prot_L-elsbetiae_contig16855.4604.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig16855.4604.1
Unique Nameprot_L-elsbetiae_contig16855.4604.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length178
Homology
BLAST of mRNA_L-elsbetiae_contig16855.4604.1 vs. uniprot
Match: A0A6H5KNU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU3_9PHAE)

HSP 1 Score: 64.3 bits (155), Expect = 7.430e-9
Identity = 59/171 (34.50%), Postives = 82/171 (47.95%), Query Frame = 0
Query:    2 AAQFGHTDVMEAIIGAEADVDAAFGDGSTALHFAASNGEVGAVDAXXXXXXXXXMKNDANHXPXXXXXGQEAFETMCALLRHGADPNAKYSLGDTVLHLICTSPKG--GFEAVVEELLRRGADNTILDWDGCTPAGNLDVAREFFGLHAEEEYA----RPEEIQRVRMMLQ 166
            AAQ G   V+ AI+    DV+    DG T+LH AA N  V A+D          +++D +  P          E   AL +HGA+  A+   G+T L +I     G  G  A+V+ LLR GAD T L+ DG T A       E  G H   EYA      ++++RVR +L+
Sbjct:  163 AAQKGDACVLRAILQHGVDVNRRT-DGYTSLHVAALNNRVAAIDVLVEAGAHVEVEDDDDCTPFLDACSNHCHEAALALFKHGANIEARDMRGETPL-IIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAA-------EVVGHHI--EYAACPLNKQDLERVRDLLE 322          
BLAST of mRNA_L-elsbetiae_contig16855.4604.1 vs. uniprot
Match: D7G6X8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6X8_ECTSI)

HSP 1 Score: 62.0 bits (149), Expect = 4.550e-8
Identity = 58/172 (33.72%), Postives = 83/172 (48.26%), Query Frame = 0
Query:    1 MAAQFGHTDVMEAIIGAEADVDAAFGDGSTALHFAASNGEVGAVDAXXXXXXXXXMKNDANHXPXXXXXGQEAFETMCALLRHGADPNAKYSLGDTVLHLICTSPKG--GFEAVVEELLRRGADNTILDWDGCTPAGNLDVAREFFGLHAEEEYA----RPEEIQRVRMMLQ 166
            +AAQ G   V+ AI+    DV+    DG T+LH AA N  V A+D          +++D +  P          E   AL +HG++  A+   G+T L +I     G  G  A+V+ LLR GAD T L+ DG T A       E  G H   EYA      ++++RVR +L+
Sbjct:  113 LAAQKGDACVLRAILQHGVDVNRRT-DGYTSLHVAALNNRVAAIDVLVEAGAHVEVEDDDDCTPFLDACINHCHEAALALYKHGSNIEARDIRGETPL-IIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAA-------EVVGHHI--EYAACPLNKQDVERVRDLLE 273          
BLAST of mRNA_L-elsbetiae_contig16855.4604.1 vs. uniprot
Match: A0A150FX79_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150FX79_GONPE)

HSP 1 Score: 53.9 bits (128), Expect = 1.610e-5
Identity = 34/67 (50.75%), Postives = 39/67 (58.21%), Query Frame = 0
Query:   75 ETMCALLRHGADPNAKYSLGDTVLHLICTSPKGGFEAVVEELLRRGADNTILDWDGCTPAGNLDVAR 141
            E +  LL  GAD  A    G T LH  C   +GG   VV ELLR GAD+T++ WDG TP   LDVAR
Sbjct:   12 EVVTVLLTAGADVKAA-DKGFTPLHSAC---EGGHRDVVRELLRAGADHTLVSWDGRTP---LDVAR 71          
BLAST of mRNA_L-elsbetiae_contig16855.4604.1 vs. uniprot
Match: D8LP53_ECTSI (EsV-1-21 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP53_ECTSI)

HSP 1 Score: 53.1 bits (126), Expect = 5.110e-5
Identity = 49/152 (32.24%), Postives = 68/152 (44.74%), Query Frame = 0
Query:    2 AAQFGHTDVMEAIIGAEADVDAAFGDGSTALHFAASNGEVGAVDAXXXXXXXXXMKNDANHXPXXXXXGQEAFETMCALL--RHGADPNAK-YSLGDTVLHLICTSPKGGFEAVVEELLRRGADNTILDWDGCTPAGNLDVAREFFGLHAEE 150
            AA  GH DV+  ++     +DA  G+  T L  + S   +  V A            D             +     ALL  R+GAD N + Y  G +VLH  CT+ +   EA+V+ LLR GAD T++D  G TP  +L   R  F  H+ E
Sbjct:  244 AAFGGHNDVVNFLLENSVRIDAVDGNMMTPLICSVSENHL-CVSATLLEAGAAASAEDQTGTSSLSYAAASSSSVDMALLLLRYGADVNTRCYLFGSSVLHNACTN-RDNTEALVDLLLRWGADETVVDSSGRTPMNHLTEDR--FTRHSAE 391          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16855.4604.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KNU3_9PHAE7.430e-934.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G6X8_ECTSI4.550e-833.72Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
A0A150FX79_GONPE1.610e-550.75Uncharacterized protein n=1 Tax=Gonium pectorale T... [more]
D8LP53_ECTSI5.110e-532.24EsV-1-21 n=1 Tax=Ectocarpus siliculosus TaxID=2880... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 76..90
score: 40.04
coord: 28..43
score: 41.89
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 27..56
e-value: 0.0017
score: 27.6
coord: 60..89
e-value: 3.9
score: 16.4
coord: 93..125
e-value: 5.8
score: 15.9
IPR002110Ankyrin repeatPFAMPF00023Ankcoord: 94..127
e-value: 0.0045
score: 17.4
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 27..59
score: 13.464
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 2..90
e-value: 7.5E-14
score: 52.1
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..133
score: 32.864
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..169
e-value: 1.9E-34
score: 120.7
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 1..133
NoneNo IPR availablePANTHERPTHR24193:SF116ADA2A-CONTAINING COMPLEX COMPONENT 3, ISOFORM Dcoord: 1..71
coord: 27..135
NoneNo IPR availablePANTHERPTHR24193ANKYRIN REPEAT PROTEINcoord: 1..71
coord: 27..135

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig16855contigL-elsbetiae_contig16855:263..796 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig16855.4604.1mRNA_L-elsbetiae_contig16855.4604.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig16855 138..2147 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig16855.4604.1 ID=prot_L-elsbetiae_contig16855.4604.1|Name=mRNA_L-elsbetiae_contig16855.4604.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=178bp
MAAQFGHTDVMEAIIGAEADVDAAFGDGSTALHFAASNGEVGAVDALIKA
GANTEMKNDANHTPLLAAAGQEAFETMCALLRHGADPNAKYSLGDTVLHL
ICTSPKGGFEAVVEELLRRGADNTILDWDGCTPAGNLDVAREFFGLHAEE
EYARPEEIQRVRMMLQKRAPGGKKRKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf