prot_L-elsbetiae_contig15670.3968.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig15670.3968.1
Unique Nameprot_L-elsbetiae_contig15670.3968.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length239
Homology
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BLAST of mRNA_L-elsbetiae_contig15670.3968.1 vs. uniprot
Match: A0A6H5JJQ2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JJQ2_9PHAE)

HSP 1 Score: 158 bits (399), Expect = 5.300e-41
Identity = 122/211 (57.82%), Postives = 140/211 (66.35%), Query Frame = 0 
Query:   11 RESVATFKRAIAAVGTSDPGMWVCYAAFLQGQLKACE--EXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAARLKEVLARAVVIHLSPSSAEDGGSLAMWKGLAPTTXXXXXXXIAARKERGGASLRATRGVSTSAGELEAAERRRTEDARGTLSAGLADICLALGEPEEAHVALRSVTRALARRPGRWLPRAALERRLAAVSGGDQGTA 219
            +ES+ TF+ A+ AVG S P MWV YA+FL+G+L+ACE  +                       XXXXXXXLAARL+EVLAR+V IHL+  +A +              XXXXXXXIAARKERGGASL ATRGVS  A  LEA  RRR ED+R  LSAGLAD+CLALGEPEEA  ALR+ T  L RRPG WL RAALERRLAA+ GGD G A
Sbjct:  246 QESLDTFELAVEAVGASQPDMWVRYASFLRGRLEACEGAKGRKRGGGAVDGGKGGEMVGASAPXXXXXXXLAARLREVLARSVEIHLAGGAAPNDPXX--------XXXXXXXXXIAARKERGGASLLATRGVSAPAEGLEAPSRRREEDSREALSAGLADVCLALGEPEEALAALRAATGVLPRRPGPWLRRAALERRLAAL-GGDPGQA 447
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15670.3968.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JJQ2_9PHAE5.300e-4157.82Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig15670contigL-elsbetiae_contig15670:2643..3359 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig15670.3968.1mRNA_L-elsbetiae_contig15670.3968.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig15670 2643..3360 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig15670.3968.1 ID=prot_L-elsbetiae_contig15670.3968.1|Name=mRNA_L-elsbetiae_contig15670.3968.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=239bp
GGAEGLGPAGRESVATFKRAIAAVGTSDPGMWVCYAAFLQGQLKACEEEE
ERKSGGGKKRKKSSSMVRSSAPAAAAASLAARLKEVLARAVVIHLSPSSA
EDGGSLAMWKGLAPTTTTVVTAAIAARKERGGASLRATRGVSTSAGELEA
AERRRTEDARGTLSAGLADICLALGEPEEAHVALRSVTRALARRPGRWLP
RAALERRLAAVSGGDQGTAVVAAGAAGNVAGGGASRLAS
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