mRNA_L-elsbetiae_contig17714.5029.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig17714.5029.1 vs. uniprot
Match: D7FNI3_ECTSI (Clathrin assembly complex, medium subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNI3_ECTSI) HSP 1 Score: 233 bits (593), Expect = 5.170e-73 Identity = 115/120 (95.83%), Postives = 119/120 (99.17%), Query Frame = 1 Query: 1 VIEFLHRVLDIMGDYFGGNVDESAIKESFSLVYQLLEEMMDNGYPLTTEPNALKAMIRPPTTFVRMVTAATGKSNVSDVLPDGTVSAMPWRKAAVKYSQNEVYLDIVEELDAIVNVNGQV 360 VIEFLHRVLDIMGDYFGGNVDESAIKESFSLVYQLLEEMMDNG+PLTTEPNALKAMIRPPTTFVRMVTAATGKSNVSDVLPDGTVSAMPWRKA VKYSQNEVYLDI+EELDAI+NVNGQ+ Sbjct: 79 VIEFLHRVLDIMGDYFGGNVDESAIKESFSLVYQLLEEMMDNGHPLTTEPNALKAMIRPPTTFVRMVTAATGKSNVSDVLPDGTVSAMPWRKAGVKYSQNEVYLDIIEELDAILNVNGQI 198
BLAST of mRNA_L-elsbetiae_contig17714.5029.1 vs. uniprot
Match: A0A835YUG2_9STRA (Mu homology domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUG2_9STRA) HSP 1 Score: 183 bits (464), Expect = 1.760e-53 Identity = 90/120 (75.00%), Postives = 107/120 (89.17%), Query Frame = 1 Query: 4 IEFLHRVLDIMGDYFGGNVDESAIKESFSLVYQLLEEMMDNGYPLTTEPNALKAMIRPPTTFVRMVTAATGKSN-VSDVLPDGTVSAMPWRKAAVKYSQNEVYLDIVEELDAIVNVNGQV 360 IEFLHRVLDI+ DY G VDE++IKESFSLVYQLLEEMMDNG+P+TTEPNALKAMI+PPT R+V AATG+S+ +S+ LPDGT+SAMPWRKA V+Y+QNE+YLDI+EE+DAIV NGQV Sbjct: 80 IEFLHRVLDILADYLGA-VDETSIKESFSLVYQLLEEMMDNGHPMTTEPNALKAMIKPPTVMGRVVAAATGRSDAISEALPDGTISAMPWRKAGVRYAQNEIYLDIIEEVDAIVAANGQV 198
BLAST of mRNA_L-elsbetiae_contig17714.5029.1 vs. uniprot
Match: I2CP32_NANGC (AP-3 complex subunit mu n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CP32_NANGC) HSP 1 Score: 179 bits (454), Expect = 3.210e-52 Identity = 89/121 (73.55%), Postives = 107/121 (88.43%), Query Frame = 1 Query: 1 VIEFLHRVLDIMGDYFGGNVDESAIKESFSLVYQLLEEMMDNGYPLTTEPNALKAMIRPPTTFVRMVTAATGK-SNVSDVLPDGTVSAMPWRKAAVKYSQNEVYLDIVEELDAIVNVNGQV 360 VIEFLHR+LDI +YFGG +++S+IK++FS VYQLLEEMMD+GYPLTTEPNALKAMIRPPT R+ AATGK S VS++LPDGTVS MPWRK+ VKY+QNE+YLDIVEE+DAIV+ +GQV Sbjct: 79 VIEFLHRILDIFSEYFGG-LEDSSIKDNFSTVYQLLEEMMDHGYPLTTEPNALKAMIRPPTLLTRLEAAATGKASGVSNLLPDGTVSNMPWRKSGVKYNQNEIYLDIVEEMDAIVDCSGQV 198
BLAST of mRNA_L-elsbetiae_contig17714.5029.1 vs. uniprot
Match: F0YKX1_AURAN (MHD domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YKX1_AURAN) HSP 1 Score: 178 bits (452), Expect = 5.830e-52 Identity = 86/120 (71.67%), Postives = 105/120 (87.50%), Query Frame = 1 Query: 1 VIEFLHRVLDIMGDYFGGNVDESAIKESFSLVYQLLEEMMDNGYPLTTEPNALKAMIRPPTTFVRMVTAATGKSNVSDVLPDGTVSAMPWRKAAVKYSQNEVYLDIVEELDAIVNVNGQV 360 VIEFLHRV+DI +YFG DE +IK++FS+VYQLLEEM+DNG PLTTEPNALKAMI+PP+ R+ ATG+SNVSDVLPDGT+S+MPWRK+ VKY+QN++YLDIVEE+DAIV+ NGQV Sbjct: 79 VIEFLHRVVDIFVEYFGA-ADEGSIKDNFSMVYQLLEEMLDNGNPLTTEPNALKAMIKPPSVMGRLQAVATGRSNVSDVLPDGTISSMPWRKSGVKYAQNDIYLDIVEEVDAIVDRNGQV 197
