mRNA_L-elsbetiae_contig1770.5023.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1770.5023.1 vs. uniprot
Match: D8LLI3_ECTSI (Presumed helicase required for RNA polymerase II transcription termination and processing of RNAs n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLI3_ECTSI) HSP 1 Score: 546 bits (1407), Expect = 1.770e-174 Identity = 394/758 (51.98%), Postives = 440/758 (58.05%), Query Frame = 1 Query: 1 RRHQLNTQIRRLRGDVLVAKQRRRDALRGLEVERGRIRRSLVSNAQARRRFRQVVCSTLSGCGSGPLIEAVSVSRKGFDTVIVDEACQATEPSTLIPLSLGCKRLILVGDPRQLPATVISQRAARLNLEVSLFERLERAGFPVHMLTVQYRMHPEIRSFPSARFYGGRLTDAPCVRSSSSXXXXXXXXXXXXXXXXRGGRSLMLGPCFPPFLVVDVGCGLERRVGNSYQNPREASFVAAFVERLVAAXXXXXXXSGGFHRGRGAEXXXXXXXXXXXXXXXXXSVESVGGRVVRVGVITPYRGQVQCIRQELGSGSXXXXXXXXSRRIQGGADGGGVDVEVSTVDGFQGKEVDVVLFSCVRAPSSXXXXXXXXXXXXXXXXXXXXXXIGFLADRRRMNVAITRARLSLVVLGNARRLSSDADWRALVEHAASRGRLVEEGRAGDGGPEEVFARLEAGAAGXXXXXXXXXXXXXXXXXXXXXXRSPRRSYPDAXXXXXXXXXXXXXGMAARGGDARTTATSRK---------HAEAPGIQPGSTKP-------PGGQRSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLARRRG--STADGEPRPPPIRAGD----VAG-----RDHAPIQPVRAGAASAAAAKGSXXXXXXXXXXXXXXXXXXXXXXXXXP---KRPRSVNEGFLAGLLGSLTANAGGIASGKDHAFRQGLRGGEDDTRKRAAAAPRLGGARLTELSRPREPRQAPAA 2184 RRHQLNT IRRLRG++LVAKQRRRDALR LEVERG+IRRSLV VC+TLSGCGSGP++EAVS+S KGFDTVIVDEACQATEPSTLIPLSLGCKRLILVGDPRQLPATVISQRAARLNLEVSLFERLERAG+PVHMLTVQYRMHPEIR+FPSARFY GRLTDAPCVR ++ LGPCFPPFL+VDV G ERR G+SYQNPREASFV+AF+ RLVA+ G GRG + XXXXXXXXXX V VRVGVITPYRGQV CI+QEL XXXXXX R++GG + GGVD EVSTVDGFQGKEVDVVLFSCVRAPSS XXXXXX IGFLAD+RRMNVA+TRAR SLVVLGN RLSSD W+ALV+H+ SR RL PE V AR G XXX +A G R GD ++T +R A G+ GS K P G R+ + R S G+ R P R GD AG RD P+ + A AK + KR + + GFL GLL SL++NAGGIASGK+H FRQGLRGGED+ R+R AAAPRLGGAR+TELSRP EP+QAP A Sbjct: 345 RRHQLNTHIRRLRGELLVAKQRRRDALRSLEVERGKIRRSLV------------VCATLSGCGSGPMVEAVSLSGKGFDTVIVDEACQATEPSTLIPLSLGCKRLILVGDPRQLPATVISQRAARLNLEVSLFERLERAGYPVHMLTVQYRMHPEIRAFPSARFYNGRLTDAPCVRDQAAIPAQSPSSETTALPP--------LGPCFPPFLLVDVSSGSERRAGSSYQNPREASFVSAFLARLVAS---------GLRSGRGVKAGGXXXXXXXXXXGQDREKSGV----VRVGVITPYRGQVHCIQQELSG----XXXXXXXXRLKGGVEDGGVDAEVSTVDGFQGKEVDVVLFSCVRAPSSGXXXXXX---------------IGFLADQRRMNVALTRARRSLVVLGNVGRLSSDGTWKALVDHSKSRDRLE---------PEAVKARTSGGXXXXXXDG-------------------------EALCARLEETAAGKKGGRDRSGDRQSTGRNRAGRGGRGEADDAVGSGVAGGSDKKEIQAPRRPAGSRTGGHGRGDGSGGINVPDDRAAAAVVVPPAVADIGEHCADRRANPRHEPESVGSGQRRKPSSRGGDGVRPSAGLEGSVRDRPPVDKRQQRHEEAGGAKPTPRGSACRRPDGGAANRPQKRARADGQGAAKRVSTPDGGFLGGLLSSLSSNAGGIASGKEHDFRQGLRGGEDEERRRVAAAPRLGGARVTELSRPVEPKQAPPA 1016
