mRNA_L-elsbetiae_contig18996.5581.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig18996.5581.1 vs. uniprot
Match: D7G2N0_ECTSI (Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2879 RepID=D7G2N0_ECTSI) HSP 1 Score: 177 bits (448), Expect = 1.810e-51 Identity = 79/102 (77.45%), Postives = 89/102 (87.25%), Query Frame = 2 Query: 2 VCRV-------GKTEYPGESEGEVHCHGFVWSEDATDKYIHLLAQFVQHYDHKERRGYFGNLPNAPMCGCIEDMPEVSEADCTEYDDEPGREGKFSSCTDND 286 VCRV TEYPGESEGEVHCHGFVW EDATDKYIHLLAQFVQH+DH++RRGYFGN+ APMCGCIE+MP+VSEADCT YD+EPGREGKF++CT+ND Sbjct: 359 VCRVIDYPSMGETTEYPGESEGEVHCHGFVWPEDATDKYIHLLAQFVQHFDHRDRRGYFGNIEGAPMCGCIEEMPQVSEADCTTYDNEPGREGKFTACTNND 460
BLAST of mRNA_L-elsbetiae_contig18996.5581.1 vs. uniprot
Match: D7G2N2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2N2_ECTSI) HSP 1 Score: 176 bits (446), Expect = 1.170e-49 Identity = 79/102 (77.45%), Postives = 88/102 (86.27%), Query Frame = 2 Query: 2 VCRV-------GKTEYPGESEGEVHCHGFVWSEDATDKYIHLLAQFVQHYDHKERRGYFGNLPNAPMCGCIEDMPEVSEADCTEYDDEPGREGKFSSCTDND 286 VCRV TEYPGESEGEVHCHGFVW EDATDKYIHLLAQFVQH+DH++RRGYFGN+ APMCGCIE+MP+VSEADCT YD+EPGREGKF++CT ND Sbjct: 316 VCRVIDYPSMGETTEYPGESEGEVHCHGFVWPEDATDKYIHLLAQFVQHFDHRDRRGYFGNIEGAPMCGCIEEMPQVSEADCTTYDNEPGREGKFTACTKND 417
BLAST of mRNA_L-elsbetiae_contig18996.5581.1 vs. uniprot
Match: D7FT55_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT55_ECTSI) HSP 1 Score: 161 bits (408), Expect = 1.070e-45 Identity = 73/102 (71.57%), Postives = 87/102 (85.29%), Query Frame = 2 Query: 2 VCRV------GKT-EYPGESEGEVHCHGFVWSEDATDKYIHLLAQFVQHYDHKERRGYFGNLPNAPMCGCIEDMPEVSEADCTEYDDEPGREGKFSSCTDND 286 VCRV G+T E+PG+SEGEVHCHGFVW EDATDKYIHLL+QFVQ++DH++RRGY+GN+ APMCGCIE+MP VSEADCT YD +P REGKF++CT ND Sbjct: 345 VCRVVDYPSMGETLEFPGDSEGEVHCHGFVWPEDATDKYIHLLSQFVQNFDHRDRRGYYGNIEGAPMCGCIEEMPVVSEADCTTYDTDPEREGKFTACTKND 446
BLAST of mRNA_L-elsbetiae_contig18996.5581.1 vs. uniprot
Match: D7FT54_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT54_ECTSI) HSP 1 Score: 134 bits (336), Expect = 1.560e-35 Identity = 62/102 (60.78%), Postives = 73/102 (71.57%), Query Frame = 2 Query: 2 VCRV------GKT-EYPGESEGEVHCHGFVWSEDATDKYIHLLAQFVQHYDHKERRGYFGNLPNAPMCGCIEDMPEVSEADCTEYDDEPGREGKFSSCTDND 286 VCR+ G+T EYPG+SEG+VHCHG VW EDATDKYIHLLAQ+VQ +DH +GY+GN+ APMCGC EDMPEVS+ADCT Y E + C ND Sbjct: 293 VCRIHDYPSAGETLEYPGDSEGDVHCHGIVWPEDATDKYIHLLAQYVQTFDHIGNKGYYGNIEGAPMCGCAEDMPEVSKADCTNYSPTEEDEDRIRGCDPND 394
BLAST of mRNA_L-elsbetiae_contig18996.5581.1 vs. uniprot
Match: D8LHS4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHS4_ECTSI) HSP 1 Score: 110 bits (276), Expect = 1.980e-29 Identity = 49/95 (51.58%), Postives = 65/95 (68.42%), Query Frame = 2 Query: 2 VCRVGKTEYPGESEGEVHCHGFVWSEDATDKYIHLLAQFVQHYDHKERRGYFGNLPNAPMCGCIEDMPEVSEADCTEYDDEPGREGKFSSCTDND 286 V R G TE+PGESEG+VHCHG VW E ++D+YI LA V + H E +GYFG++P AP+C C+E MPEVS +DC++Y + F +C ND Sbjct: 19 VYRYGSTEFPGESEGDVHCHGLVWPEGSSDEYIIYLALDVAYNHHVEEKGYFGHIPGAPVCDCLERMPEVSRSDCSQYRPAHLKGSDFMACPKND 113
BLAST of mRNA_L-elsbetiae_contig18996.5581.1 vs. uniprot
Match: A0A6H5L319_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L319_9PHAE) HSP 1 Score: 117 bits (294), Expect = 2.650e-29 Identity = 64/147 (43.54%), Postives = 79/147 (53.74%), Query Frame = 2 Query: 2 VCRV-------GKTEYPGESEGEVHCHGFVWSEDATDKYIHLLAQFVQHYDHKERRGYFG---------------------------------------------NLPNAPMCGCIEDMPEVSEADCTEYDDEPGREGKFSSCTDND 286 VCRV G E+ G+SE E H HGFVW+EDATDKYIHLL+QFVQ +DH++RRGY+G ++ APM GC+E+MP VSEAD T YD +P REGKF++CT ND Sbjct: 272 VCRVLDYPSVGGALEFAGDSEREAHRHGFVWTEDATDKYIHLLSQFVQKFDHRDRRGYYGKYITVGKAAHNVIMVNGRTTGPGEDNTNNPLSPPPNVSHVILVVTSIEGAPMYGCVEEMPVVSEADGTTYDTDPEREGKFTACTTND 418