BLAST of mRNA_L-elsbetiae_contig17714.5029.1 vs. uniprot
Match: A0A7S2GKZ3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GKZ3_9STRA) HSP 1 Score: 178 bits (451), Expect = 8.030e-52 Identity = 84/120 (70.00%), Postives = 104/120 (86.67%), Query Frame = 1 Query: 1 VIEFLHRVLDIMGDYFGGNVDESAIKESFSLVYQLLEEMMDNGYPLTTEPNALKAMIRPPTTFVRMVTAATGKSNVSDVLPDGTVSAMPWRKAAVKYSQNEVYLDIVEELDAIVNVNGQV 360 VIEFLHR++ I +YFG +V+E+AIKE+FS YQLLEEMMDNGYPLTTEPNALKAMI+PP+ R+ AATGKS +S+ LPDGT+S MPWRKA VKY+QNE+Y+DI+EE+DAIV+ NGQ+ Sbjct: 79 VIEFLHRIITIFTEYFG-SVEETAIKENFSTCYQLLEEMMDNGYPLTTEPNALKAMIKPPSVMGRLTAAATGKSGISEELPDGTISMMPWRKAGVKYAQNEIYMDIIEEVDAIVDKNGQI 197
BLAST of mRNA_L-elsbetiae_contig17714.5029.1 vs. uniprot
Match: F0YHF4_AURAN (MHD domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YHF4_AURAN) HSP 1 Score: 172 bits (437), Expect = 1.110e-51 Identity = 83/120 (69.17%), Postives = 103/120 (85.83%), Query Frame = 1 Query: 1 VIEFLHRVLDIMGDYFGGNVDESAIKESFSLVYQLLEEMMDNGYPLTTEPNALKAMIRPPTTFVRMVTAATGKSNVSDVLPDGTVSAMPWRKAAVKYSQNEVYLDIVEELDAIVNVNGQV 360 VIEFLHR++DI +YFG DE +IK++FS+VYQLLEEM+DNG PL TEPNALKAMI+P + R+ ATG+SNVSDVLPDGT+S+MPWRK+ VKY+QN++YLDIVEE+DAIV+ NGQV Sbjct: 79 VIEFLHRIIDIFVEYFGA-ADEGSIKDNFSVVYQLLEEMLDNGNPLMTEPNALKAMIKPQSVMGRLQAVATGRSNVSDVLPDGTISSMPWRKSGVKYAQNDIYLDIVEEVDAIVDRNGQV 197
BLAST of mRNA_L-elsbetiae_contig17714.5029.1 vs. uniprot
Match: A0A662XRX9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XRX9_9STRA) HSP 1 Score: 165 bits (418), Expect = 2.360e-49 Identity = 77/120 (64.17%), Postives = 101/120 (84.17%), Query Frame = 1 Query: 1 VIEFLHRVLDIMGDYFGGNVDESAIKESFSLVYQLLEEMMDNGYPLTTEPNALKAMIRPPTTFVRMVTAATGKSNVSDVLPDGTVSAMPWRKAAVKYSQNEVYLDIVEELDAIVNVNGQV 360 VIEFLHRVL + DYFG N DE+++K++FS VYQLLEEM+DNGYPLTTEPNALKAM+ PP+T R+ +GKS VS+ LPDG +S +PWRK+ V+Y+QNE+Y DIVEE+DAI++V+G++ Sbjct: 86 VIEFLHRVLAVFRDYFG-NFDENSMKDNFSTVYQLLEEMLDNGYPLTTEPNALKAMVAPPSTANRIAAMVSGKSRVSNTLPDGAISNIPWRKSGVRYTQNEIYFDIVEEIDAIIDVSGRM 204
BLAST of mRNA_L-elsbetiae_contig17714.5029.1 vs. uniprot
Match: W4FFE6_9STRA (MHD domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FFE6_9STRA) HSP 1 Score: 167 bits (422), Expect = 2.440e-48 Identity = 79/120 (65.83%), Postives = 100/120 (83.33%), Query Frame = 1 Query: 1 VIEFLHRVLDIMGDYFGGNVDESAIKESFSLVYQLLEEMMDNGYPLTTEPNALKAMIRPPTTFVRMVTAATGKSNVSDVLPDGTVSAMPWRKAAVKYSQNEVYLDIVEELDAIVNVNGQV 360 VIEFLHRV+ + DYFG + +ESAIK++FS VYQLLEEM+DNGYPLTTEPNALKAM+ PP+T R+ +GKS VSD LPDG +S +PWRKA VKY+QNE+Y D+VEE+DAI++ +GQ+ Sbjct: 79 VIEFLHRVVAVFRDYFG-SFEESAIKDNFSTVYQLLEEMLDNGYPLTTEPNALKAMVAPPSTVNRIAAIVSGKSRVSDQLPDGAISNIPWRKAGVKYTQNEIYFDVVEEIDAIIDSHGQM 197
