prot_L-elsbetiae_contig1764.4980.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig1764.4980.1
Unique Name	prot_L-elsbetiae_contig1764.4980.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	182

Homology

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BLAST of mRNA_L-elsbetiae_contig1764.4980.1 vs. uniprot
Match: D8LC29_ECTSI (tRNA-uridine aminocarboxypropyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC29_ECTSI)

HSP 1 Score: 282 bits (722), Expect = 1.080e-92
Identity = 128/184 (69.57%), Postives = 150/184 (81.52%), Query Frame = 0

Query:    2 SSLDEYLDNPPDIKLWPESRQGCHGCGKRGRLYCSDCLVFVGTPTGVKTPTELRLPLQVDIVVTAKERKRSSGIHIAVAAPQSVRVVPFE-EADDGLPT--YQPGRDLVVFPSETSVCWSELSEGELSAARRIILVDCRWVQTGTVMGHPRLRGLRHVRIDNPPTVSRFWRWHIEGEGHICTAE 182
            S+++EYL+ PPDI LWP+ RQ CH CGKR RLYC DCL+ VGTP GV+TPTELRLPLQVD+VVTA+ER+RSSG+H+AV APQSVRVV FE    D L +  Y+P  D VVFPS  SVCWSELSE +L+  RR+IL+D RWV TG V+GHP+L+GLRHVRI  PP VS+FWRWH EGEGHICTAE
Sbjct:    9 SAMEEYLERPPDINLWPQGRQECHRCGKRVRLYCPDCLILVGTPDGVETPTELRLPLQVDVVVTAEERRRSSGVHVAVMAPQSVRVVSFEGSGGDDLSSCSYRPESDFVVFPSAASVCWSELSEEDLARVRRVILIDSRWVNTGAVVGHPKLKGLRHVRIREPPAVSQFWRWHTEGEGHICTAE 192

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BLAST of mRNA_L-elsbetiae_contig1764.4980.1 vs. uniprot
Match: A0A6H5KIR2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIR2_9PHAE)

HSP 1 Score: 199 bits (506), Expect = 1.280e-62
Identity = 94/139 (67.63%), Postives = 115/139 (82.73%), Query Frame = 0

Query:    2 SSLDEYLDNPPDIKLWPESRQGCHGCGKRGRLYCSDCLVFVGTPTGVKTPTELRLPLQVDIVVTAKERKRSSGIHIAVAAPQSVRVVPFE-EADDGLPT--YQPGRDLVVFPSETSVCWSELSEGELSAARRIILVDCR 137
            S++++YL+ PPDI LWP++RQ CH CGKR RLYC DCL+ VG P GV+TPTELRLPLQVD+VVTA+ER+RSSG+H+AV APQSVRVV FE   D+GL +  Y+P  D VVFPS +SVCWSELSE +L+ ARRIIL+D R
Sbjct:    9 SAMEDYLERPPDINLWPKARQECHRCGKRVRLYCPDCLLLVGMPDGVETPTELRLPLQVDVVVTAEERRRSSGVHVAVMAPQSVRVVSFEGSGDNGLSSCSYRPESDFVVFPSASSVCWSELSEEDLARARRIILIDSR 147

[Close]

BLAST of mRNA_L-elsbetiae_contig1764.4980.1 vs. uniprot
Match: Q54C26_DICDI (tRNA-uridine aminocarboxypropyltransferase n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q54C26_DICDI)

HSP 1 Score: 89.0 bits (219), Expect = 6.030e-18
Identity = 54/196 (27.55%), Postives = 96/196 (48.98%), Query Frame = 0

Query:    1 MSSLDEYLDNPPDIKLWPE-------------SRQGCHGCGKRGRLYCSDCLVFVGTPTGVKTPTELRLPLQVDIVVTAKER-KRSSGIHIAVAAPQSVRVVPFEEADDGLPTYQPGRDLVVFPSETSVCWSELSEGELSAARRIILVDCRWVQTGTVMGHPRLRGLRHVRIDNPPTVSRFWRWHIEGEGHICTAE 182
            + S    LDN  D + W               SR  C  C K+ + +C DC + +G P   +   +L+LPL VD++    E   +S+ IH  V A + V+ + F E    +P Y     ++++PSE S    ++   + S  ++++ V+ +W     ++ HP+L+G++ V+ID   T+  FWR    G+ ++ T E
Sbjct:   66 LKSTVGVLDNVKDDQSWLSDLKLHTFDHMIDISRTICTKCEKKRKYFCYDCCLPLGDP---ENSPKLKLPLNVDVIHHPTELISKSTAIHSKVIAYEDVKFIEFPEE---IPDYNLDETILLYPSEDSCFVKDI---DFSNIKKVLFVESQWHNARKILKHPKLQGIKCVKIDMQKTM--FWRHQRHGDSYLATIE 250

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig1764.4980.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig1764.4980.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
D8LC29_ECTSI	1.080e-92	69.57	tRNA-uridine aminocarboxypropyltransferase n=1 Tax...	[more]
A0A6H5KIR2_9PHAE	1.280e-62	67.63	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
Q54C26_DICDI	6.030e-18	27.55	tRNA-uridine aminocarboxypropyltransferase n=1 Tax...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005636	DTW	SMART	SM01144	DTW_2a	coord: 31..182 e-value: 0.0047 score: -6.6
IPR005636	DTW	PFAM	PF03942	DTW	coord: 34..182 e-value: 4.2E-10 score: 39.7
None	No IPR available	PANTHER	PTHR15627:SF8	DTW DOMAIN-CONTAINING PROTEIN 1	coord: 19..182
None	No IPR available	PANTHER	PTHR15627	NATURAL KILLER CELL-SPECIFIC ANTIGEN KLIP1	coord: 19..182

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig1764	contig	L-elsbetiae_contig1764:310..7722 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig1764.4980.1	mRNA_L-elsbetiae_contig1764.4980.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig1764 310..7722 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig1764.4980.1 ID=prot_L-elsbetiae_contig1764.4980.1|Name=mRNA_L-elsbetiae_contig1764.4980.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=182bp
MSSLDEYLDNPPDIKLWPESRQGCHGCGKRGRLYCSDCLVFVGTPTGVKT
PTELRLPLQVDIVVTAKERKRSSGIHIAVAAPQSVRVVPFEEADDGLPTY
QPGRDLVVFPSETSVCWSELSEGELSAARRIILVDCRWVQTGTVMGHPRL
RGLRHVRIDNPPTVSRFWRWHIEGEGHICTAE

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR005636	DTW