prot_L-elsbetiae_contig1772.5033.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1772.5033.1
Unique Nameprot_L-elsbetiae_contig1772.5033.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length166
Homology
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BLAST of mRNA_L-elsbetiae_contig1772.5033.1 vs. uniprot
Match: A0A6H5JND2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JND2_9PHAE)

HSP 1 Score: 89.7 bits (221), Expect = 1.120e-19
Identity = 99/161 (61.49%), Postives = 111/161 (68.94%), Query Frame = 0 
Query:    1 MGEPVIGSIVCGSVALVMVIWNWRIVEHQKWLLRKCGKEAATKARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA----------CPSSSRSFVVKLESLPEWNESSPD---------MFSKTRERFETAPMSPALSSTRSRSGTGCFFKD 142
            MGEP+I SI CGS+A+VM++WNWR+ E QK   + C         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX           CPS     V+KLESLPE NES+           + +K RER ETAP+SP LSSTRSRSGTGCFF D
Sbjct:    1 MGEPIIASITCGSIAVVMLLWNWRMYELQKTRGKACAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAICPSR----VIKLESLPECNESTSQSQDKQSPLLLVTKPRERLETAPLSPPLSSTRSRSGTGCFFTD 157
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1772.5033.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JND2_9PHAE1.120e-1961.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 26..165
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..25
NoneNo IPR availableTMHMMTMhelixcoord: 4..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1772contigL-elsbetiae_contig1772:6841..8126 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1772.5033.1mRNA_L-elsbetiae_contig1772.5033.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1772 6454..8171 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1772.5033.1 ID=prot_L-elsbetiae_contig1772.5033.1|Name=mRNA_L-elsbetiae_contig1772.5033.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=166bp
MGEPVIGSIVCGSVALVMVIWNWRIVEHQKWLLRKCGKEAATKARARAQL
RAEARAKVAVSVAALEEASEEATRVSTEASTKSSACPSSSRSFVVKLESL
PEWNESSPDMFSKTRERFETAPMSPALSSTRSRSGTGCFFKDGSDTKPAV
DYRMSTGGDIDMYLA*
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