prot_L-elsbetiae_contig1770.5023.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1770.5023.1
Unique Nameprot_L-elsbetiae_contig1770.5023.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length879
Homology
BLAST of mRNA_L-elsbetiae_contig1770.5023.1 vs. uniprot
Match: D8LLI3_ECTSI (Presumed helicase required for RNA polymerase II transcription termination and processing of RNAs n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLI3_ECTSI)

HSP 1 Score: 546 bits (1407), Expect = 1.770e-174
Identity = 394/758 (51.98%), Postives = 440/758 (58.05%), Query Frame = 0
Query:    1 RRHQLNTQIRRLRGDVLVAKQRRRDALRGLEVERGRIRRSLVSNAQARRRFRQVVCSTLSGCGSGPLIEAVSVSRKGFDTVIVDEACQATEPSTLIPLSLGCKRLILVGDPRQLPATVISQRAARLNLEVSLFERLERAGFPVHMLTVQYRMHPEIRSFPSARFYGGRLTDAPCVRSSSSXXXXXXXXXXXXXXXXRGGRSLMLGPCFPPFLVVDVGCGLERRVGNSYQNPREASFVAAFVERLVAAXXXXXXXSGGFHRGRGAEXXXXXXXXXXXXXXXXXSVESVGGRVVRVGVITPYRGQVQCIRQELGSGSXXXXXXXXSRRIQGGADGGGVDVEVSTVDGFQGKEVDVVLFSCVRAPSSXXXXXXXXXXXXXXXXXXXXXXIGFLADRRRMNVAITRARLSLVVLGNARRLSSDADWRALVEHAASRGRLVEEGRAGDGGPEEVFARLEAGAAGXXXXXXXXXXXXXXXXXXXXXXRSPRRSYPDAXXXXXXXXXXXXXGMAARGGDARTTATSRK---------HAEAPGIQPGSTKP-------PGGQRSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLARRRG--STADGEPRPPPIRAGD----VAG-----RDHAPIQPVRAGAASAAAAKGSXXXXXXXXXXXXXXXXXXXXXXXXXP---KRPRSVNEGFLAGLLGSLTANAGGIASGKDHAFRQGLRGGEDDTRKRAAAAPRLGGARLTELSRPREPRQAPAA 728
            RRHQLNT IRRLRG++LVAKQRRRDALR LEVERG+IRRSLV            VC+TLSGCGSGP++EAVS+S KGFDTVIVDEACQATEPSTLIPLSLGCKRLILVGDPRQLPATVISQRAARLNLEVSLFERLERAG+PVHMLTVQYRMHPEIR+FPSARFY GRLTDAPCVR  ++                       LGPCFPPFL+VDV  G ERR G+SYQNPREASFV+AF+ RLVA+         G   GRG +   XXXXXXXXXX        V    VRVGVITPYRGQV CI+QEL      XXXXXX  R++GG + GGVD EVSTVDGFQGKEVDVVLFSCVRAPSS XXXXXX               IGFLAD+RRMNVA+TRAR SLVVLGN  RLSSD  W+ALV+H+ SR RL          PE V AR   G   XXX                           +A             G   R GD ++T  +R           A   G+  GS K        P G R+                                       +   R    S   G+ R P  R GD     AG     RD  P+   +     A  AK +                             KR  + + GFL GLL SL++NAGGIASGK+H FRQGLRGGED+ R+R AAAPRLGGAR+TELSRP EP+QAP A
