prot_L-elsbetiae_contig1764.4980.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1764.4980.1
Unique Nameprot_L-elsbetiae_contig1764.4980.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length182
Homology
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BLAST of mRNA_L-elsbetiae_contig1764.4980.1 vs. uniprot
Match: D8LC29_ECTSI (tRNA-uridine aminocarboxypropyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC29_ECTSI)

HSP 1 Score: 282 bits (722), Expect = 1.080e-92
Identity = 128/184 (69.57%), Postives = 150/184 (81.52%), Query Frame = 0 
Query:    2 SSLDEYLDNPPDIKLWPESRQGCHGCGKRGRLYCSDCLVFVGTPTGVKTPTELRLPLQVDIVVTAKERKRSSGIHIAVAAPQSVRVVPFE-EADDGLPT--YQPGRDLVVFPSETSVCWSELSEGELSAARRIILVDCRWVQTGTVMGHPRLRGLRHVRIDNPPTVSRFWRWHIEGEGHICTAE 182
            S+++EYL+ PPDI LWP+ RQ CH CGKR RLYC DCL+ VGTP GV+TPTELRLPLQVD+VVTA+ER+RSSG+H+AV APQSVRVV FE    D L +  Y+P  D VVFPS  SVCWSELSE +L+  RR+IL+D RWV TG V+GHP+L+GLRHVRI  PP VS+FWRWH EGEGHICTAE
Sbjct:    9 SAMEEYLERPPDINLWPQGRQECHRCGKRVRLYCPDCLILVGTPDGVETPTELRLPLQVDVVVTAEERRRSSGVHVAVMAPQSVRVVSFEGSGGDDLSSCSYRPESDFVVFPSAASVCWSELSEEDLARVRRVILIDSRWVNTGAVVGHPKLKGLRHVRIREPPAVSQFWRWHTEGEGHICTAE 192
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BLAST of mRNA_L-elsbetiae_contig1764.4980.1 vs. uniprot
Match: A0A6H5KIR2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIR2_9PHAE)

HSP 1 Score: 199 bits (506), Expect = 1.280e-62
Identity = 94/139 (67.63%), Postives = 115/139 (82.73%), Query Frame = 0 
Query:    2 SSLDEYLDNPPDIKLWPESRQGCHGCGKRGRLYCSDCLVFVGTPTGVKTPTELRLPLQVDIVVTAKERKRSSGIHIAVAAPQSVRVVPFE-EADDGLPT--YQPGRDLVVFPSETSVCWSELSEGELSAARRIILVDCR 137
            S++++YL+ PPDI LWP++RQ CH CGKR RLYC DCL+ VG P GV+TPTELRLPLQVD+VVTA+ER+RSSG+H+AV APQSVRVV FE   D+GL +  Y+P  D VVFPS +SVCWSELSE +L+ ARRIIL+D R
Sbjct:    9 SAMEDYLERPPDINLWPKARQECHRCGKRVRLYCPDCLLLVGMPDGVETPTELRLPLQVDVVVTAEERRRSSGVHVAVMAPQSVRVVSFEGSGDNGLSSCSYRPESDFVVFPSASSVCWSELSEEDLARARRIILIDSR 147
[Close]
BLAST of mRNA_L-elsbetiae_contig1764.4980.1 vs. uniprot
Match: Q54C26_DICDI (tRNA-uridine aminocarboxypropyltransferase n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q54C26_DICDI)

HSP 1 Score: 89.0 bits (219), Expect = 6.030e-18
Identity = 54/196 (27.55%), Postives = 96/196 (48.98%), Query Frame = 0 
Query:    1 MSSLDEYLDNPPDIKLWPE-------------SRQGCHGCGKRGRLYCSDCLVFVGTPTGVKTPTELRLPLQVDIVVTAKER-KRSSGIHIAVAAPQSVRVVPFEEADDGLPTYQPGRDLVVFPSETSVCWSELSEGELSAARRIILVDCRWVQTGTVMGHPRLRGLRHVRIDNPPTVSRFWRWHIEGEGHICTAE 182
            + S    LDN  D + W               SR  C  C K+ + +C DC + +G P   +   +L+LPL VD++    E   +S+ IH  V A + V+ + F E    +P Y     ++++PSE S    ++   + S  ++++ V+ +W     ++ HP+L+G++ V+ID   T+  FWR    G+ ++ T E
Sbjct:   66 LKSTVGVLDNVKDDQSWLSDLKLHTFDHMIDISRTICTKCEKKRKYFCYDCCLPLGDP---ENSPKLKLPLNVDVIHHPTELISKSTAIHSKVIAYEDVKFIEFPEE---IPDYNLDETILLYPSEDSCFVKDI---DFSNIKKVLFVESQWHNARKILKHPKLQGIKCVKIDMQKTM--FWRHQRHGDSYLATIE 250
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1764.4980.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LC29_ECTSI1.080e-9269.57tRNA-uridine aminocarboxypropyltransferase n=1 Tax... [more]
A0A6H5KIR2_9PHAE1.280e-6267.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
Q54C26_DICDI6.030e-1827.55tRNA-uridine aminocarboxypropyltransferase n=1 Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005636DTWSMARTSM01144DTW_2acoord: 31..182
e-value: 0.0047
score: -6.6
IPR005636DTWPFAMPF03942DTWcoord: 34..182
e-value: 4.2E-10
score: 39.7
NoneNo IPR availablePANTHERPTHR15627:SF8DTW DOMAIN-CONTAINING PROTEIN 1coord: 19..182
NoneNo IPR availablePANTHERPTHR15627NATURAL KILLER CELL-SPECIFIC ANTIGEN KLIP1coord: 19..182

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1764contigL-elsbetiae_contig1764:310..7722 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1764.4980.1mRNA_L-elsbetiae_contig1764.4980.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1764 310..7722 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1764.4980.1 ID=prot_L-elsbetiae_contig1764.4980.1|Name=mRNA_L-elsbetiae_contig1764.4980.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=182bp
MSSLDEYLDNPPDIKLWPESRQGCHGCGKRGRLYCSDCLVFVGTPTGVKT
PTELRLPLQVDIVVTAKERKRSSGIHIAVAAPQSVRVVPFEEADDGLPTY
QPGRDLVVFPSETSVCWSELSEGELSAARRIILVDCRWVQTGTVMGHPRL
RGLRHVRIDNPPTVSRFWRWHIEGEGHICTAE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005636DTW