prot_L-elsbetiae_contig1778.5053.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1778.5053.1
Unique Nameprot_L-elsbetiae_contig1778.5053.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length172
Homology
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BLAST of mRNA_L-elsbetiae_contig1778.5053.1 vs. uniprot
Match: D7FIK4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIK4_ECTSI)

HSP 1 Score: 169 bits (427), Expect = 4.420e-47
Identity = 106/155 (68.39%), Postives = 123/155 (79.35%), Query Frame = 0 
Query:   18 GKIKASWYRRLLGEALLAAEIDRVEATQGVGVSDGLTAPWRKEFAKNAASVYALTINGQYVAEKLEMALASXXXXXXXXXXXXXXXXXXXXSPILNRTSYASCSLRDGGXXXXTAASRHTGNSPLAPARAHGAAKPGVRLLVDNREKRGATGNSQ 172
            GKIKA WYRRLLGEALL  E+ RVE  +G   ++GLTA WRKEFAKNA ++Y+LT NG+++A +LE A+      XXXXXXXXXXX     SPILNR+SYASCS RDG XXXXTAAS H G+SPLAP RA+GAAKPGVRLL+DNRE+RG T NSQ
Sbjct:  333 GKIKAGWYRRLLGEALLKVELHRVEKWKGPDAANGLTALWRKEFAKNAKTIYSLTPNGEWMATRLERAIGEGPGSXXXXXXXXXXXTA---SPILNRSSYASCSERDGXXXXXTAASTHNGHSPLAPTRANGAAKPGVRLLIDNRERRGVTSNSQ 484
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BLAST of mRNA_L-elsbetiae_contig1778.5053.1 vs. uniprot
Match: A0A6H5KF35_9PHAE (ERCC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF35_9PHAE)

HSP 1 Score: 97.4 bits (241), Expect = 2.370e-20
Identity = 92/304 (30.26%), Postives = 108/304 (35.53%), Query Frame = 0 
Query:   18 GKIKASWYRRLLGEALLAAEIDRVEATQGVGVSDGLTAPWRKEFAKNAASVYALTINGQYVAEKLEMALA---------------------------------------------------SXXXXXXXXXXXXXXXXXXXXSPILNR--------------------------------------------------------------------------------------------------TSYASCSLRDGGXXXXTAASRHTGNSPLAPARAHGAAKPGVRLLVDNREKRGATGNSQ 172
            GKIKA WYRRLLGEALL  E+ RVE  +G  V++GLTA WRKEF KNA ++Y+LT NG+++A +LE A+                                                    S                    S +L R                                                                                                    YASCS RDG XXXXTAAS   G+SPLAP RA+GAAKPGVRLL+DNREKRG T NSQ
Sbjct:  273 GKIKAGWYRRLLGEALLKVELHRVEKWKGPDVANGLTALWRKEFVKNAKTIYSLTPNGEWMATRLERAIGEGPGSGASSGNVNATTFDLAPLQWWDGAVCRVFAGPGYVSEGMNQKLAIILSFAGEGGDRGVGAKCISLETWSLLLGRGPLSDWGMHIRSSDCPKTCSNCHAVVKSRAEAHQYQESYGNFVFCTWRGGGGGRPWSDRRKPVRPSDPKKTRSDCDRSLPPYSCHRPVNITDDKDNDNDRYASCSERDGXXXXXTAASTRNGHSPLAPTRANGAAKPGVRLLIDNREKRGVTSNSQ 576
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1778.5053.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FIK4_ECTSI4.420e-4768.39Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KF35_9PHAE2.370e-2030.26ERCC4 domain-containing protein n=1 Tax=Ectocarpus... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1778contigL-elsbetiae_contig1778:12082..13008 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1778.5053.1mRNA_L-elsbetiae_contig1778.5053.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1778 12082..13008 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1778.5053.1 ID=prot_L-elsbetiae_contig1778.5053.1|Name=mRNA_L-elsbetiae_contig1778.5053.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=172bp
PHSSSASPSKTGPTSGTGKIKASWYRRLLGEALLAAEIDRVEATQGVGVS
DGLTAPWRKEFAKNAASVYALTINGQYVAEKLEMALASAEGGGRGQGASA
AATATATASPILNRTSYASCSLRDGGGGGGTAASRHTGNSPLAPARAHGA
AKPGVRLLVDNREKRGATGNSQ
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