Sbjct:  345 RRHQLNTHIRRLRGELLVAKQRRRDALRSLEVERGKIRRSLV------------VCATLSGCGSGPMVEAVSLSGKGFDTVIVDEACQATEPSTLIPLSLGCKRLILVGDPRQLPATVISQRAARLNLEVSLFERLERAGYPVHMLTVQYRMHPEIRAFPSARFYNGRLTDAPCVRDQAAIPAQSPSSETTALPP--------LGPCFPPFLLVDVSSGSERRAGSSYQNPREASFVSAFLARLVAS---------GLRSGRGVKAGGXXXXXXXXXXGQDREKSGV----VRVGVITPYRGQVHCIQQELSG----XXXXXXXXRLKGGVEDGGVDAEVSTVDGFQGKEVDVVLFSCVRAPSSGXXXXXX---------------IGFLADQRRMNVALTRARRSLVVLGNVGRLSSDGTWKALVDHSKSRDRLE---------PEAVKARTSGGXXXXXXDG-------------------------EALCARLEETAAGKKGGRDRSGDRQSTGRNRAGRGGRGEADDAVGSGVAGGSDKKEIQAPRRPAGSRTGGHGRGDGSGGINVPDDRAAAAVVVPPAVADIGEHCADRRANPRHEPESVGSGQRRKPSSRGGDGVRPSAGLEGSVRDRPPVDKRQQRHEEAGGAKPTPRGSACRRPDGGAANRPQKRARADGQGAAKRVSTPDGGFLGGLLSSLSSNAGGIASGKEHDFRQGLRGGEDEERRRVAAAPRLGGARVTELSRPVEPKQAPPA 1016          
BLAST of mRNA_L-elsbetiae_contig1770.5023.1 vs. uniprot
Match: A0A6H5J8A4_9PHAE (AAA_12 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8A4_9PHAE)

HSP 1 Score: 283 bits (724), Expect = 6.060e-80
Identity = 251/581 (43.20%), Postives = 292/581 (50.26%), Query Frame = 0
Query:  161 SARFYGGRLTDAPCVRSSSSXXXXXXXXXXXXXXXXRGGRSLM-LGPCFPPFLVVDVGCGLERRVGNSYQNPREASFVAAFVERLVAAXXXXXXXSGGFHRGRGAEXXXXXXXXXXXXXXXXXSVESVGGRVVRVGVITPYRGQVQCIRQELGSGSXXXXXXXXSRRIQGGADGGGVDVEVSTVDGFQGKEVDVVLFSCVRAPSSXXXXXXXXXXXXXXXXXXXXXXIGFLADRRRMNVAITRARLSLVVLGNARRLSSDADWRALVEHAASRGRL---VEEGRAGDGGP------EEVFARLEAGAAGXXXXXXXXXXXXXXXXXXXXXXRSPRRSYPDAXXXXXXXXXXXXXGMAARGGDARTTATSRKHAEAPGIQPGSTKPPGGQRSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLARRRGSTADGEPRPPPIRAGDVAGRDHAPIQPVRAGAASAAAAKGSXXXXXXXXXXXXXXXXXXXXXXXXXP---KRPRSVNEGFLAGLLGSLTANAGGIASGKDHAFRQGLRGGEDDTRKRAAAAPRLGGARLTELSRPREPRQAPAA 728
            SARFY GRLTDAPCVR  ++                 G  +L  LGPCFPPFL+VDV  G ERR G+SYQNPREASFV+AF+ RLVA+         G   GRG +   XXXXXXXXXXXX    +S    VVRVG+ITPYRGQV CI+QEL  G          RR++GG + GGVD EVSTVDGFQGKEVDVVLFSCVRAPSS XXXXXXXXX            IGFLAD+RRMNVA+TRAR SL++LGN  RLSSDA W ALV+H+ SR RL   V + R   G        E + ARLE  AAG                      R  R    DA                A G D +     R+ A   G + G      G                                             RR+ S   G+   P  R  + + RD  P++  +     A  AK +                             KR  + + GFL GLL SL++NAGGIASGK+H FRQGLRGGED       AAPRLGGAR+TELSRP E  QAP+A
Sbjct:   14 SARFYNGRLTDAPCVRDQAAIPAPSPSSEAT------GPLALPPLGPCFPPFLLVDVSSGSERRAGSSYQNPREASFVSAFLARLVAS---------GLRSGRGVKAGGXXXXXXXXXXXXRDREKS---GVVRVGIITPYRGQVHCIQQELSGGGG-------GRRLKGGVEDGGVDAEVSTVDGFQGKEVDVVLFSCVRAPSSGXXXXXXXXX------------IGFLADQRRMNVALTRARCSLIILGNVGRLSSDATWNALVDHSKSRERLEPEVVKARTSGGXXXXXXDGEALCARLEKAAAGKKGGRDRSGDRQGTGRNQAG--RGGRGEADDAVGS-----------RVADGSDGKEIQAPRRAA---GSRTGGHVRGDGSGGINVPDDRAAAAAVPPAVTDIEEHCADKRANPQHKPESGGSGQRRKPSWRGGDEVRPSARL-EESMRDRPPVEKHQQRHEEAGGAKPTPRGSACKRPDGGAANRPQKRARVYGQEAAKRVSTPDSGFLGGLLSSLSSNAGGIASGKEHDFRQGLRGGEDXXXXXXXAAPRLGGARVTELSRPVEREQAPSA 540          
