prot_L-elsbetiae_contig17795.5062.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig17795.5062.1
Unique Nameprot_L-elsbetiae_contig17795.5062.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length183
Homology
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BLAST of mRNA_L-elsbetiae_contig17795.5062.1 vs. uniprot
Match: D7G1Z5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1Z5_ECTSI)

HSP 1 Score: 65.1 bits (157), Expect = 4.940e-9
Identity = 34/45 (75.56%), Postives = 39/45 (86.67%), Query Frame = 0 
Query:   75 LRSPLARYLLLSAILVSLGLSLRYLWRQLAGLVGAALILSTARLW 119
            LR+PL RYLLLS +LV+ GL +R+LWRQLAGLVGAALILS AR W
Sbjct:  106 LRTPLERYLLLSVMLVAAGLGVRFLWRQLAGLVGAALILSAARRW 150
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig17795.5062.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G1Z5_ECTSI4.940e-975.56Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 79..100
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..78
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 101..183

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig17795contigL-elsbetiae_contig17795:1560..2108 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig17795.5062.1mRNA_L-elsbetiae_contig17795.5062.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig17795 1286..2108 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig17795.5062.1 ID=prot_L-elsbetiae_contig17795.5062.1|Name=mRNA_L-elsbetiae_contig17795.5062.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=183bp
MVVVEPSSAPRPFVASTAPLSRSHVGRTRKGTGTRGQSRVPESSVEPPPA
RAIGAEEATTLQPPRARPDPSSSGLRSPLARYLLLSAILVSLGLSLRYLW
RQLAGLVGAALILSTARLWQSSAGGAATARGKSSGAATAAPSGSGRGAPR
KDASCGADGSEPAAEATGPRDGLGGSSSRREGG
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