prot_L-elsbetiae_contig17714.5029.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig17714.5029.1
Unique Name	prot_L-elsbetiae_contig17714.5029.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	130

Homology

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BLAST of mRNA_L-elsbetiae_contig17714.5029.1 vs. uniprot
Match: D7FNI3_ECTSI (Clathrin assembly complex, medium subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNI3_ECTSI)

HSP 1 Score: 233 bits (593), Expect = 5.170e-73
Identity = 115/120 (95.83%), Postives = 119/120 (99.17%), Query Frame = 0

Query:    1 VIEFLHRVLDIMGDYFGGNVDESAIKESFSLVYQLLEEMMDNGYPLTTEPNALKAMIRPPTTFVRMVTAATGKSNVSDVLPDGTVSAMPWRKAAVKYSQNEVYLDIVEELDAIVNVNGQV 120
            VIEFLHRVLDIMGDYFGGNVDESAIKESFSLVYQLLEEMMDNG+PLTTEPNALKAMIRPPTTFVRMVTAATGKSNVSDVLPDGTVSAMPWRKA VKYSQNEVYLDI+EELDAI+NVNGQ+
Sbjct:   79 VIEFLHRVLDIMGDYFGGNVDESAIKESFSLVYQLLEEMMDNGHPLTTEPNALKAMIRPPTTFVRMVTAATGKSNVSDVLPDGTVSAMPWRKAGVKYSQNEVYLDIIEELDAILNVNGQI 198

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BLAST of mRNA_L-elsbetiae_contig17714.5029.1 vs. uniprot
Match: A0A835YUG2_9STRA (Mu homology domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUG2_9STRA)

HSP 1 Score: 183 bits (464), Expect = 1.760e-53
Identity = 90/120 (75.00%), Postives = 107/120 (89.17%), Query Frame = 0

Query:    2 IEFLHRVLDIMGDYFGGNVDESAIKESFSLVYQLLEEMMDNGYPLTTEPNALKAMIRPPTTFVRMVTAATGKSN-VSDVLPDGTVSAMPWRKAAVKYSQNEVYLDIVEELDAIVNVNGQV 120
            IEFLHRVLDI+ DY G  VDE++IKESFSLVYQLLEEMMDNG+P+TTEPNALKAMI+PPT   R+V AATG+S+ +S+ LPDGT+SAMPWRKA V+Y+QNE+YLDI+EE+DAIV  NGQV
Sbjct:   80 IEFLHRVLDILADYLGA-VDETSIKESFSLVYQLLEEMMDNGHPMTTEPNALKAMIKPPTVMGRVVAAATGRSDAISEALPDGTISAMPWRKAGVRYAQNEIYLDIIEEVDAIVAANGQV 198

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BLAST of mRNA_L-elsbetiae_contig17714.5029.1 vs. uniprot
Match: I2CP32_NANGC (AP-3 complex subunit mu n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CP32_NANGC)

HSP 1 Score: 179 bits (454), Expect = 3.210e-52
Identity = 89/121 (73.55%), Postives = 107/121 (88.43%), Query Frame = 0

Query:    1 VIEFLHRVLDIMGDYFGGNVDESAIKESFSLVYQLLEEMMDNGYPLTTEPNALKAMIRPPTTFVRMVTAATGK-SNVSDVLPDGTVSAMPWRKAAVKYSQNEVYLDIVEELDAIVNVNGQV 120
            VIEFLHR+LDI  +YFGG +++S+IK++FS VYQLLEEMMD+GYPLTTEPNALKAMIRPPT   R+  AATGK S VS++LPDGTVS MPWRK+ VKY+QNE+YLDIVEE+DAIV+ +GQV
Sbjct:   79 VIEFLHRILDIFSEYFGG-LEDSSIKDNFSTVYQLLEEMMDHGYPLTTEPNALKAMIRPPTLLTRLEAAATGKASGVSNLLPDGTVSNMPWRKSGVKYNQNEIYLDIVEEMDAIVDCSGQV 198