BLAST of mRNA_L-elsbetiae_contig18996.5581.1 vs. uniprot
Match: D7G8D2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8D2_ECTSI) HSP 1 Score: 105 bits (263), Expect = 1.450e-26 Identity = 47/95 (49.47%), Postives = 62/95 (65.26%), Query Frame = 2 Query: 2 VCRVGKTEYPGESEGEVHCHGFVWSEDATDKYIHLLAQFVQHYDHKERRGYFGNLPNAPMCGCIEDMPEVSEADCTEYDDEPGREGKFSSCTDND 286 VC E+PG+SEG VHCHGFVW E+A+D +I LA V +H + + Y GN+P AP+C C+E+MPEVS ADCT+Y F +C+ ND Sbjct: 82 VCSYRGEEFPGDSEGPVHCHGFVWPENASDDFIKYLALDVAFINHVDEKAYTGNIPGAPVCHCLEEMPEVSRADCTQYRKANLAGSDFMACSKND 176
BLAST of mRNA_L-elsbetiae_contig18996.5581.1 vs. uniprot
Match: D7G8C5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8C5_ECTSI) HSP 1 Score: 105 bits (263), Expect = 6.060e-26 Identity = 47/95 (49.47%), Postives = 62/95 (65.26%), Query Frame = 2 Query: 2 VCRVGKTEYPGESEGEVHCHGFVWSEDATDKYIHLLAQFVQHYDHKERRGYFGNLPNAPMCGCIEDMPEVSEADCTEYDDEPGREGKFSSCTDND 286 VC E+PG+SEG VHCHGFVW E+A+D +I LA V +H + + Y GN+P AP+C C+E+MPEVS ADCT+Y F +C+ ND Sbjct: 146 VCSYRGEEFPGDSEGPVHCHGFVWPENASDDFIKYLALDVAFINHVDEKAYTGNIPGAPVCHCLEEMPEVSRADCTQYRKANLAGSDFMACSKND 240
BLAST of mRNA_L-elsbetiae_contig18996.5581.1 vs. uniprot
Match: A0A7S3VDC8_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VDC8_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 4.480e-18 Identity = 36/74 (48.65%), Postives = 47/74 (63.51%), Query Frame = 2 Query: 26 YPGESEGEVHCHGFVWSEDATDKYIHLLAQ---FVQHYDHKERRGYFGNLPNAPMCGCIEDMPEVSEADCTEYD 238 + GE E + HCHGF W+ED+TD ++ YDH +RGY N+P APMCGC+E MP V+ ADCT+ D Sbjct: 216 FEGEEEDDSHCHGFAWAEDSTDTSARFKGNNLFYISMYDHLTQRGYARNVPGAPMCGCVEKMPVVTRADCTQID 289
BLAST of mRNA_L-elsbetiae_contig18996.5581.1 vs. uniprot
Match: A0A7S2P7R1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P7R1_9STRA) HSP 1 Score: 84.3 bits (207), Expect = 6.000e-18 Identity = 38/77 (49.35%), Postives = 46/77 (59.74%), Query Frame = 2 Query: 14 GKTEYPGESEGEVHCHGFVWSEDA--TDKYIHLLAQFVQHYDHKERRGYFGNLPNAPMCGCIEDMPEVSEADCTEYD 238 G +P ++EG++HCHG W D D Y +V YDH +RGY N+P APMCGC E MP VS ADCTE D Sbjct: 97 GYAIFPDDTEGDIHCHGLAWGNDVGLDDVYKGNNLFYVAMYDHLYQRGYVRNVPGAPMCGCAEQMPIVSRADCTEMD 173 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig18996.5581.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig18996.5581.1 >prot_L-elsbetiae_contig18996.5581.1 ID=prot_L-elsbetiae_contig18996.5581.1|Name=mRNA_L-elsbetiae_contig18996.5581.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=96bp CLPRRQDGVPRGERGRGALPRVRVVRGRHRQVHPPPRPVRAALRPQGEEGback to top mRNA from alignment at L-elsbetiae_contig18996:2361..2901- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig18996.5581.1 ID=mRNA_L-elsbetiae_contig18996.5581.1|Name=mRNA_L-elsbetiae_contig18996.5581.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=541bp|location=Sequence derived from alignment at L-elsbetiae_contig18996:2361..2901- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig18996:2361..2901- >mRNA_L-elsbetiae_contig18996.5581.1 ID=mRNA_L-elsbetiae_contig18996.5581.1|Name=mRNA_L-elsbetiae_contig18996.5581.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=576bp|location=Sequence derived from alignment at L-elsbetiae_contig18996:2361..2901- (Laminarionema elsbetiae ELsaHSoW15)back to top |