prot_L-elsbetiae_contig16654.4488.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig16654.4488.1
Unique Nameprot_L-elsbetiae_contig16654.4488.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length115
Homology
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BLAST of mRNA_L-elsbetiae_contig16654.4488.1 vs. uniprot
Match: A0A6H5L351_9PHAE (DNMT1-RFD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L351_9PHAE)

HSP 1 Score: 189 bits (480), Expect = 1.920e-53
Identity = 91/98 (92.86%), Postives = 94/98 (95.92%), Query Frame = 0 
Query:    1 EKARAKRPLDLGTILRRAENGWYDLEPGAEPPVASNSFGAGHAGVAYDVELMQQGWLEARGADSAIFGQARGVVDEFLALYETHVLNPLIELDKDIKG 98
            EKA  KRPLDLGTILRRAENGWYDLEPGAEPPV SNSFGAGHAGVAYDVELMQQGWLEA+GADSAIF QARGVVDEFLALYETHVLNPL+ELDKDI+G
Sbjct: 1323 EKAEVKRPLDLGTILRRAENGWYDLEPGAEPPVESNSFGAGHAGVAYDVELMQQGWLEAKGADSAIFEQARGVVDEFLALYETHVLNPLVELDKDIRG 1420
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BLAST of mRNA_L-elsbetiae_contig16654.4488.1 vs. uniprot
Match: D7G6R7_ECTSI (Bromo domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6R7_ECTSI)

HSP 1 Score: 188 bits (477), Expect = 4.900e-53
Identity = 94/118 (79.66%), Postives = 100/118 (84.75%), Query Frame = 0 
Query:    2 KARAKRPLDLGTILRRAENGWYDLEPGAEPPVASNSFGAGHAGVAYDVELMQQGWLEARGADSAIFGQARGVVDEFLALYETHVLNPLIELDKDIKGEGK--------GEGGVQGARL 111
            KA  KRPLDLGTILRRAENGWYDLEPGAEPPV SNSFGAGHAGVAYDVELMQQGWLEA+GADSAIF QARGVVDEFLALYETHVLNPL+ELDKDI+G           G GG++  R+
Sbjct:  863 KAEVKRPLDLGTILRRAENGWYDLEPGAEPPVESNSFGAGHAGVAYDVELMQQGWLEAKGADSAIFEQARGVVDEFLALYETHVLNPLVELDKDIRGSAAXXXXXXXXGRGGLEEGRV 980
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16654.4488.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L351_9PHAE1.920e-5392.86DNMT1-RFD domain-containing protein n=1 Tax=Ectoca... [more]
D7G6R7_ECTSI4.900e-5379.66Bromo domain-containing protein n=1 Tax=Ectocarpus... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig16654contigL-elsbetiae_contig16654:597..1716 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig16654.4488.1mRNA_L-elsbetiae_contig16654.4488.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig16654 597..1716 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig16654.4488.1 ID=prot_L-elsbetiae_contig16654.4488.1|Name=mRNA_L-elsbetiae_contig16654.4488.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=115bp
EKARAKRPLDLGTILRRAENGWYDLEPGAEPPVASNSFGAGHAGVAYDVE
LMQQGWLEARGADSAIFGQARGVVDEFLALYETHVLNPLIELDKDIKGEG
KGEGGVQGARLEKGG
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