prot_L-elsbetiae_contig1540.3817.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1540.3817.1
Unique Nameprot_L-elsbetiae_contig1540.3817.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length189
Homology
BLAST of mRNA_L-elsbetiae_contig1540.3817.1 vs. uniprot
Match: A0A6H5LJJ9_9PHAE (UmuC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJJ9_9PHAE)

HSP 1 Score: 290 bits (742), Expect = 6.120e-96
Identity = 152/180 (84.44%), Postives = 160/180 (88.89%), Query Frame = 0
Query:    6 AKPSTAMKGGWRQGPALSAGGGRGLGPALKEPLRVIAHIDMDAFYAQIEQLRDTALTGRPVVVVQYPTSKHDIEDMRPDDNRVVEDSASSIIAVSYEARPSGVKRGMKAADAQKLCPELSLVQVPTRNGKADISLYRHAGEKVVSVLERAGGETTAVEKASIDEVYVDITRAAQALLSSL 185
            AK S A    W  G A+SAGGGRGL PALKEPLRVIAHIDMDAFYAQIEQLRD ALTGRPVVVVQYPTS HDI+DM PDDNRVVE SASSIIAVSYEARP GVKRGMKA DA+K+CPEL+LVQVPTRNGKADISLYRHAGE+VV+VLERAGG  T VEKASIDEVYVD+TRAA ALLSSL
Sbjct:   11 AKISPAAGNAWTGGSAVSAGGGRGLAPALKEPLRVIAHIDMDAFYAQIEQLRDAALTGRPVVVVQYPTSNHDIKDMEPDDNRVVEGSASSIIAVSYEARPFGVKRGMKAGDARKVCPELALVQVPTRNGKADISLYRHAGERVVAVLERAGGALTTVEKASIDEVYVDVTRAAHALLSSL 190          
BLAST of mRNA_L-elsbetiae_contig1540.3817.1 vs. uniprot
Match: D7FT49_ECTSI (Translesion synthesis DNA polymerase eta splice variant n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT49_ECTSI)

HSP 1 Score: 291 bits (746), Expect = 8.520e-91
Identity = 159/199 (79.90%), Postives = 166/199 (83.42%), Query Frame = 0
Query:    1 MATPTAKPST-----AMKGGWRQGPALSAGGGRGLGPALKEPLRVIAHIDMDAFYAQIEQLRDTALTGRPVVVVQYPTSKHDIEDMRPDDNRVVEDSASSIIAVSYEARPSGVKRGMKAADAQKLCPELSLVQVPTRNGKADISLYRHAGEKVVSVLERAGGETTAVEKASIDEVYVDITRAAQALLSSL-----EGGG 189
            MAT   K ST     A   GW  G A+SAGGGRGL PALKEPLRVIAHIDMDAFYAQIEQLRD ALTGRPVVVVQYPTS HDI+DM PDDNRVVE SASSIIAVSYEARP GVKRGMKA DA+K+CPELSLVQVPTRNGKADIS YRHAGE+VV+VLERAGG  T VEKASIDEVYVD+TRAA ALLSSL     E GG
Sbjct:    1 MATSATKSSTSKIPPAAGSGWTGGSAVSAGGGRGLAPALKEPLRVIAHIDMDAFYAQIEQLRDAALTGRPVVVVQYPTSNHDIKDMAPDDNRVVEGSASSIIAVSYEARPFGVKRGMKAGDARKVCPELSLVQVPTRNGKADISFYRHAGERVVAVLERAGGALTTVEKASIDEVYVDVTRAAHALLSSLGSHNSESGG 199          
BLAST of mRNA_L-elsbetiae_contig1540.3817.1 vs. uniprot
Match: L1JQL2_GUITC (UmuC domain-containing protein (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JQL2_GUITC)

