prot_L-elsbetiae_contig16701.4532.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig16701.4532.1
Unique Nameprot_L-elsbetiae_contig16701.4532.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length65
Homology
BLAST of mRNA_L-elsbetiae_contig16701.4532.1 vs. uniprot
Match: A0A6H5JXM3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXM3_9PHAE)

HSP 1 Score: 76.3 bits (186), Expect = 1.130e-14
Identity = 34/60 (56.67%), Postives = 45/60 (75.00%), Query Frame = 0
Query:    1 MSKTERERASSKCMQELAIPGFIKLVEAYEAQKERTLPMPHKWKDMVYHTTLGTGTARPR 60
            MS  +R  A+SKCMQE+A+PGFIKL+E   +  E    MPHKWK MVY+TTLG+GT++ +
Sbjct:  168 MSAAQRNLAASKCMQEIAVPGFIKLIEHALSTMEGPPQMPHKWKVMVYYTTLGSGTSKAK 227          
BLAST of mRNA_L-elsbetiae_contig16701.4532.1 vs. uniprot
Match: A0A6H5KFH5_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFH5_9PHAE)

HSP 1 Score: 70.1 bits (170), Expect = 9.680e-14
Identity = 32/55 (58.18%), Postives = 41/55 (74.55%), Query Frame = 0
Query:    1 MSKTERERASSKCMQELAIPGFIKLVEAYEAQKERTLPMPHKWKDMVYHTTLGTG 55
            MS  +R  A+SKCMQE+A+PGFIKL+E   +     L MPHKWK MVY+T+LG+G
Sbjct:   64 MSAAQRNLAASKCMQEIAVPGFIKLIEHALSIMGGPLQMPHKWKVMVYYTSLGSG 118          
BLAST of mRNA_L-elsbetiae_contig16701.4532.1 vs. uniprot
Match: A0A6H5KGQ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGQ6_9PHAE)

HSP 1 Score: 58.5 bits (140), Expect = 3.980e-9
Identity = 25/41 (60.98%), Postives = 32/41 (78.05%), Query Frame = 0
Query:   14 MQELAIPGFIKLVEAYEAQKERTLPMPHKWKDMVYHTTLGT 54
            MQE+A+ GFIKL+E   +  +  L MPHKWKDMVY+TTLG+
Sbjct:    1 MQEIAVSGFIKLIEHAMSTMDGPLQMPHKWKDMVYYTTLGS 41          
BLAST of mRNA_L-elsbetiae_contig16701.4532.1 vs. uniprot
Match: D7FV02_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV02_ECTSI)

HSP 1 Score: 60.1 bits (144), Expect = 5.610e-9
Identity = 28/55 (50.91%), Postives = 35/55 (63.64%), Query Frame = 0
Query:    1 MSKTERERASSKCMQELAIPGFIKLVEAYEAQKERTLPMPHKWKDMVYHTTLGTG 55
            M    R  A SK MQE+A+PG+IK+ EA     +  L  PH WKD +Y+TTLGTG
Sbjct:   64 MKSDVRNAAMSKRMQEIAVPGWIKVCEAAIKDSQGELVFPHGWKDALYYTTLGTG 118          
BLAST of mRNA_L-elsbetiae_contig16701.4532.1 vs. uniprot
Match: A0A6H5KC17_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC17_9PHAE)

HSP 1 Score: 46.6 bits (109), Expect = 2.370e-5
Identity = 17/24 (70.83%), Postives = 22/24 (91.67%), Query Frame = 0
Query:   37 LPMPHKWKDMVYHTTLGTGTARPR 60
            L MPHKWKDMVY+TTLG+GT++ +
Sbjct:    5 LQMPHKWKDMVYYTTLGSGTSKAK 28          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16701.4532.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5JXM3_9PHAE1.130e-1456.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KFH5_9PHAE9.680e-1458.18Uncharacterized protein n=4 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KGQ6_9PHAE3.980e-960.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FV02_ECTSI5.610e-950.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KC17_9PHAE2.370e-570.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig16701contigL-elsbetiae_contig16701:2243..3005 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig16701.4532.1mRNA_L-elsbetiae_contig16701.4532.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig16701 2204..3027 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig16701.4532.1 ID=prot_L-elsbetiae_contig16701.4532.1|Name=mRNA_L-elsbetiae_contig16701.4532.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=65bp
MSKTERERASSKCMQELAIPGFIKLVEAYEAQKERTLPMPHKWKDMVYHT
TLGTGTARPRFRRI*
back to top