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BLAST of mRNA_L-elsbetiae_contig17714.5029.1 vs. uniprot
Match: F0YKX1_AURAN (MHD domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YKX1_AURAN)

HSP 1 Score: 178 bits (452), Expect = 5.830e-52
Identity = 86/120 (71.67%), Postives = 105/120 (87.50%), Query Frame = 0

Query:    1 VIEFLHRVLDIMGDYFGGNVDESAIKESFSLVYQLLEEMMDNGYPLTTEPNALKAMIRPPTTFVRMVTAATGKSNVSDVLPDGTVSAMPWRKAAVKYSQNEVYLDIVEELDAIVNVNGQV 120
            VIEFLHRV+DI  +YFG   DE +IK++FS+VYQLLEEM+DNG PLTTEPNALKAMI+PP+   R+   ATG+SNVSDVLPDGT+S+MPWRK+ VKY+QN++YLDIVEE+DAIV+ NGQV
Sbjct:   79 VIEFLHRVVDIFVEYFGA-ADEGSIKDNFSMVYQLLEEMLDNGNPLTTEPNALKAMIKPPSVMGRLQAVATGRSNVSDVLPDGTISSMPWRKSGVKYAQNDIYLDIVEEVDAIVDRNGQV 197

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BLAST of mRNA_L-elsbetiae_contig17714.5029.1 vs. uniprot
Match: A0A7S2GKZ3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GKZ3_9STRA)

HSP 1 Score: 178 bits (451), Expect = 8.030e-52
Identity = 84/120 (70.00%), Postives = 104/120 (86.67%), Query Frame = 0

Query:    1 VIEFLHRVLDIMGDYFGGNVDESAIKESFSLVYQLLEEMMDNGYPLTTEPNALKAMIRPPTTFVRMVTAATGKSNVSDVLPDGTVSAMPWRKAAVKYSQNEVYLDIVEELDAIVNVNGQV 120
            VIEFLHR++ I  +YFG +V+E+AIKE+FS  YQLLEEMMDNGYPLTTEPNALKAMI+PP+   R+  AATGKS +S+ LPDGT+S MPWRKA VKY+QNE+Y+DI+EE+DAIV+ NGQ+
Sbjct:   79 VIEFLHRIITIFTEYFG-SVEETAIKENFSTCYQLLEEMMDNGYPLTTEPNALKAMIKPPSVMGRLTAAATGKSGISEELPDGTISMMPWRKAGVKYAQNEIYMDIIEEVDAIVDKNGQI 197

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BLAST of mRNA_L-elsbetiae_contig17714.5029.1 vs. uniprot
Match: F0YHF4_AURAN (MHD domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YHF4_AURAN)

HSP 1 Score: 172 bits (437), Expect = 1.110e-51
Identity = 83/120 (69.17%), Postives = 103/120 (85.83%), Query Frame = 0

Query:    1 VIEFLHRVLDIMGDYFGGNVDESAIKESFSLVYQLLEEMMDNGYPLTTEPNALKAMIRPPTTFVRMVTAATGKSNVSDVLPDGTVSAMPWRKAAVKYSQNEVYLDIVEELDAIVNVNGQV 120
            VIEFLHR++DI  +YFG   DE +IK++FS+VYQLLEEM+DNG PL TEPNALKAMI+P +   R+   ATG+SNVSDVLPDGT+S+MPWRK+ VKY+QN++YLDIVEE+DAIV+ NGQV
Sbjct:   79 VIEFLHRIIDIFVEYFGA-ADEGSIKDNFSVVYQLLEEMLDNGNPLMTEPNALKAMIKPQSVMGRLQAVATGRSNVSDVLPDGTISSMPWRKSGVKYAQNDIYLDIVEEVDAIVDRNGQV 197

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BLAST of mRNA_L-elsbetiae_contig17714.5029.1 vs. uniprot
Match: A0A662XRX9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XRX9_9STRA)