BLAST of mRNA_L-elsbetiae_contig17714.5029.1 vs. uniprot
Match: A0A067CA37_SAPPC (MHD domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CA37_SAPPC) HSP 1 Score: 168 bits (426), Expect = 4.130e-48 Identity = 83/120 (69.17%), Postives = 98/120 (81.67%), Query Frame = 1 Query: 1 VIEFLHRVLDIMGDYFGGNVDESAIKESFSLVYQLLEEMMDNGYPLTTEPNALKAMIRPPTTFVRMVTAATGKSNVSDVLPDGTVSAMPWRKAAVKYSQNEVYLDIVEELDAIVNVNGQV 360 VIE LHRV+ + DYFG DESAIK++FS VYQLLEEM+DNGYPLT EPNALKAM+ PP+T R+ +GKS VSDVLPDG VS MPWRKA VKY+QNE+Y DIVEE+DAIV+ +GQ+ Sbjct: 79 VIEVLHRVVAVFLDYFG-KFDESAIKDNFSTVYQLLEEMLDNGYPLTMEPNALKAMVAPPSTVNRLTAMVSGKSRVSDVLPDGAVSDMPWRKAGVKYTQNEIYFDIVEEIDAIVDTHGQM 197
BLAST of mRNA_L-elsbetiae_contig17714.5029.1 vs. uniprot
Match: A0A7S2G8T1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G8T1_9STRA) HSP 1 Score: 161 bits (408), Expect = 7.510e-48 Identity = 78/115 (67.83%), Postives = 98/115 (85.22%), Query Frame = 1 Query: 1 VIEFLHRVLDIMGDYFGGNVDESAIKESFSLVYQLLEEMMDNGYPLTTEPNALKAMIRPPTTFVRMVTAATGKSNVSDVLPDGTVSAMPWRKAAVKYSQNEVYLDIVEELDAIVN 345 VIEFLHR++DI +YFG +V+E IK++FS YQLLEEMMDNGYPLTTEPNALKAMI+PP+ R+ + ATGKS +SD L +G VS+MPWRKA VKY+QNE+Y+DI+EE+DAIV+ Sbjct: 92 VIEFLHRIIDIYTEYFG-SVEEQNIKDNFSTCYQLLEEMMDNGYPLTTEPNALKAMIKPPSVMGRVHSYATGKSGISDDLAEGMVSSMPWRKAGVKYAQNEIYMDIIEEVDAIVD 205 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig17714.5029.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig17714.5029.1 >prot_L-elsbetiae_contig17714.5029.1 ID=prot_L-elsbetiae_contig17714.5029.1|Name=mRNA_L-elsbetiae_contig17714.5029.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=130bp VIEFLHRVLDIMGDYFGGNVDESAIKESFSLVYQLLEEMMDNGYPLTTEPback to top mRNA from alignment at L-elsbetiae_contig17714:421..1470- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig17714.5029.1 ID=mRNA_L-elsbetiae_contig17714.5029.1|Name=mRNA_L-elsbetiae_contig17714.5029.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1050bp|location=Sequence derived from alignment at L-elsbetiae_contig17714:421..1470- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig17714:421..1470- >mRNA_L-elsbetiae_contig17714.5029.1 ID=mRNA_L-elsbetiae_contig17714.5029.1|Name=mRNA_L-elsbetiae_contig17714.5029.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=780bp|location=Sequence derived from alignment at L-elsbetiae_contig17714:421..1470- (Laminarionema elsbetiae ELsaHSoW15)back to top |