BLAST of mRNA_L-elsbetiae_contig1770.5023.1 vs. uniprot
Match: W7TPV4_9STRA (Helicase sen1 n=3 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TPV4_9STRA)

HSP 1 Score: 231 bits (590), Expect = 3.560e-59
Identity = 156/427 (36.53%), Postives = 208/427 (48.71%), Query Frame = 0
Query:   13 RGDVLVAKQRRRDALRGLEVERGRIRRSLVSNAQARRRFRQVVCSTLSGCGSGPLIEAVSVSRKGFDTVIVDEACQATEPSTLIPLSLGCKRLILVGDPRQLPATVISQRAARLNLEVSLFERLERAGFPVHMLTVQYRMHPEIRSFPSARFYGGRLTDAPCVRSSSSXXXXXXXXXXXXXXXXRGGRSLMLGPCFPPFLVVDVGCGLERRVGNSYQNPREASFVAAFVERLVAAXXXXXXXSGGFHRGRGAEXXXXXXXXXXXXXXXXXSVESVGGRVVRVGVITPYRGQVQCIRQELGSGSXXXXXXXXSRRIQGGADGGGVDVEVSTVDGFQGKEVDVVLFSCVRAPSSXXXXXXXXXXXXXXXXXXXXXXIGFLADRRRMNVAITRARLSLVVLGNARRLSSDADWRALVEHAASRGRLVEEG 439
            R ++  AK+RR + L+ LE E+ RIR +L+ +A+       ++ STLS   S  L EAV+ + +GF TV++DEA QA EPSTLIPL  GC+ LILVGDPRQLPATV+S    +   + SLFERLE+ G PVH+L VQYRM P I  FPS  FY  +L++AP + ++                           P F  + V +V    E + GN+  N  EA F    + RL                                                 + VITPYR QV+ + + L              R++ G +G  +  EVST+DGFQG+E +V++FSCVRA                         IGFLAD RRMNV +TRAR SL VL +   L +D  WRA +E A  R  LV+ G
Sbjct: 2158 RSELYRAKRRRWECLKALEAEKSRIRNNLIRDAK-------IILSTLSTAASSQLAEAVTSTSRGFGTVVIDEAGQAVEPSTLIPLRYGCRNLILVGDPRQLPATVMSPVLQKYKYDRSLFERLEKGGHPVHLLRVQYRMRPPICRFPSQAFYHNKLSNAPALEAAEEDADGDLKRYDRV-------------PYFGAYRVFNVSSAREIKRGNAISNIEEAIFAVQLIARLRVEFPDLVAFK-------------------------------------HMAVITPYRAQVRLVEEHL--------------RVRFGEEGSSL-AEVSTIDGFQGREKEVIIFSCVRANPQGGT-------------------IGFLADERRMNVGLTRARRSLFVLCHRASLWTDRSWRAFIEDAEERQSLVDTG 2493          
BLAST of mRNA_L-elsbetiae_contig1770.5023.1 vs. uniprot
Match: A0A7S0I7L8_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0I7L8_MICPS)

HSP 1 Score: 206 bits (524), Expect = 4.780e-54
Identity = 141/408 (34.56%), Postives = 199/408 (48.77%), Query Frame = 0
Query:   32 VERGRIRRSLVSNAQARRRFRQVVCSTLSGCGSGPLIEAVSVSRKGFDTVIVDEACQATEPSTLIPLSLGCKRLILVGDPRQLPATVISQRAARLNLEVSLFERLERAGFPVHMLTVQYRMHPEIRSFPSARFYGGRLTDAPCVRSSSSXXXXXXXXXXXXXXXXRGGRSLMLGPCFPPFLVVDVGCGLERRVGNSYQNPREASFVAAFVERLVAAXXXXXXXSGGFHRGRGAEXXXXXXXXXXXXXXXXXSVESVGGRVVRVGVITPYRGQVQCIRQELGSGSXXXXXXXXSRRIQGGADGGGVDVEVSTVDGFQGKEVDVVLFSCVRAPSSXXXXXXXXXXXXXXXXXXXXXXIGFLADRRRMNVAITRARLSLVVLGNARRLSSDADWRALVEHAASRGRLVEEG 439
