prot_L-elsbetiae_contig1667.4499.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1667.4499.1
Unique Nameprot_L-elsbetiae_contig1667.4499.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length174
Homology
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BLAST of mRNA_L-elsbetiae_contig1667.4499.1 vs. uniprot
Match: D7G4W5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4W5_ECTSI)

HSP 1 Score: 66.6 bits (161), Expect = 1.210e-9
Identity = 56/103 (54.37%), Postives = 66/103 (64.08%), Query Frame = 0 
Query:   41 RAPSSQKMLSVSEALVVRLAGSGFSTPASTAXXXXXXXXXXXXXXRSWGGSGVRRAGPRLDSCHERETVTVRGFLREVGFRVLADGGGDGGRRDMAASAVSIA 143
            R P   ++LSVSEAL+V+LA +G        XXXXXXXXXXXXXX           GP+L S HERE++ VRG LR+VGFR +ADGGGDG RR  A  A   A
Sbjct:  738 RRPLVPRILSVSEALIVQLAAAGAXXXXXXXXXXXXXXXXXXXXXXP--------GGPKLASGHERESMVVRGLLRDVGFRTVADGGGDGRRRQKALPAAVTA 832
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BLAST of mRNA_L-elsbetiae_contig1667.4499.1 vs. uniprot
Match: A0A6H5KTW3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTW3_9PHAE)

HSP 1 Score: 56.6 bits (135), Expect = 3.730e-6
Identity = 50/103 (48.54%), Postives = 61/103 (59.22%), Query Frame = 0 
Query:   41 RAPSSQKMLSVSEALVVRLAGSGFSTPASTAXXXXXXXXXXXXXXRSWGGSGVRRAGPRLDSCHERETVTVRGFLREVGFRVLADGGGDGGRRDMAASAVSIA 143
            R P + ++LSVSEAL+++LA           XXXXXXXXXXXXX             P+L S HERE++ VRG LR VGFR +ADGGG+G RR     A   A
Sbjct: 1932 RRPLAPRILSVSEALIIQLAAXXXXXXXXXXXXXXXXXXXXXXX--------XXXXXPKLASGHERESMVVRGLLRYVGFRTVADGGGNGRRRQKVLPAAVTA 2026
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1667.4499.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G4W5_ECTSI1.210e-954.37Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KTW3_9PHAE3.730e-648.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1667contigL-elsbetiae_contig1667:22511..23516 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1667.4499.1mRNA_L-elsbetiae_contig1667.4499.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1667 22511..23516 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1667.4499.1 ID=prot_L-elsbetiae_contig1667.4499.1|Name=mRNA_L-elsbetiae_contig1667.4499.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=174bp
PGSAAVEGAEGATSTSTTALLTKPCRQQERQQQQQERGQRRAPSSQKMLS
VSEALVVRLAGSGFSTPASTATASSGGGGKGKGKGRSWGGSGVRRAGPRL
DSCHERETVTVRGFLREVGFRVLADGGGDGGRRDMAASAVSIAEGEGKGK
GNNGPSAVRRGSGVGVGRAVLSTA
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