BLAST of mRNA_L-elsbetiae_contig1770.5023.1 vs. uniprot
Match: A0A6H5J8A4_9PHAE (AAA_12 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8A4_9PHAE) HSP 1 Score: 283 bits (724), Expect = 6.060e-80 Identity = 251/581 (43.20%), Postives = 292/581 (50.26%), Query Frame = 1 Query: 481 SARFYGGRLTDAPCVRSSSSXXXXXXXXXXXXXXXXRGGRSLM-LGPCFPPFLVVDVGCGLERRVGNSYQNPREASFVAAFVERLVAAXXXXXXXSGGFHRGRGAEXXXXXXXXXXXXXXXXXSVESVGGRVVRVGVITPYRGQVQCIRQELGSGSXXXXXXXXSRRIQGGADGGGVDVEVSTVDGFQGKEVDVVLFSCVRAPSSXXXXXXXXXXXXXXXXXXXXXXIGFLADRRRMNVAITRARLSLVVLGNARRLSSDADWRALVEHAASRGRL---VEEGRAGDGGP------EEVFARLEAGAAGXXXXXXXXXXXXXXXXXXXXXXRSPRRSYPDAXXXXXXXXXXXXXGMAARGGDARTTATSRKHAEAPGIQPGSTKPPGGQRSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLARRRGSTADGEPRPPPIRAGDVAGRDHAPIQPVRAGAASAAAAKGSXXXXXXXXXXXXXXXXXXXXXXXXXP---KRPRSVNEGFLAGLLGSLTANAGGIASGKDHAFRQGLRGGEDDTRKRAAAAPRLGGARLTELSRPREPRQAPAA 2184 SARFY GRLTDAPCVR ++ G +L LGPCFPPFL+VDV G ERR G+SYQNPREASFV+AF+ RLVA+ G GRG + XXXXXXXXXXXX +S VVRVG+ITPYRGQV CI+QEL G RR++GG + GGVD EVSTVDGFQGKEVDVVLFSCVRAPSS XXXXXXXXX IGFLAD+RRMNVA+TRAR SL++LGN RLSSDA W ALV+H+ SR RL V + R G E + ARLE AAG R R DA A G D + R+ A G + G G RR+ S G+ P R + + RD P++ + A AK + KR + + GFL GLL SL++NAGGIASGK+H FRQGLRGGED AAPRLGGAR+TELSRP E QAP+A Sbjct: 14 SARFYNGRLTDAPCVRDQAAIPAPSPSSEAT------GPLALPPLGPCFPPFLLVDVSSGSERRAGSSYQNPREASFVSAFLARLVAS---------GLRSGRGVKAGGXXXXXXXXXXXXRDREKS---GVVRVGIITPYRGQVHCIQQELSGGGG-------GRRLKGGVEDGGVDAEVSTVDGFQGKEVDVVLFSCVRAPSSGXXXXXXXXX------------IGFLADQRRMNVALTRARCSLIILGNVGRLSSDATWNALVDHSKSRERLEPEVVKARTSGGXXXXXXDGEALCARLEKAAAGKKGGRDRSGDRQGTGRNQAG--RGGRGEADDAVGS-----------RVADGSDGKEIQAPRRAA---GSRTGGHVRGDGSGGINVPDDRAAAAAVPPAVTDIEEHCADKRANPQHKPESGGSGQRRKPSWRGGDEVRPSARL-EESMRDRPPVEKHQQRHEEAGGAKPTPRGSACKRPDGGAANRPQKRARVYGQEAAKRVSTPDSGFLGGLLSSLSSNAGGIASGKEHDFRQGLRGGEDXXXXXXXAAPRLGGARVTELSRPVEREQAPSA 540
BLAST of mRNA_L-elsbetiae_contig1770.5023.1 vs. uniprot
Match: W7TPV4_9STRA (Helicase sen1 n=3 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TPV4_9STRA) HSP 1 Score: 231 bits (590), Expect = 3.560e-59 Identity = 156/427 (36.53%), Postives = 208/427 (48.71%), Query Frame = 1 Query: 37 RGDVLVAKQRRRDALRGLEVERGRIRRSLVSNAQARRRFRQVVCSTLSGCGSGPLIEAVSVSRKGFDTVIVDEACQATEPSTLIPLSLGCKRLILVGDPRQLPATVISQRAARLNLEVSLFERLERAGFPVHMLTVQYRMHPEIRSFPSARFYGGRLTDAPCVRSSSSXXXXXXXXXXXXXXXXRGGRSLMLGPCFPPFLVVDVGCGLERRVGNSYQNPREASFVAAFVERLVAAXXXXXXXSGGFHRGRGAEXXXXXXXXXXXXXXXXXSVESVGGRVVRVGVITPYRGQVQCIRQELGSGSXXXXXXXXSRRIQGGADGGGVDVEVSTVDGFQGKEVDVVLFSCVRAPSSXXXXXXXXXXXXXXXXXXXXXXIGFLADRRRMNVAITRARLSLVVLGNARRLSSDADWRALVEHAASRGRLVEEG 1317 R ++ AK+RR + L+ LE E+ RIR +L+ +A+ ++ STLS S L EAV+ + +GF TV++DEA QA EPSTLIPL GC+ LILVGDPRQLPATV+S + + SLFERLE+ G PVH+L VQYRM P I FPS FY +L++AP + ++ P F + V +V E + GN+ N EA F + RL + VITPYR QV+ + + L R++ G +G + EVST+DGFQG+E +V++FSCVRA IGFLAD RRMNV +TRAR SL VL + L +D WRA +E A R LV+ G Sbjct: 2158 RSELYRAKRRRWECLKALEAEKSRIRNNLIRDAK-------IILSTLSTAASSQLAEAVTSTSRGFGTVVIDEAGQAVEPSTLIPLRYGCRNLILVGDPRQLPATVMSPVLQKYKYDRSLFERLEKGGHPVHLLRVQYRMRPPICRFPSQAFYHNKLSNAPALEAAEEDADGDLKRYDRV-------------PYFGAYRVFNVSSAREIKRGNAISNIEEAIFAVQLIARLRVEFPDLVAFK-------------------------------------HMAVITPYRAQVRLVEEHL--------------RVRFGEEGSSL-AEVSTIDGFQGREKEVIIFSCVRANPQGGT-------------------IGFLADERRMNVGLTRARRSLFVLCHRASLWTDRSWRAFIEDAEERQSLVDTG 2493
BLAST of mRNA_L-elsbetiae_contig1770.5023.1 vs. uniprot
Match: A0A7S0I7L8_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0I7L8_MICPS) HSP 1 Score: 206 bits (524), Expect = 4.780e-54 Identity = 141/408 (34.56%), Postives = 199/408 (48.77%), Query Frame = 1 Query: 94 VERGRIRRSLVSNAQARRRFRQVVCSTLSGCGSGPLIEAVSVSRKGFDTVIVDEACQATEPSTLIPLSLGCKRLILVGDPRQLPATVISQRAARLNLEVSLFERLERAGFPVHMLTVQYRMHPEIRSFPSARFYGGRLTDAPCVRSSSSXXXXXXXXXXXXXXXXRGGRSLMLGPCFPPFLVVDVGCGLERRVGNSYQNPREASFVAAFVERLVAAXXXXXXXSGGFHRGRGAEXXXXXXXXXXXXXXXXXSVESVGGRVVRVGVITPYRGQVQCIRQELGSGSXXXXXXXXSRRIQGGADGGGVDVEVSTVDGFQGKEVDVVLFSCVRAPSSXXXXXXXXXXXXXXXXXXXXXXIGFLADRRRMNVAITRARLSLVVLGNARRLSSDADWRALVEHAASRGRLVEEG 1317 +E+ R++ +++ A VVCSTLS GSG + FD V++DEA QA EPSTL+PL G K++ LVGDPRQLPATV+S A + + SLF+R E+ G+P+H+L QYRMHP IR FPS +FY G L D P + + + R + ML F PF+ +DV R G S+ N EA+ A V LV E G ++GVI+PY+ QV+ IR+ L +R++ +V+++DGFQG+E DV +FS VRAP+ +GF+AD RR+NV +TR++ SL+VLG+A+ L D +W LV A R +V+ G Sbjct: 18 LEKDRVKLAILDEAA-------VVCSTLSFSGSGMFARMT----RQFDVVVIDEAAQAVEPSTLVPLCYGAKQVFLVGDPRQLPATVLSSIATDHSYDQSLFKRFEQCGYPIHLLKTQYRMHPAIREFPSTQFYAGELEDGPKMAAKTK----------------RPWHNNML---FRPFVFIDVAGKEYRGGGMSWANDDEATLAVALVATLVKNY-----------------------------------AELASGE--KIGVISPYKAQVKNIRRRLAEA----LGEERARKV-----------DVNSIDGFQGREKDVCIFSVVRAPAKGRG-------------------LGFVADERRINVGLTRSKSSLIVLGSAKALKGDDNWGGLVASARDRNLIVKPG 324
