postives = 180/226 (79.65%), Query Frame = 1 Query: 1 MQLRHLNTLTQPTAGEGSDDVKMSKVMAVAWAPNNRKLAVCTADRVVSLYD-ENGEKRDRFSTKPAEKGPKIYIVRDLCFSPDSTRLAVAQSDSIVFVYKLGLEWGESKSICNKFPQSSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNKPATLYNVDSFCASLATSPDGNGVVSAHADGTLYRFLFDD-NGAPSHTKLVIHPSVPYALSWGISIVAAGNDGQV 672 MQLRHL +L T G M KV AVAW+PNN++LAV T DRVV ++D + GE++D+FSTKPA+KG K YIVR+L FSPDS++LAVAQSD+IVF+YK+GL+WG+ KSICNKFPQS+ IT ++WP PNE+VFGLA+GKVKIGQL+SNKPATLY S+ +++ ++ +G ++S H DG+++RF+FDD G P++TK+ +H VPYALSWG SIVAAGND +V Sbjct: 1 MQLRHLTSLLPATEG-------MCKVTAVAWSPNNKRLAVVTVDRVVHMFDAQTGERKDKFSTKPADKGEKNYIVRELVFSPDSSKLAVAQSDNIVFIYKIGLDWGDKKSICNKFPQSTSITALTWPNTHPNEIVFGLADGKVKIGQLRSNKPATLYASGSYVSTVCSNMEGTAILSGHYDGSIFRFVFDDVTGGPTNTKITVHSCVPYALSWGESIVAAGNDRRV 219 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1949.5792.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1949.5792.1 >prot_L-elsbetiae_contig1949.5792.1 ID=prot_L-elsbetiae_contig1949.5792.1|Name=mRNA_L-elsbetiae_contig1949.5792.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=225bp MQLRHLNTLTQPTAGEGSDDVKMSKVMAVAWAPNNRKLAVCTADRVVSLYback to top mRNA from alignment at L-elsbetiae_contig1949:21010..22646+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1949.5792.1 ID=mRNA_L-elsbetiae_contig1949.5792.1|Name=mRNA_L-elsbetiae_contig1949.5792.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1637bp|location=Sequence derived from alignment at L-elsbetiae_contig1949:21010..22646+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1949:21010..22646+ >mRNA_L-elsbetiae_contig1949.5792.1 ID=mRNA_L-elsbetiae_contig1949.5792.1|Name=mRNA_L-elsbetiae_contig1949.5792.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1350bp|location=Sequence derived from alignment at L-elsbetiae_contig1949:21010..22646+ (Laminarionema elsbetiae ELsaHSoW15)back to top |