            +E+ R++ +++  A        VVCSTLS  GSG          + FD V++DEA QA EPSTL+PL  G K++ LVGDPRQLPATV+S  A   + + SLF+R E+ G+P+H+L  QYRMHP IR FPS +FY G L D P + + +                 R   + ML   F PF+ +DV     R  G S+ N  EA+   A V  LV                                       E   G   ++GVI+PY+ QV+ IR+ L            +R++           +V+++DGFQG+E DV +FS VRAP+                       +GF+AD RR+NV +TR++ SL+VLG+A+ L  D +W  LV  A  R  +V+ G
Sbjct:   18 LEKDRVKLAILDEAA-------VVCSTLSFSGSGMFARMT----RQFDVVVIDEAAQAVEPSTLVPLCYGAKQVFLVGDPRQLPATVLSSIATDHSYDQSLFKRFEQCGYPIHLLKTQYRMHPAIREFPSTQFYAGELEDGPKMAAKTK----------------RPWHNNML---FRPFVFIDVAGKEYRGGGMSWANDDEATLAVALVATLVKNY-----------------------------------AELASGE--KIGVISPYKAQVKNIRRRLAEA----LGEERARKV-----------DVNSIDGFQGREKDVCIFSVVRAPAKGRG-------------------LGFVADERRINVGLTRSKSSLIVLGSAKALKGDDNWGGLVASARDRNLIVKPG 324          
BLAST of mRNA_L-elsbetiae_contig1770.5023.1 vs. uniprot
Match: A0A7J8ZLE9_9ROSI (Uncharacterized protein n=2 Tax=Gossypium TaxID=3633 RepID=A0A7J8ZLE9_9ROSI)

HSP 1 Score: 204 bits (520), Expect = 5.820e-54
Identity = 141/389 (36.25%), Postives = 183/389 (47.04%), Query Frame = 0
Query:   54 VVCSTLSGCGSGPLIEAVSVSRKGFDTVIVDEACQATEPSTLIPLSLGCKRLILVGDPRQLPATVISQRAARLNLEVSLFERLERAGFPVHMLTVQYRMHPEIRSFPSARFYGGRLTDAPCVRSSSSXXXXXXXXXXXXXXXXRGGRSLMLGPCFPPFLVVDVGCGLERRVGNS--YQNPREASFVAAFVERLVAAXXXXXXXSGGFHRGRGAEXXXXXXXXXXXXXXXXXSVESVGGRVVRVGVITPYRGQVQCIRQELGSGSXXXXXXXXSRRIQGGADGGGVDVEVSTVDGFQGKEVDVVLFSCVRAPSSXXXXXXXXXXXXXXXXXXXXXXIGFLADRRRMNVAITRARLSLVVLGNARRLSSDADWRALVEHAASRGRLVEEGR 440
            +VCSTLS  GS  L +  S    GFD VI+DEA QA EP+TL+PLS GCK++ L+GDP QLPATVIS  A +     SLF+R +RAG+PV ML  QYRMHPEIRSFPS  FY   L D   V   ++                   R      CF PF   D+  G E +   S  + N  E  FV A   +L+         S                                     +  +I+PYR QV+ +++              S+R+          V++ T+DGFQG+E DVV+FSCVRA                         IGF++D RRMNV ITRA+ S++V+G+A  L  D  W  LVE A  RG L + G+
Sbjct:  110 IVCSTLSFSGSALLSKLSS----GFDVVIIDEAAQAVEPATLLPLSSGCKQVFLIGDPVQLPATVISPVAEKFGYATSLFKRFQRAGYPVKMLKTQYRMHPEIRSFPSKEFYDEALEDGSDVEDQTT-------------------REWHKYRCFGPFCFFDIHEGKESQPSGSGSWVNTDEIEFVLALYNKLITMHPELKSSS-------------------------------------QFAIISPYRHQVKLLQERF-----QETFGVESKRV----------VDIGTIDGFQGREKDVVIFSCVRASKDRG--------------------IGFVSDFRRMNVGITRAKSSVLVVGSASTLKRDEHWNNLVESAEERGCLFKVGK 403          
BLAST of mRNA_L-elsbetiae_contig1770.5023.1 vs. uniprot
Match: A0A061R7R4_9CHLO (Senataxin (Fragment) n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061R7R4_9CHLO)

HSP 1 Score: 200 bits (509), Expect = 2.610e-53
Identity = 145/397 (36.52%), Postives = 186/397 (46.85%), Query Frame = 0