BLAST of mRNA_L-elsbetiae_contig1770.5023.1 vs. uniprot
Match: A0A7J8ZLE9_9ROSI (Uncharacterized protein n=2 Tax=Gossypium TaxID=3633 RepID=A0A7J8ZLE9_9ROSI) HSP 1 Score: 204 bits (520), Expect = 5.820e-54 Identity = 141/389 (36.25%), Postives = 183/389 (47.04%), Query Frame = 1 Query: 160 VVCSTLSGCGSGPLIEAVSVSRKGFDTVIVDEACQATEPSTLIPLSLGCKRLILVGDPRQLPATVISQRAARLNLEVSLFERLERAGFPVHMLTVQYRMHPEIRSFPSARFYGGRLTDAPCVRSSSSXXXXXXXXXXXXXXXXRGGRSLMLGPCFPPFLVVDVGCGLERRVGNS--YQNPREASFVAAFVERLVAAXXXXXXXSGGFHRGRGAEXXXXXXXXXXXXXXXXXSVESVGGRVVRVGVITPYRGQVQCIRQELGSGSXXXXXXXXSRRIQGGADGGGVDVEVSTVDGFQGKEVDVVLFSCVRAPSSXXXXXXXXXXXXXXXXXXXXXXIGFLADRRRMNVAITRARLSLVVLGNARRLSSDADWRALVEHAASRGRLVEEGR 1320 +VCSTLS GS L + S GFD VI+DEA QA EP+TL+PLS GCK++ L+GDP QLPATVIS A + SLF+R +RAG+PV ML QYRMHPEIRSFPS FY L D V ++ R CF PF D+ G E + S + N E FV A +L+ S + +I+PYR QV+ +++ S+R+ V++ T+DGFQG+E DVV+FSCVRA IGF++D RRMNV ITRA+ S++V+G+A L D W LVE A RG L + G+ Sbjct: 110 IVCSTLSFSGSALLSKLSS----GFDVVIIDEAAQAVEPATLLPLSSGCKQVFLIGDPVQLPATVISPVAEKFGYATSLFKRFQRAGYPVKMLKTQYRMHPEIRSFPSKEFYDEALEDGSDVEDQTT-------------------REWHKYRCFGPFCFFDIHEGKESQPSGSGSWVNTDEIEFVLALYNKLITMHPELKSSS-------------------------------------QFAIISPYRHQVKLLQERF-----QETFGVESKRV----------VDIGTIDGFQGREKDVVIFSCVRASKDRG--------------------IGFVSDFRRMNVGITRAKSSVLVVGSASTLKRDEHWNNLVESAEERGCLFKVGK 403
BLAST of mRNA_L-elsbetiae_contig1770.5023.1 vs. uniprot
Match: A0A061R7R4_9CHLO (Senataxin (Fragment) n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061R7R4_9CHLO) HSP 1 Score: 200 bits (509), Expect = 2.610e-53 Identity = 145/397 (36.52%), Postives = 186/397 (46.85%), Query Frame = 1 Query: 121 LVSNAQARRRFRQVVCSTLSGCGSGPLIEAVSVSRKGFDTVIVDEACQATEPSTLIPLSLGCKRLILVGDPRQLPATVISQRAARLNLEVSLFERLERAGFPVHMLTVQYRMHPEIRSFPSARFYGGRLTDAPCVRSSSSXXXXXXXXXXXXXXXXRGGRSLMLGPCFPPFLVVDVGCGLERRVGN-SYQNPREASFVAAFVERLVAAXXXXXXXSGGFHRGRGAEXXXXXXXXXXXXXXXXXSVESVGGRVVRVGVITPYRGQVQCIRQELGSGSXXXXXXXXSRRIQGGADGGGVDVEVSTVDGFQGKEVDVVLFSCVRAPSSXXXXXXXXXXXXXXXXXXXXXXIGFLADRRRMNVAITRARLSLVVLGNARRLSSDADWRALVEHAASRGRLV 1308 LV NA+ ++ +TLS G F+TV++DEACQA+E S L PL GC++ +LVGDP+QLPATV+S +A +E SLFERL+ A PVHML VQYRMHPEIR FPS FY G+L D C+ + SL+ P++ DV G E R+G S N EA AA L E V VGVITPYR Q C+++ S + G A G V +E TVD FQG+++DVV+ SCVRA + IGF+ D RR+NVAITRA+L+L VLG+A L WRAL+E A R R++ Sbjct: 5 LVKNAE-------IIFTTLSSSGRQIFSRLSERKCVKFETVLIDEACQASEVSVLQPLMYGCRKCVLVGDPQQLPATVLSLKAKEHQMERSLFERLQHASCPVHMLMVQYRMHPEIRHFPSDHFYEGKLQDGDCILQRADPPFYS--------------HSLL-----KPYIFFDVDQGRELRMGGRSLSNQAEADLAAALYVSLQKTLK-----------------------------------ELEWSEPVSVGVITPYREQRNCLKKTFKS-------------VCGEAKAGEVFIE--TVDSFQGRQLDVVMLSCVRASFARSG-------------------IGFVGDIRRLNVAITRAQLALWVLGDAATLGLSPTWRALIEDAERRRRII 306
BLAST of mRNA_L-elsbetiae_contig1770.5023.1 vs. uniprot
Match: A0A175YEA1_DAUCS (Uncharacterized protein n=2 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A175YEA1_DAUCS) HSP 1 Score: 201 bits (511), Expect = 1.330e-52 Identity = 143/405 (35.31%), Postives = 187/405 (46.17%), Query Frame = 1 Query: 97 ERGRIRRSLVSNAQARRRFRQVVCSTLSGCGSGPLIEAVSVSRKGFDTVIVDEACQATEPSTLIPLSLGCKRLILVGDPRQLPATVISQRAARLNLEVSLFERLERAGFPVHMLTVQYRMHPEIRSFPSARFYGGRLTDAPCVRSSSSXXXXXXXXXXXXXXXXRGGRSLMLGPCFPPFLVVDVGCGLERRVGNS--YQNPREASFVAAFVERLVAAXXXXXXXSGGFHRGRGAEXXXXXXXXXXXXXXXXXSVESVGGRVVRVGVITPYRGQVQCIRQELGSGSXXXXXXXXSRRIQGGADGGGVDVEVSTVDGFQGKEVDVVLFSCVRAPSSXXXXXXXXXXXXXXXXXXXXXXIGFLADRRRMNVAITRARLSLVVLGNARRLSSDADWRALVEHAASRGRL 1305 ++ IR S++ A +V STLS GS S + FD VI+DEA QA E +TL+PL+ GCK++ LVGDP QLPATVIS A + +SLF+R + AG+PV ML QYRMHPEIRSFPS FY L D P V S + R+ + CF PF D+ G E + NS ++N EA FV +L+A S ++ +I+PYR QV R + S++ V+++TVDGFQG+E DV +FSCVRA IGF+AD RRMNV ITRAR S+ V+G+A L D W+ L+E A R L Sbjct: 108 DKNAIRNSILDEAA-------IVFSTLSFSGSS----LFSKLNRTFDVVIIDEAAQAIEAATLVPLANGCKQVFLVGDPLQLPATVISPVAEKFKYGMSLFKRFQEAGYPVQMLKTQYRMHPEIRSFPSKEFYKEALEDGPAVESETR-------------------RAWHIYSCFGPFCFFDLHEGKESQPSNSGSWENVDEAEFVVLMYHKLLARFVELKSSS-------------------------------------QIAIISPYRSQVSLFRDKF-----KDTFGEDSKKF----------VDINTVDGFQGREKDVAIFSCVRASKDKG--------------------IGFVADSRRMNVGITRARSSVWVVGSASTLRKDEHWKNLIESAEKRNAL 410
BLAST of mRNA_L-elsbetiae_contig1770.5023.1 vs. uniprot
