prot_L-elsbetiae_contig17734.5041.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig17734.5041.1
Unique Nameprot_L-elsbetiae_contig17734.5041.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length52
Homology
BLAST of mRNA_L-elsbetiae_contig17734.5041.1 vs. uniprot
Match: A0A6H5KWQ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ4_9PHAE)

HSP 1 Score: 98.6 bits (244), Expect = 9.220e-23
Identity = 47/49 (95.92%), Postives = 48/49 (97.96%), Query Frame = 0
Query:    4 VRRLSSSGDFGLVLVHAAAHIQVDPSDVSNDLDPRFTQHFHRSLKVLTQ 52
            VRRLSSSGDFGLVLVHAAAHI VDPSD+SNDLDPRFTQHFHRSLKVLTQ
Sbjct: 2894 VRRLSSSGDFGLVLVHAAAHIHVDPSDMSNDLDPRFTQHFHRSLKVLTQ 2942          
BLAST of mRNA_L-elsbetiae_contig17734.5041.1 vs. uniprot
Match: D8LR26_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR26_ECTSI)

HSP 1 Score: 97.4 bits (241), Expect = 2.350e-22
Identity = 46/49 (93.88%), Postives = 48/49 (97.96%), Query Frame = 0
Query:    4 VRRLSSSGDFGLVLVHAAAHIQVDPSDVSNDLDPRFTQHFHRSLKVLTQ 52
            VRRLSSSGDFGLVLVHAAAHI VDPSD++NDLDPRFTQHFHRSLKVLTQ
Sbjct: 6579 VRRLSSSGDFGLVLVHAAAHIHVDPSDMTNDLDPRFTQHFHRSLKVLTQ 6627          
BLAST of mRNA_L-elsbetiae_contig17734.5041.1 vs. uniprot
Match: A0A7S3GQ97_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GQ97_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 4.290e-13
Identity = 28/47 (59.57%), Postives = 42/47 (89.36%), Query Frame = 0
Query:    6 RLSSSGDFGLVLVHAAAHIQVDPSDVSNDLDPRFTQHFHRSLKVLTQ 52
            RLSSSGDFGL+++HA +HI+V+P+D+SND DP+F   F+++LK+L+Q
Sbjct:   97 RLSSSGDFGLIVIHALSHIKVNPADLSNDADPKFLAEFYKNLKILSQ 143          
BLAST of mRNA_L-elsbetiae_contig17734.5041.1 vs. uniprot
Match: A0A2E9D1H1_9GAMM (Uncharacterized protein n=1 Tax=Chromatiales bacterium TaxID=2026725 RepID=A0A2E9D1H1_9GAMM)

HSP 1 Score: 66.2 bits (160), Expect = 2.190e-11
Identity = 28/47 (59.57%), Postives = 41/47 (87.23%), Query Frame = 0
Query:    6 RLSSSGDFGLVLVHAAAHIQVDPSDVSNDLDPRFTQHFHRSLKVLTQ 52
            RLSSSGDFGLV +HA +HI+V+PSD+S+D +P+FT  F+ +L++L+Q
Sbjct:  516 RLSSSGDFGLVAIHALSHIKVNPSDMSDDSNPQFTAEFYTNLRILSQ 562          
BLAST of mRNA_L-elsbetiae_contig17734.5041.1 vs. uniprot
Match: A0A835YHE9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHE9_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 9.300e-8
Identity = 27/50 (54.00%), Postives = 34/50 (68.00%), Query Frame = 0
Query:    5 RRLSSSGDFGLVLVHAAAHIQVD--PSDVSNDLDPRFTQHFHRSLKVLTQ 52
            RRL  SGDFGLVLVHAAAH+  D  P+ + +D  P FT+ FH +L  L +
Sbjct:   77 RRLGGSGDFGLVLVHAAAHLLSDAAPAHLHDDARPEFTRAFHGALATLAR 126          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig17734.5041.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5KWQ4_9PHAE9.220e-2395.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LR26_ECTSI2.350e-2293.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3GQ97_9STRA4.290e-1359.57Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A2E9D1H1_9GAMM2.190e-1159.57Uncharacterized protein n=1 Tax=Chromatiales bacte... [more]
A0A835YHE9_9STRA9.300e-854.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig17734contigL-elsbetiae_contig17734:2683..2838 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig17734.5041.1mRNA_L-elsbetiae_contig17734.5041.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig17734 2683..2838 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig17734.5041.1 ID=prot_L-elsbetiae_contig17734.5041.1|Name=mRNA_L-elsbetiae_contig17734.5041.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=52bp
MATVRRLSSSGDFGLVLVHAAAHIQVDPSDVSNDLDPRFTQHFHRSLKVL
TQ
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