HSP 1 Score: 165 bits (418), Expect = 2.360e-49
Identity = 77/120 (64.17%), Postives = 101/120 (84.17%), Query Frame = 0

Query:    1 VIEFLHRVLDIMGDYFGGNVDESAIKESFSLVYQLLEEMMDNGYPLTTEPNALKAMIRPPTTFVRMVTAATGKSNVSDVLPDGTVSAMPWRKAAVKYSQNEVYLDIVEELDAIVNVNGQV 120
            VIEFLHRVL +  DYFG N DE+++K++FS VYQLLEEM+DNGYPLTTEPNALKAM+ PP+T  R+    +GKS VS+ LPDG +S +PWRK+ V+Y+QNE+Y DIVEE+DAI++V+G++
Sbjct:   86 VIEFLHRVLAVFRDYFG-NFDENSMKDNFSTVYQLLEEMLDNGYPLTTEPNALKAMVAPPSTANRIAAMVSGKSRVSNTLPDGAISNIPWRKSGVRYTQNEIYFDIVEEIDAIIDVSGRM 204

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BLAST of mRNA_L-elsbetiae_contig17714.5029.1 vs. uniprot
Match: W4FFE6_9STRA (MHD domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FFE6_9STRA)

HSP 1 Score: 167 bits (422), Expect = 2.440e-48
Identity = 79/120 (65.83%), Postives = 100/120 (83.33%), Query Frame = 0

Query:    1 VIEFLHRVLDIMGDYFGGNVDESAIKESFSLVYQLLEEMMDNGYPLTTEPNALKAMIRPPTTFVRMVTAATGKSNVSDVLPDGTVSAMPWRKAAVKYSQNEVYLDIVEELDAIVNVNGQV 120
            VIEFLHRV+ +  DYFG + +ESAIK++FS VYQLLEEM+DNGYPLTTEPNALKAM+ PP+T  R+    +GKS VSD LPDG +S +PWRKA VKY+QNE+Y D+VEE+DAI++ +GQ+
Sbjct:   79 VIEFLHRVVAVFRDYFG-SFEESAIKDNFSTVYQLLEEMLDNGYPLTTEPNALKAMVAPPSTVNRIAAIVSGKSRVSDQLPDGAISNIPWRKAGVKYTQNEIYFDVVEEIDAIIDSHGQM 197

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BLAST of mRNA_L-elsbetiae_contig17714.5029.1 vs. uniprot
Match: A0A067CA37_SAPPC (MHD domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CA37_SAPPC)

HSP 1 Score: 168 bits (426), Expect = 4.130e-48
Identity = 83/120 (69.17%), Postives = 98/120 (81.67%), Query Frame = 0

Query:    1 VIEFLHRVLDIMGDYFGGNVDESAIKESFSLVYQLLEEMMDNGYPLTTEPNALKAMIRPPTTFVRMVTAATGKSNVSDVLPDGTVSAMPWRKAAVKYSQNEVYLDIVEELDAIVNVNGQV 120
            VIE LHRV+ +  DYFG   DESAIK++FS VYQLLEEM+DNGYPLT EPNALKAM+ PP+T  R+    +GKS VSDVLPDG VS MPWRKA VKY+QNE+Y DIVEE+DAIV+ +GQ+
Sbjct:   79 VIEVLHRVVAVFLDYFG-KFDESAIKDNFSTVYQLLEEMLDNGYPLTMEPNALKAMVAPPSTVNRLTAMVSGKSRVSDVLPDGAVSDMPWRKAGVKYTQNEIYFDIVEEIDAIVDTHGQM 197

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BLAST of mRNA_L-elsbetiae_contig17714.5029.1 vs. uniprot
Match: A0A7S2G8T1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G8T1_9STRA)

HSP 1 Score: 161 bits (408), Expect = 7.510e-48
Identity = 78/115 (67.83%), Postives = 98/115 (85.22%), Query Frame = 0

Query:    1 VIEFLHRVLDIMGDYFGGNVDESAIKESFSLVYQLLEEMMDNGYPLTTEPNALKAMIRPPTTFVRMVTAATGKSNVSDVLPDGTVSAMPWRKAAVKYSQNEVYLDIVEELDAIVN 115
            VIEFLHR++DI  +YFG +V+E  IK++FS  YQLLEEMMDNGYPLTTEPNALKAMI+PP+   R+ + ATGKS +SD L +G VS+MPWRKA VKY+QNE+Y+DI+EE+DAIV+
Sbjct:   92 VIEFLHRIIDIYTEYFG-SVEEQNIKDNFSTCYQLLEEMMDNGYPLTTEPNALKAMIKPPSVMGRVHSYATGKSGISDDLAEGMVSSMPWRKAGVKYAQNEIYMDIIEEVDAIVD 205

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig17714.5029.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig17714.5029.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FNI3_ECTSI	5.170e-73	95.83	Clathrin assembly complex, medium subunit n=1 Tax=...	[more]
A0A835YUG2_9STRA	1.760e-53	75.00	Mu homology domain-containing protein n=1 Tax=Trib...	[more]
I2CP32_NANGC	3.210e-52	73.55	AP-3 complex subunit mu n=1 Tax=Nannochloropsis ga...	[more]
F0YKX1_AURAN	5.830e-52	71.67	MHD domain-containing protein n=1 Tax=Aureococcus ...	[more]
A0A7S2GKZ3_9STRA	8.030e-52	70.00	Hypothetical protein n=1 Tax=Dictyocha speculum Ta...	[more]
F0YHF4_AURAN	1.110e-51	69.17	MHD domain-containing protein n=1 Tax=Aureococcus ...	[more]
A0A662XRX9_9STRA	2.360e-49	64.17	Uncharacterized protein (Fragment) n=1 Tax=Nothoph...	[more]
W4FFE6_9STRA	2.440e-48	65.83	MHD domain-containing protein n=1 Tax=Aphanomyces ...	[more]
A0A067CA37_SAPPC	4.130e-48	69.17	MHD domain-containing protein n=2 Tax=Saprolegnia ...	[more]
A0A7S2G8T1_9STRA	7.510e-48	67.83	Hypothetical protein (Fragment) n=1 Tax=Florenciel...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001392	Clathrin adaptor, mu subunit	PRINTS	PR00314	CLATHRINADPT	coord: 90..118 score: 39.81 coord: 22..49 score: 49.03
None	No IPR available	GENE3D	3.30.450.60		coord: 1..62 e-value: 1.9E-20 score: 75.1
None	No IPR available	GENE3D	2.60.40.1170		coord: 84..123 e-value: 2.6E-8 score: 35.5
None	No IPR available	PANTHER	PTHR10529:SF340	CARMINE, ISOFORM A	coord: 1..120
None	No IPR available	PANTHER	PTHR10529	LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED	coord: 1..120
IPR036168	AP-2 complex subunit mu, C-terminal superfamily	SUPERFAMILY	49447	Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor	coord: 89..129
IPR011012	Longin-like domain superfamily	SUPERFAMILY	64356	SNARE-like	coord: 1..60

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig17714	contig	L-elsbetiae_contig17714:421..1470 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig17714.5029.1	mRNA_L-elsbetiae_contig17714.5029.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig17714 421..1470 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig17714.5029.1 ID=prot_L-elsbetiae_contig17714.5029.1|Name=mRNA_L-elsbetiae_contig17714.5029.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=130bp
VIEFLHRVLDIMGDYFGGNVDESAIKESFSLVYQLLEEMMDNGYPLTTEP
NALKAMIRPPTTFVRMVTAATGKSNVSDVLPDGTVSAMPWRKAAVKYSQN
EVYLDIVEELDAIVNVNGQVGVGGGCWCRC

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001392	Clathrin_mu
IPR036168	AP2_Mu_C_sf
IPR011012	Longin-like_dom_sf