prot_L-elsbetiae_contig18996.5581.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig18996.5581.1
Unique Nameprot_L-elsbetiae_contig18996.5581.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length96
Homology
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BLAST of mRNA_L-elsbetiae_contig18996.5581.1 vs. uniprot
Match: D7G2N2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2N2_ECTSI)

HSP 1 Score: 63.9 bits (154), Expect = 8.520e-10
Identity = 33/47 (70.21%), Postives = 36/47 (76.60%), Query Frame = 0 
Query:   16 RGALPRVRVVRGRHRQVHPPPRPVRAALRPQGEEGLLRK-PPQCSDV 61
            RGALP+VRV  GR RQVHPPP  VRAALRPQG+ GLLRK  P C  +
Sbjct:  637 RGALPQVRVAGGRRRQVHPPPGAVRAALRPQGQAGLLRKGAPMCGCI 683
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig18996.5581.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G2N2_ECTSI8.520e-1070.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig18996contigL-elsbetiae_contig18996:2362..2901 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig18996.5581.1mRNA_L-elsbetiae_contig18996.5581.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig18996 2361..2901 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig18996.5581.1 ID=prot_L-elsbetiae_contig18996.5581.1|Name=mRNA_L-elsbetiae_contig18996.5581.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=96bp
CLPRRQDGVPRGERGRGALPRVRVVRGRHRQVHPPPRPVRAALRPQGEEG
LLRKPPQCSDVRLHRGHARGLGGRLHRVRRRARARGQVLLVHRQRP
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