Homology
BLAST of mRNA_L-elsbetiae_contig1897.5573.1 vs. uniprot
Match:
D7G069_ECTSI (Non-structural maintenance of chromosomes element 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G069_ECTSI)
HSP 1 Score: 94.0 bits (232), Expect = 8.140e-21
Identity = 51/69 (73.91%), Postives = 57/69 (82.61%), Query Frame = 0
Query: 9 KGKKVKQNKDQTQTRIANMKEAEKHSDSFNSNQDMFETFINPKSFTQTVENIFDFSFFVKSGEGHISID 77
KGKK KQNKDQTQ RIA M+E EK + S +DMFET +NPKSFTQTVEN+FDFSFFVK GEGHI+ID
Sbjct: 301 KGKKAKQNKDQTQMRIAKMREHEK--EDAGSKKDMFETLVNPKSFTQTVENLFDFSFFVKRGEGHITID 367
BLAST of mRNA_L-elsbetiae_contig1897.5573.1 vs. uniprot
Match:
A0A6H5JPS6_9PHAE (Non-structural maintenance of chromosomes element 4 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPS6_9PHAE)
HSP 1 Score: 68.2 bits (165), Expect = 4.750e-13
Identity = 32/35 (91.43%), Postives = 34/35 (97.14%), Query Frame = 0
Query: 43 MFETFINPKSFTQTVENIFDFSFFVKSGEGHISID 77
MFET INPKSFTQTVEN+FDFSFFVKSGEGHI+ID
Sbjct: 1 MFETLINPKSFTQTVENLFDFSFFVKSGEGHITID 35
BLAST of mRNA_L-elsbetiae_contig1897.5573.1 vs. uniprot
Match:
G5ADR1_PHYSP (Non-structural maintenance of chromosomes element 4 n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5ADR1_PHYSP)
HSP 1 Score: 48.1 bits (113), Expect = 5.920e-5
Identity = 22/38 (57.89%), Postives = 28/38 (73.68%), Query Frame = 0
Query: 41 QDMFETFINPKSFTQTVENIFDFSFFVKSGEGHISIDE 78
Q +F+ INPKSFTQTVEN+FD SF V++ + IDE
Sbjct: 63 QPLFDVVINPKSFTQTVENLFDTSFLVRNSAAEVGIDE 100
BLAST of mRNA_L-elsbetiae_contig1897.5573.1 vs. uniprot
Match:
A0A225VE20_9STRA (Non-structural maintenance of chromosomes element 4 (Fragment) n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VE20_9STRA)
HSP 1 Score: 47.8 bits (112), Expect = 7.060e-5
Identity = 22/41 (53.66%), Postives = 28/41 (68.29%), Query Frame = 0
Query: 38 NSNQDMFETFINPKSFTQTVENIFDFSFFVKSGEGHISIDE 78
N +F+ INPKSFTQTVEN+FD SF V++ + IDE
Sbjct: 49 NDRHSLFDMVINPKSFTQTVENLFDTSFLVRNSSAEVGIDE 89
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1897.5573.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 4
V R P D V D G G K G K K V K Q N K D Q T Q T R I A N M K E A E K H S D S F N S N Q D M F E T F I N P K S F T Q T V E N I F D F S F F V K S G E G H I S I D E 10 20 30 40 50 60 70 Expect = 8.14e-21 / Id = 73.91 Expect = 4.75e-13 / Id = 91.43 Expect = 5.92e-5 / Id = 57.89 Expect = 7.06e-5 / Id = 53.66 Sequence D7G069_ECTSI A0A6H5JPS6_9PHAE G5ADR1_PHYSP A0A225VE20_9STRA
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InterPro
Analysis Name:
InterProScan on OGS1.0
Date Performed: 2022-09-29
V R P D V D G G K G K K V K Q N K D Q T Q T R I A N M K E A E K H S D S F N S N Q D M F E T F I N P K S F T Q T V E N I F D F S F F V K S G E G H I S I D E 10 20 30 40 50 60 70 Expect = 1.4E-12 / Score = 47.7 Score = Score = Sequence PF08743 PTHR16140 PTHR16140:SF0
IPR Term IPR Description Source Source Term Source Description Alignment
IPR014854 Non-structural maintenance of chromosome element 4, C-terminal PFAM PF08743 Nse4_C coord: 42..78 e-value: 1.4E-12 score: 47.7
IPR027786 Nse4/EID family PANTHER PTHR16140 UNCHARACTERIZED coord: 9..78
None No IPR available PANTHER PTHR16140:SF0 NSE4 HOMOLOG A, SMC5-SMC6 COMPLEX COMPONENT coord: 9..78
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_L-elsbetiae_contig1897.5573.1 ID=prot_L-elsbetiae_contig1897.5573.1|Name=mRNA_L-elsbetiae_contig1897.5573.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=78bp VRPDVDGGKGKKVKQNKDQTQTRIANMKEAEKHSDSFNSNQDMFETFINP KSFTQTVENIFDFSFFVKSGEGHISIDE back to top
Annotated Terms
The following terms have been associated with this polypeptide: