prot_L-elsbetiae_contig1822.5264.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1822.5264.1
Unique Nameprot_L-elsbetiae_contig1822.5264.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length107
Homology
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BLAST of mRNA_L-elsbetiae_contig1822.5264.1 vs. uniprot
Match: A0A6H5KKN4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKN4_9PHAE)

HSP 1 Score: 62.8 bits (151), Expect = 3.420e-9
Identity = 66/101 (65.35%), Postives = 72/101 (71.29%), Query Frame = 0 
Query:    1 WSRLCLHAASLSAAEGASXXXXXXXXXXXXXXXXXXXXXXXHKDEAPEGSAPADAEAACAREKAQRDIDEVSMLAAELKGKEKITEEMARDHQLRWIKGLV 101
            WSRLCLHAASLSAAEGA+   XXXXXXXXXXXXXXXXXXXX K EA   +A A  E A  REKAQR+    SM A+EL+ K K TEE  R HQL  +K L 
Sbjct: 1713 WSRLCLHAASLSAAEGAAAAAXXXXXXXXXXXXXXXXXXXXXKAEAWRRAAAASVEVAEIREKAQREAARGSMSASELQLKVKDTEEALRKHQLHRLKMLA 1813
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BLAST of mRNA_L-elsbetiae_contig1822.5264.1 vs. uniprot
Match: D8LQ96_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ96_ECTSI)

HSP 1 Score: 51.6 bits (122), Expect = 2.850e-5
Identity = 50/100 (50.00%), Postives = 55/100 (55.00%), Query Frame = 0 
Query:    1 WSRLCLHAASLSAAEGASXXXXXXXXXXXXXXXXXXXXXXXHKDEAPEGSAPADAEAACAREKAQRDIDEVSMLAAELKGKEKITEEMARDHQLRWIKGL 100
            WSRLCLHAASLSAAEGAS  XXXXXXXXX                    +          RE+AQR+    S+LAAELK K K TEE  RD QL  +K L
Sbjct: 2664 WSRLCLHAASLSAAEGASAAXXXXXXXXXAEAMEKEAEAAADXXXXWRRAXXXXXXXXXXRERAQREAARGSVLAAELKLKVKDTEEAVRDRQLHRLKML 2763
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1822.5264.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KKN4_9PHAE3.420e-965.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQ96_ECTSI2.850e-550.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 61..81
NoneNo IPR availableCOILSCoilCoilcoord: 25..45
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..14
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..106
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1822contigL-elsbetiae_contig1822:14265..14585 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1822.5264.1mRNA_L-elsbetiae_contig1822.5264.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1822 14265..14585 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1822.5264.1 ID=prot_L-elsbetiae_contig1822.5264.1|Name=mRNA_L-elsbetiae_contig1822.5264.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=107bp
WSRLCLHAASLSAAEGASAAATALARAARAKAMEKEAEAAAHKDEAPEGS
APADAEAACAREKAQRDIDEVSMLAAELKGKEKITEEMARDHQLRWIKGL
VRPSGG*
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