Match: A0A835ZGC2_9STRA (AAA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGC2_9STRA) HSP 1 Score: 194 bits (494), Expect = 1.850e-52 Identity = 114/228 (50.00%), Postives = 139/228 (60.96%), Query Frame = 1 Query: 52 VAKQRRRDALRGLEVERGRIRRSLVSNAQARRRFRQVVCSTLSGCGSGPLIEAVSVSRKGFDTVIVDEACQATEPSTLIPLSLGCKRLILVGDPRQLPATVISQRAARLNLEVSLFERLERAGFPVHMLTVQYRMHPEIRSFPSARFYGGRLTDAPCVRSSSSXXXXXXXXXXXXXXXXRGGRSLMLGPCFPPFLVVDVGC-GLERRVGNSYQNPREASFVAAFVERL 732 V ++ RR + L+ ER R+R +L+SNAQ VVC+TL+G G L+EAV +S KGFD V+VDEA QA E + LIPL+LGCKRL LVGDPRQLPAT+ S+ AAR LE SLFERLE AG +HML QYR HP IR+FPSARFYGGRL+DA + + R P P +V D+G G E + G S QN EA+F V RL Sbjct: 50 VKRRTRRTLFKQLDSERKRLRNNLLSNAQ-------VVCATLAGAGHQDLVEAVYLSGKGFDHVVVDEAAQAVETAVLIPLALGCKRLTLVGDPRQLPATLKSRAAARAGLEASLFERLELAGHALHMLDTQYRCHPAIRAFPSARFYGGRLSDAAAIAT-------------------RAAPPHAADPALAPLVVYDLGRHGAEEQHGVSLQNSDEAAFAFDVVARL 251
BLAST of mRNA_L-elsbetiae_contig1770.5023.1 vs. uniprot
Match: A0A5B7C6X9_DAVIN (Putative helicase MAGATAMA 3 isoform X1 n=2 Tax=Nyssaceae TaxID=4289 RepID=A0A5B7C6X9_DAVIN) HSP 1 Score: 207 bits (527), Expect = 2.220e-52 Identity = 155/418 (37.08%), Postives = 196/418 (46.89%), Query Frame = 1 Query: 58 KQRRRDALRGLEVERGRIRRSLVSNAQARRRFRQVVCSTLSGCGSGPLIEAVSVSRKGFDTVIVDEACQATEPSTLIPLSLGCKRLILVGDPRQLPATVISQRAARLNLEVSLFERLERAGFPVHMLTVQYRMHPEIRSFPSARFYGGRLTDAPCVRSSSSXXXXXXXXXXXXXXXXRGGRSLMLGPCFPPFLVVDVGCGLERRVGNS--YQNPREASFVAAFVERLVAAXXXXXXXSGGFHRGRGAEXXXXXXXXXXXXXXXXXSVESVGGRVVRVGVITPYRGQVQCIRQELGSGSXXXXXXXXSRRIQGGADGGGVDVEVSTVDGFQGKEVDVVLFSCVRAPSSXXXXXXXXXXXXXXXXXXXXXXIGFLADRRRMNVAITRARLSLVVLGNARRLSSDADWRALVEHAASRGRL 1305 KQ++ A R +E+ IR SL+ A +V STLS GS S S +GFD VI+DEA QA EP+TLIPL+ GCK++ LVGDP QLPATVIS A + +SLF+R +RAG+PV ML QYRMHPEIRSFPS FY L D P V ++ RS CF PF D+ G E + S + N E FV +LV S R+ +I+PYR QV+ RQ + S +I V+++TVDGFQG+E DV +FSCVRA IGF+AD RRMNV ITRAR +++V+G+A L D W+ LVE A R L Sbjct: 437 KQKQGRAERDIEI----IRSSLLDEAA-------IVFSTLSFSGSS----LFSKSNRGFDVVIIDEAAQAVEPATLIPLANGCKQVFLVGDPVQLPATVISPIAEKFGYGMSLFKRFQRAGYPVKMLKTQYRMHPEIRSFPSREFYAEALEDGPDVEDQTT-------------------RSWHKYRCFRPFCFFDIHEGKESQPSGSGSWVNNDEVEFVLLMYLKLVTRYPELKSSS-------------------------------------RLAIISPYRHQVKLFRQRI-----RDTFGMESDKI----------VDINTVDGFQGREKDVAIFSCVRASKDKG--------------------IGFVADFRRMNVGITRARSTVLVVGSAYSLKKDKHWKNLVESAEGRNSL 748
BLAST of mRNA_L-elsbetiae_contig1770.5023.1 vs. uniprot
