prot_L-elsbetiae_contig163.4301.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig163.4301.1
Unique Nameprot_L-elsbetiae_contig163.4301.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length144
Homology
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BLAST of mRNA_L-elsbetiae_contig163.4301.1 vs. uniprot
Match: D8LJ78_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ78_ECTSI)

HSP 1 Score: 125 bits (315), Expect = 1.730e-31
Identity = 66/82 (80.49%), Postives = 75/82 (91.46%), Query Frame = 0 
Query:   45 NNLEEVEPAAKKAAQKLTNFRAYLHKSSVAGCFVDLLEMTNEGVMTEAGLYPSSRYKKSRSMRQAGVGGSGSRSRPPTGSRG 126
            +N E+V+PA KKAAQKLTNFR YLHKSSVAGCFVDLL+MT+EGVMTEAGLYPSSRYK+SR+MRQ+G+G S SRSRPPTG  G
Sbjct:    7 SNPEDVQPATKKAAQKLTNFRGYLHKSSVAGCFVDLLQMTDEGVMTEAGLYPSSRYKQSRNMRQSGLGTS-SRSRPPTGLNG 87
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BLAST of mRNA_L-elsbetiae_contig163.4301.1 vs. uniprot
Match: A0A6H5JK95_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK95_9PHAE)

HSP 1 Score: 77.8 bits (190), Expect = 6.460e-14
Identity = 51/92 (55.43%), Postives = 62/92 (67.39%), Query Frame = 0 
Query:   32 MRSIKALEASTNMNNLEEVEPAAKKAAQKLTNFRAYLHKSSVAGCFVDLLEMTNEGVMTEAGLYPSSRYKKSRSMRQAGVGGSG-SRSRPPT 122
            M+  +++EA    +N E+V+PA KKAAQKL NFR         GC       T  GVMTEAGLYPSSRYK+SR+MRQ+G+G S  SRSRPPT
Sbjct:    1 MKRFQSMEAGA-CSNPEDVQPATKKAAQKLANFR---------GC-----SSTASGVMTEAGLYPSSRYKQSRNMRQSGLGSSSRSRSRPPT 77
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig163.4301.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LJ78_ECTSI1.730e-3180.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JK95_9PHAE6.460e-1455.43Reverse transcriptase domain-containing protein n=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig163contigL-elsbetiae_contig163:2626..5661 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig163.4301.1mRNA_L-elsbetiae_contig163.4301.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig163 2625..5661 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig163.4301.1 ID=prot_L-elsbetiae_contig163.4301.1|Name=mRNA_L-elsbetiae_contig163.4301.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=144bp
TNYQLPGPVITSHTRRYNMPGAGSSPRVQRTMRSIKALEASTNMNNLEEV
EPAAKKAAQKLTNFRAYLHKSSVAGCFVDLLEMTNEGVMTEAGLYPSSRY
KKSRSMRQAGVGGSGSRSRPPTGSRGLPNHSNSHALGHSSPNQI
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