Query:   41 LVSNAQARRRFRQVVCSTLSGCGSGPLIEAVSVSRKGFDTVIVDEACQATEPSTLIPLSLGCKRLILVGDPRQLPATVISQRAARLNLEVSLFERLERAGFPVHMLTVQYRMHPEIRSFPSARFYGGRLTDAPCVRSSSSXXXXXXXXXXXXXXXXRGGRSLMLGPCFPPFLVVDVGCGLERRVGN-SYQNPREASFVAAFVERLVAAXXXXXXXSGGFHRGRGAEXXXXXXXXXXXXXXXXXSVESVGGRVVRVGVITPYRGQVQCIRQELGSGSXXXXXXXXSRRIQGGADGGGVDVEVSTVDGFQGKEVDVVLFSCVRAPSSXXXXXXXXXXXXXXXXXXXXXXIGFLADRRRMNVAITRARLSLVVLGNARRLSSDADWRALVEHAASRGRLV 436
            LV NA+       ++ +TLS  G              F+TV++DEACQA+E S L PL  GC++ +LVGDP+QLPATV+S +A    +E SLFERL+ A  PVHML VQYRMHPEIR FPS  FY G+L D  C+   +                     SL+      P++  DV  G E R+G  S  N  EA   AA    L                                        E      V VGVITPYR Q  C+++   S             + G A  G V +E  TVD FQG+++DVV+ SCVRA  +                      IGF+ D RR+NVAITRA+L+L VLG+A  L     WRAL+E A  R R++
Sbjct:    5 LVKNAE-------IIFTTLSSSGRQIFSRLSERKCVKFETVLIDEACQASEVSVLQPLMYGCRKCVLVGDPQQLPATVLSLKAKEHQMERSLFERLQHASCPVHMLMVQYRMHPEIRHFPSDHFYEGKLQDGDCILQRADPPFYS--------------HSLL-----KPYIFFDVDQGRELRMGGRSLSNQAEADLAAALYVSLQKTLK-----------------------------------ELEWSEPVSVGVITPYREQRNCLKKTFKS-------------VCGEAKAGEVFIE--TVDSFQGRQLDVVMLSCVRASFARSG-------------------IGFVGDIRRLNVAITRAQLALWVLGDAATLGLSPTWRALIEDAERRRRII 306          
BLAST of mRNA_L-elsbetiae_contig1770.5023.1 vs. uniprot
Match: A0A175YEA1_DAUCS (Uncharacterized protein n=2 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A175YEA1_DAUCS)

HSP 1 Score: 201 bits (511), Expect = 1.330e-52
Identity = 143/405 (35.31%), Postives = 187/405 (46.17%), Query Frame = 0
Query:   33 ERGRIRRSLVSNAQARRRFRQVVCSTLSGCGSGPLIEAVSVSRKGFDTVIVDEACQATEPSTLIPLSLGCKRLILVGDPRQLPATVISQRAARLNLEVSLFERLERAGFPVHMLTVQYRMHPEIRSFPSARFYGGRLTDAPCVRSSSSXXXXXXXXXXXXXXXXRGGRSLMLGPCFPPFLVVDVGCGLERRVGNS--YQNPREASFVAAFVERLVAAXXXXXXXSGGFHRGRGAEXXXXXXXXXXXXXXXXXSVESVGGRVVRVGVITPYRGQVQCIRQELGSGSXXXXXXXXSRRIQGGADGGGVDVEVSTVDGFQGKEVDVVLFSCVRAPSSXXXXXXXXXXXXXXXXXXXXXXIGFLADRRRMNVAITRARLSLVVLGNARRLSSDADWRALVEHAASRGRL 435
            ++  IR S++  A        +V STLS  GS       S   + FD VI+DEA QA E +TL+PL+ GCK++ LVGDP QLPATVIS  A +    +SLF+R + AG+PV ML  QYRMHPEIRSFPS  FY   L D P V S +                    R+  +  CF PF   D+  G E +  NS  ++N  EA FV     +L+A        S                                     ++ +I+PYR QV   R +             S++           V+++TVDGFQG+E DV +FSCVRA                         IGF+AD RRMNV ITRAR S+ V+G+A  L  D  W+ L+E A  R  L