Match: A0A2G9H7N2_9LAMI (tRNA-splicing endonuclease positive effector (SEN1) n=1 Tax=Handroanthus impetiginosus TaxID=429701 RepID=A0A2G9H7N2_9LAMI) HSP 1 Score: 203 bits (516), Expect = 6.400e-52 Identity = 147/410 (35.85%), Postives = 192/410 (46.83%), Query Frame = 1 Query: 85 GLEVERGRIRRSLVSNAQARRRFRQVVCSTLSGCGSGPLIEAVSVSRKGFDTVIVDEACQATEPSTLIPLSLGCKRLILVGDPRQLPATVISQRAARLNLEVSLFERLERAGFPVHMLTVQYRMHPEIRSFPSARFYGGRLTDAPCVRSSSSXXXXXXXXXXXXXXXXRGGRSLMLGPCFPPFLVVDVGCGLERRVGNS--YQNPREASFVAAFVERLVAAXXXXXXXSGGFHRGRGAEXXXXXXXXXXXXXXXXXSVESVGGRVVRVGVITPYRGQVQCIRQELGSGSXXXXXXXXSRRIQGGADGGGVDVEVSTVDGFQGKEVDVVLFSCVRAPSSXXXXXXXXXXXXXXXXXXXXXXIGFLADRRRMNVAITRARLSLVVLGNARRLSSDADWRALVEHAASRGRLV 1308 G+ ++ IR S++ A +V STLS GS S +GFD VI+DEA QA EP+TL+PL+ GCK++ LVGDP QLPATVIS A + +SLF+R + AG+PV ML QYRM+PEIRSFPS FY L D P V + RS CF PF D+ G E + S + N E FV A +LV+ S R+ +I+PYR QV+ R++ S S ++ V+++TVDGFQG+E DV +FSCVRA IGF+AD RRMNV ITRAR S++V+G+A L D W+ LVE A R L+ Sbjct: 264 GVTKDKDSIRASILDEAV-------IVFSTLSFSGSA----LFSKLNRGFDVVIIDEAAQAVEPATLVPLANGCKQVFLVGDPVQLPATVISPVAEKFGYGMSLFKRFQMAGYPVQMLKTQYRMNPEIRSFPSREFYNEALEDGPDVEEQTK-------------------RSWHKFRCFGPFCFFDIHEGKESQPSGSGSWVNVDEVEFVLAMYSKLVSRYPELKASS-------------------------------------RLAIISPYRHQVKLFREKFRS-----TFGVESDKV----------VDINTVDGFQGREKDVAIFSCVRASKDNG--------------------IGFVADFRRMNVGITRARSSVLVVGSASTLKRDDHWKNLVESAEQRNVLI 571 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1770.5023.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1770.5023.1 >prot_L-elsbetiae_contig1770.5023.1 ID=prot_L-elsbetiae_contig1770.5023.1|Name=mRNA_L-elsbetiae_contig1770.5023.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=879bp RRHQLNTQIRRLRGDVLVAKQRRRDALRGLEVERGRIRRSLVSNAQARRRback to top mRNA from alignment at L-elsbetiae_contig1770:270..11957+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1770.5023.1 ID=mRNA_L-elsbetiae_contig1770.5023.1|Name=mRNA_L-elsbetiae_contig1770.5023.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=11688bp|location=Sequence derived from alignment at L-elsbetiae_contig1770:270..11957+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1770:270..11957+ >mRNA_L-elsbetiae_contig1770.5023.1 ID=mRNA_L-elsbetiae_contig1770.5023.1|Name=mRNA_L-elsbetiae_contig1770.5023.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=5274bp|location=Sequence derived from alignment at L-elsbetiae_contig1770:270..11957+ (Laminarionema elsbetiae ELsaHSoW15)back to top |