prot_L-elsbetiae_contig1948.5788.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1948.5788.1
Unique Nameprot_L-elsbetiae_contig1948.5788.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length302
Homology
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BLAST of mRNA_L-elsbetiae_contig1948.5788.1 vs. uniprot
Match: D7FW96_ECTSI (Ankyrin, TRAF-type zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW96_ECTSI)

HSP 1 Score: 276 bits (706), Expect = 1.060e-80
Identity = 191/350 (54.57%), Postives = 225/350 (64.29%), Query Frame = 0 
Query:    1 MDGVRALLNIGVDIDDYAEDEGDT--------------DTHAYP--GRIATPGAEAPRGQDYAGHD-------------GEGTVGSVDDTVDGNRTTHDDGNPVPTHNRSRDNGNDGSNNDYSGVRSTNGMILGGSTKTQSHASTTD-------------EDDTDQEDG---DDPWGDGRGESRWGQRI--GVTTGRSGTGDG-GAGLALAQALGSWCASVSAYDRLAYLAPGSAAQRAAEAETEWDELERRIARSSLDLQLEEFSIQVLSKEVTSATASTEYLSQKRAWGEDRLGVARLLSLFSPAGHSLVSWAAACGQTEVVEVLMSHGATAELGDETRAVSASIIQV 302
            ++GVRALLNIG+D       EG++              D H+ P   R  T  A++   Q   G+              GE T      TVDGNR  H+    +  ++   DN N  +  D +  R+T  + L  +T TQ ++ TTD             EDD D +     +DPWGDG GESRWGQ    G   G S TG G GA LAL +ALGSWCASVSAYDRLA+L PGSAA+RAAEAETEWDELERRIARS LD+QLEEFS+QVL++E+  AT S EYL+QKRAW EDRLGVARLLSLFSPAGHSLVSWAAACGQTE+VE+LMSHGATAELGDETRAVSASIIQ+
Sbjct:  816 LNGVRALLNIGIDGSSEGNAEGNSERRGSGCRLPGPLDDAHSPPHSDRTVTLSADSTCEQSGGGNXXXXXXXIEXNHSGGEETA----TTVDGNRAAHELSAQLSIYHGGTDNSNGRA--DANHRRNTKSVTLCDTTNTQIYSPTTDDGGGRXXXXXXXGEDDGDSDYSGADEDPWGDGCGESRWGQLTVRGTDIGTSHTGGGAGAELALVRALGSWCASVSAYDRLAHLPPGSAARRAAEAETEWDELERRIARSRLDVQLEEFSLQVLTEEIAGATTSAEYLTQKRAWVEDRLGVARLLSLFSPAGHSLVSWAAACGQTEIVEILMSHGATAELGDETRAVSASIIQL 1159
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BLAST of mRNA_L-elsbetiae_contig1948.5788.1 vs. uniprot
Match: A0A6H5L2H6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2H6_9PHAE)

HSP 1 Score: 256 bits (654), Expect = 9.540e-74
Identity = 176/338 (52.07%), Postives = 205/338 (60.65%), Query Frame = 0 
Query:    1 MDGVRALLNIGVDIDDYAEDEGDTDTHAYPGRIATP----------------GAEAPRGQDYAGHDGEGTVGSVDD---------TVDGNRTTHDDGNPVPTHNRSRDNGNDGSNNDYS-------GVRSTNGMILGGSTKTQSHASTTDEDDTDQEDGD-DPWGDGRGESRWGQRI--GVTTGRSGTG-DGGAGLALAQALGSWCASVSAYDRLAYLAPGSAAQRAAEAETEWDELERRIARSSLDLQLEEFSIQVLSKEVTSATASTEYLSQKRAWGEDRLGVARLLSLFSPAGHSLVSWAAACGQTEVVEVLMSHGATAELGDETRAVSASIIQV 302
            +DGVRALLNIG D       +GD++     GR+  P                 A++   Q   G+  E      ++         TVDGNR  H+    +  ++   DN N  ++ ++                               D DD+D    D DPWGDG GESRWGQ    G   G S TG D GA L L +ALGSWCASVSAYDRLA+L PGSAA+RAAE ETEWDELERRIAR  LD+QLEEFS QVL++E+ SAT S  YL+QK AW EDRLGVARLLSLFSPAGHSLVSWAAACGQTE+VE+LMSHGATAELGDETRAVSASIIQV
Sbjct: 1281 LDGVRALLNIGTDGSAEGNTQGDSERRGSGGRLPGPLDDARSSPHSDRTVTLSADSTCEQSGGGNTTESASAIEENHSGDEETTPTVDGNRAAHELSTQLSIYHGGTDNSNGRADANHRRNXXXXXXXXXXXXXXXXXXXXXXXXXXXEDGDDSDYSGADEDPWGDGYGESRWGQLTVRGTDIGTSHTGGDAGAELTLIRALGSWCASVSAYDRLAHLPPGSAARRAAETETEWDELERRIARLKLDVQLEEFSFQVLTEEIASATTSAAYLTQKLAWVEDRLGVARLLSLFSPAGHSLVSWAAACGQTEIVEILMSHGATAELGDETRAVSASIIQV 1618
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BLAST of mRNA_L-elsbetiae_contig1948.5788.1 vs. uniprot
Match: A0A7S1TZF4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZF4_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 7.820e-6
Identity = 28/84 (33.33%), Postives = 52/84 (61.90%), Query Frame = 0 
Query:  219 IQVLSKEVTSATASTEYLSQKRAWGEDRLGVARLLSLFSPAGHSLVSWAAACGQTEVVEVLMSHGATAELGDETRAVSASIIQV 302
            +++ +KE+       E   ++    E+ L VA+LL + +P GH++++WAAA G  ++V++L+ HGA    GD+ R ++A  IQ+
Sbjct: 1128 VKMTAKEIAKLQVELEKAEERYKIAENCLKVAQLLQITTPCGHTMLTWAAAQGNVDIVDLLLDHGADPGQGDQYRHLAAGCIQM 1211
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1948.5788.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FW96_ECTSI1.060e-8054.57Ankyrin, TRAF-type zinc finger protein n=1 Tax=Ect... [more]
A0A6H5L2H6_9PHAE9.540e-7452.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S1TZF4_9STRA7.820e-633.33Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 191..211
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 259..291
score: 9.304
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 259..291
score: 9.324

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1948contigL-elsbetiae_contig1948:21023..22165 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1948.5788.1mRNA_L-elsbetiae_contig1948.5788.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1948 21007..22165 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1948.5788.1 ID=prot_L-elsbetiae_contig1948.5788.1|Name=mRNA_L-elsbetiae_contig1948.5788.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=302bp
MDGVRALLNIGVDIDDYAEDEGDTDTHAYPGRIATPGAEAPRGQDYAGHD
GEGTVGSVDDTVDGNRTTHDDGNPVPTHNRSRDNGNDGSNNDYSGVRSTN
GMILGGSTKTQSHASTTDEDDTDQEDGDDPWGDGRGESRWGQRIGVTTGR
SGTGDGGAGLALAQALGSWCASVSAYDRLAYLAPGSAAQRAAEAETEWDE
LERRIARSSLDLQLEEFSIQVLSKEVTSATASTEYLSQKRAWGEDRLGVA
RLLSLFSPAGHSLVSWAAACGQTEVVEVLMSHGATAELGDETRAVSASII
QV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020683Ankyrin_rpt-contain_dom
IPR002110Ankyrin_rpt