Sbjct:  108 DKNAIRNSILDEAA-------IVFSTLSFSGSS----LFSKLNRTFDVVIIDEAAQAIEAATLVPLANGCKQVFLVGDPLQLPATVISPVAEKFKYGMSLFKRFQEAGYPVQMLKTQYRMHPEIRSFPSKEFYKEALEDGPAVESETR-------------------RAWHIYSCFGPFCFFDLHEGKESQPSNSGSWENVDEAEFVVLMYHKLLARFVELKSSS-------------------------------------QIAIISPYRSQVSLFRDKF-----KDTFGEDSKKF----------VDINTVDGFQGREKDVAIFSCVRASKDKG--------------------IGFVADSRRMNVGITRARSSVWVVGSASTLRKDEHWKNLIESAEKRNAL 410          
BLAST of mRNA_L-elsbetiae_contig1770.5023.1 vs. uniprot
Match: A0A835ZGC2_9STRA (AAA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGC2_9STRA)

HSP 1 Score: 194 bits (494), Expect = 1.850e-52
Identity = 114/228 (50.00%), Postives = 139/228 (60.96%), Query Frame = 0
Query:   18 VAKQRRRDALRGLEVERGRIRRSLVSNAQARRRFRQVVCSTLSGCGSGPLIEAVSVSRKGFDTVIVDEACQATEPSTLIPLSLGCKRLILVGDPRQLPATVISQRAARLNLEVSLFERLERAGFPVHMLTVQYRMHPEIRSFPSARFYGGRLTDAPCVRSSSSXXXXXXXXXXXXXXXXRGGRSLMLGPCFPPFLVVDVGC-GLERRVGNSYQNPREASFVAAFVERL 244
            V ++ RR   + L+ ER R+R +L+SNAQ       VVC+TL+G G   L+EAV +S KGFD V+VDEA QA E + LIPL+LGCKRL LVGDPRQLPAT+ S+ AAR  LE SLFERLE AG  +HML  QYR HP IR+FPSARFYGGRL+DA  + +                   R        P   P +V D+G  G E + G S QN  EA+F    V RL
Sbjct:   50 VKRRTRRTLFKQLDSERKRLRNNLLSNAQ-------VVCATLAGAGHQDLVEAVYLSGKGFDHVVVDEAAQAVETAVLIPLALGCKRLTLVGDPRQLPATLKSRAAARAGLEASLFERLELAGHALHMLDTQYRCHPAIRAFPSARFYGGRLSDAAAIAT-------------------RAAPPHAADPALAPLVVYDLGRHGAEEQHGVSLQNSDEAAFAFDVVARL 251          
BLAST of mRNA_L-elsbetiae_contig1770.5023.1 vs. uniprot
Match: A0A5B7C6X9_DAVIN (Putative helicase MAGATAMA 3 isoform X1 n=2 Tax=Nyssaceae TaxID=4289 RepID=A0A5B7C6X9_DAVIN)

HSP 1 Score: 207 bits (527), Expect = 2.220e-52
Identity = 155/418 (37.08%), Postives = 196/418 (46.89%), Query Frame = 0
Query:   20 KQRRRDALRGLEVERGRIRRSLVSNAQARRRFRQVVCSTLSGCGSGPLIEAVSVSRKGFDTVIVDEACQATEPSTLIPLSLGCKRLILVGDPRQLPATVISQRAARLNLEVSLFERLERAGFPVHMLTVQYRMHPEIRSFPSARFYGGRLTDAPCVRSSSSXXXXXXXXXXXXXXXXRGGRSLMLGPCFPPFLVVDVGCGLERRVGNS--YQNPREASFVAAFVERLVAAXXXXXXXSGGFHRGRGAEXXXXXXXXXXXXXXXXXSVESVGGRVVRVGVITPYRGQVQCIRQELGSGSXXXXXXXXSRRIQGGADGGGVDVEVSTVDGFQGKEVDVVLFSCVRAPSSXXXXXXXXXXXXXXXXXXXXXXIGFLADRRRMNVAITRARLSLVVLGNARRLSSDADWRALVEHAASRGRL 435
            KQ++  A R +E+    IR SL+  A        +V STLS  GS       S S +GFD VI+DEA QA EP+TLIPL+ GCK++ LVGDP QLPATVIS  A +    +SLF+R +RAG+PV ML  QYRMHPEIRSFPS  FY   L D P V   ++                   RS     CF PF   D+  G E +   S  + N  E  FV     +LV         S                                     R+ +I+PYR QV+  RQ +            S +I          V+++TVDGFQG+E DV +FSCVRA                         IGF+AD RRMNV ITRAR +++V+G+A  L  D  W+ LVE A  R  L
Sbjct:  437 KQKQGRAERDIEI----IRSSLLDEAA-------IVFSTLSFSGSS----LFSKSNRGFDVVIIDEAAQAVEPATLIPLANGCKQVFLVGDPVQLPATVISPIAEKFGYGMSLFKRFQRAGYPVKMLKTQYRMHPEIRSFPSREFYAEALEDGPDVEDQTT-------------------RSWHKYRCFRPFCFFDIHEGKESQPSGSGSWVNNDEVEFVLLMYLKLVTRYPELKSSS-------------------------------------RLAIISPYRHQVKLFRQRI-----RDTFGMESDKI----------VDINTVDGFQGREKDVAIFSCVRASKDKG--------------------IGFVADFRRMNVGITRARSTVLVVGSAYSLKKDKHWKNLVESAEGRNSL 748          
BLAST of mRNA_L-elsbetiae_contig1770.5023.1 vs. uniprot
Match: A0A2G9H7N2_9LAMI (tRNA-splicing endonuclease positive effector (SEN1) n=1 Tax=Handroanthus impetiginosus TaxID=429701 RepID=A0A2G9H7N2_9LAMI)

HSP 1 Score: 203 bits (516), Expect = 6.400e-52
Identity = 147/410 (35.85%), Postives = 192/410 (46.83%), Query Frame = 0
Query:   29 GLEVERGRIRRSLVSNAQARRRFRQVVCSTLSGCGSGPLIEAVSVSRKGFDTVIVDEACQATEPSTLIPLSLGCKRLILVGDPRQLPATVISQRAARLNLEVSLFERLERAGFPVHMLTVQYRMHPEIRSFPSARFYGGRLTDAPCVRSSSSXXXXXXXXXXXXXXXXRGGRSLMLGPCFPPFLVVDVGCGLERRVGNS--YQNPREASFVAAFVERLVAAXXXXXXXSGGFHRGRGAEXXXXXXXXXXXXXXXXXSVESVGGRVVRVGVITPYRGQVQCIRQELGSGSXXXXXXXXSRRIQGGADGGGVDVEVSTVDGFQGKEVDVVLFSCVRAPSSXXXXXXXXXXXXXXXXXXXXXXIGFLADRRRMNVAITRARLSLVVLGNARRLSSDADWRALVEHAASRGRLV 436
            G+  ++  IR S++  A        +V STLS  GS       S   +GFD VI+DEA QA EP+TL+PL+ GCK++ LVGDP QLPATVIS  A +    +SLF+R + AG+PV ML  QYRM+PEIRSFPS  FY   L D P V   +                    RS     CF PF   D+  G E +   S  + N  E  FV A   +LV+        S                                     R+ +I+PYR QV+  R++  S          S ++          V+++TVDGFQG+E DV +FSCVRA                         IGF+AD RRMNV ITRAR S++V+G+A  L  D  W+ LVE A  R  L+
Sbjct:  264 GVTKDKDSIRASILDEAV-------IVFSTLSFSGSA----LFSKLNRGFDVVIIDEAAQAVEPATLVPLANGCKQVFLVGDPVQLPATVISPVAEKFGYGMSLFKRFQMAGYPVQMLKTQYRMNPEIRSFPSREFYNEALEDGPDVEEQTK-------------------RSWHKFRCFGPFCFFDIHEGKESQPSGSGSWVNVDEVEFVLAMYSKLVSRYPELKASS-------------------------------------RLAIISPYRHQVKLFREKFRS-----TFGVESDKV----------VDINTVDGFQGREKDVAIFSCVRASKDNG--------------------IGFVADFRRMNVGITRARSSVLVVGSASTLKRDDHWKNLVESAEQRNVLI 571          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1770.5023.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLI3_ECTSI1.770e-17451.98Presumed helicase required for RNA polymerase II t... [more]
A0A6H5J8A4_9PHAE6.060e-8043.20AAA_12 domain-containing protein n=1 Tax=Ectocarpu... [more]
W7TPV4_9STRA3.560e-5936.53Helicase sen1 n=3 Tax=Nannochloropsis gaditana Tax... [more]
A0A7S0I7L8_MICPS4.780e-5434.56Hypothetical protein n=1 Tax=Micromonas pusilla Ta... [more]
A0A7J8ZLE9_9ROSI5.820e-5436.25Uncharacterized protein n=2 Tax=Gossypium TaxID=36... [more]
A0A061R7R4_9CHLO2.610e-5336.52Senataxin (Fragment) n=2 Tax=Tetraselmis sp. GSL01... [more]
A0A175YEA1_DAUCS1.330e-5235.31Uncharacterized protein n=2 Tax=Daucus carota subs... [more]
A0A835ZGC2_9STRA1.850e-5250.00AAA domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A5B7C6X9_DAVIN2.220e-5237.08Putative helicase MAGATAMA 3 isoform X1 n=2 Tax=Ny... [more]
A0A2G9H7N2_9LAMI6.400e-5235.85tRNA-splicing endonuclease positive effector (SEN1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR041677DNA2/NAM7 helicase, AAA domainPFAMPF13086AAA_11coord: 52..121
e-value: 6.3E-28
score: 98.3
IPR041679DNA2/NAM7 helicase-like, AAA domainPFAMPF13087AAA_12coord: 129..413
e-value: 3.8E-50
score: 170.3
NoneNo IPR availableGENE3D3.40.50.300coord: 1..149
e-value: 4.0E-33
score: 116.9
NoneNo IPR availablePANTHERPTHR10887DNA2/NAM7 HELICASE FAMILYcoord: 13..493
NoneNo IPR availablePANTHERPTHR10887:SF382HELICASE SENATAXIN-RELATEDcoord: 13..493
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 48..429

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1770contigL-elsbetiae_contig1770:270..11957 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1770.5023.1mRNA_L-elsbetiae_contig1770.5023.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1770 270..11957 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1770.5023.1 ID=prot_L-elsbetiae_contig1770.5023.1|Name=mRNA_L-elsbetiae_contig1770.5023.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=879bp
RRHQLNTQIRRLRGDVLVAKQRRRDALRGLEVERGRIRRSLVSNAQARRR
FRQVVCSTLSGCGSGPLIEAVSVSRKGFDTVIVDEACQATEPSTLIPLSL
GCKRLILVGDPRQLPATVISQRAARLNLEVSLFERLERAGFPVHMLTVQY
RMHPEIRSFPSARFYGGRLTDAPCVRSSSSPPPPPSPSPSPPGGGGRGGR
SLMLGPCFPPFLVVDVGCGLERRVGNSYQNPREASFVAAFVERLVAAAAT
AAATSGGFHRGRGAEGAGGGGGGGGGGGGGGGSVESVGGRVVRVGVITPY
RGQVQCIRQELGSGSSSGSGSGSSRRIQGGADGGGVDVEVSTVDGFQGKE
VDVVLFSCVRAPSSSSAYGGGGHHGNNGGGRGGGGGIGFLADRRRMNVAI
TRARLSLVVLGNARRLSSDADWRALVEHAASRGRLVEEGRAGDGGPEEVF
ARLEAGAAGSAGRAPAPDAAAKRSRKGEDGGRSPRRSYPDADSARDGGDG
GDGGGMAARGGDARTTATSRKHAEAPGIQPGSTKPPGGQRSRRQRGDSAA
ERGGARPPDGDGGGTDSGRQTAGGRTSRQQKLARRRGSTADGEPRPPPIR
AGDVAGRDHAPIQPVRAGAASAAAAKGSAVSAAAAEGSAAAGPKRRGGGA
QRPPKRPRSVNEGFLAGLLGSLTANAGGIASGKDHAFRQGLRGGEDDTRK
RAAAAPRLGGARLTELSRPREPRQAPAAAAFAPAPAPRDHQQTSGRAAAA
DSASGALGRDNKRSGSSGDRGGGGESRKRTAAAIPARQVQRPASGGGTRR
SGGGGPRGSGPGAGGEPGGIATRPPTSRGSGRAGNGSSGSSGGKVGGARK
GGSGPRGGTSSVAGMGVMDILKAMDDSWG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041677DNA2/NAM7_AAA_11
IPR041679DNA2/NAM7-like_AAA
IPR027417P-loop_NTPase