HSP 1 Score: 152 bits (383), Expect = 1.180e-41
Identity = 80/148 (54.05%), Postives = 107/148 (72.30%), Query Frame = 0
Query:   39 RVIAHIDMDAFYAQIEQLRDTALTGRPVVVVQYPTSKHDIEDMRPDDNRVVEDSASSIIAVSYEARPSGVKRGMKAADAQKLCPELSLVQVPTRNGKADISLYRHAGEKVVSVLERAGGETTAVEKASIDEVYVDITRAAQALLSSLE 186
            RV+AH+DMD FY Q+EQ RD +L G+PV V+QY     D++D+RPD+NR  + S  S+IAVSYEAR  GVKR M+  +A++ CP+L L+QVP  + K+DI+LYR AG +VV+VL R    ++A E+ASIDEVY DIT AA   L  +E
Sbjct:    3 RVVAHVDMDCFYVQVEQRRDESLRGKPVAVIQY-NPNGDLQDVRPDENRRCDHSDGSLIAVSYEARAKGVKRIMRGKEARQACPDLILIQVPVAHKKSDINLYREAGAEVVNVLARF---SSACERASIDEVYCDITDAALLQLDEIE 146          
BLAST of mRNA_L-elsbetiae_contig1540.3817.1 vs. uniprot
Match: A0A835Y9U0_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835Y9U0_9CHLO)

HSP 1 Score: 155 bits (391), Expect = 3.140e-40
Identity = 83/150 (55.33%), Postives = 109/150 (72.67%), Query Frame = 0
Query:   39 RVIAHIDMDAFYAQIEQLRDTALTGRPVVVVQY-PTSKHDIED-MRPDDNRVVEDSASSIIAVSYEARPSGVKRGMKAADAQKLCPELSLVQVPTRNGKADISLYRHAGEKVVSVLERAGGETTAVEKASIDEVYVDITRAAQALLSSLE 186
            RV+AHID+DAFYAQ+EQ R+ AL G+PV VVQY P     ++  +RP+DNR++ DS  SIIAVSYEAR  GVKR M    A+KLCP L LVQVPT +GKAD+++YR AG++V +VL R        E+ASIDE Y+D+T AA  +++ L+
Sbjct:   13 RVVAHIDLDAFYAQVEQRRNPALRGQPVAVVQYNPWDTEALKTALRPEDNRILNDSNGSIIAVSYEARKFGVKRNMMGQQARKLCPTLQLVQVPTAHGKADLTIYRQAGQQVAAVLARGA----LFERASIDEAYLDLTGAATRMVAQLD 158          
BLAST of mRNA_L-elsbetiae_contig1540.3817.1 vs. uniprot
Match: A0A1D2AE22_AUXPR (UmuC domain-containing protein (Fragment) n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D2AE22_AUXPR)

HSP 1 Score: 144 bits (364), Expect = 5.830e-40
Identity = 78/148 (52.70%), Postives = 106/148 (71.62%), Query Frame = 0
Query:   39 RVIAHIDMDAFYAQIEQLRD-TALTGRPVVVVQYPTSKHDIEDMRPDDNRVVEDSASSIIAVSYEARPSGVKRGMKAADAQKLCPELSLVQVPTRNGKADISLYRHAGEKVVSVLERAGGETTAVEKASIDEVYVDITRAAQALLSSL 185
            +VI H+D+DAFYAQ+E  RD   L G+P+ VVQY   + D+  + P+D+RV+  S +SIIAVSYEAR  GV+R M+  +A  LCP+L LVQVPT +GKAD++LYR AG +V+++L    G   A E+ASIDE Y+D+T AA A L+ L
Sbjct:   42 KVICHVDLDAFYAQVEAKRDPNRLAGKPLAVVQY-NPQGDLRTLLPEDDRVIPASPNSIIAVSYEARAQGVRRNMRGDEACALCPDLILVQVPTAHGKADLTLYRAAGRRVLALLAACAG---ACERASIDEAYLDLTEAAAARLAKL 185          
BLAST of mRNA_L-elsbetiae_contig1540.3817.1 vs. uniprot
Match: A0A7S1DMI3_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DMI3_HEMAN)

HSP 1 Score: 145 bits (366), Expect = 1.410e-39
Identity = 82/152 (53.95%), Postives = 105/152 (69.08%), Query Frame = 0
Query:   40 VIAHIDMDAFYAQIEQLRDTALTGRPVVVVQYPTSKHDIEDMRPDDNRVVEDSASSIIAVSYEARPSGVKRGMKAADAQKLCPELSLVQVPTRNGKADISLYRHAGEKVVSVLERAGGETTAVEKASIDEVYVDITRAAQALL---SSLEGG 188
            V+AHIDMDAFYAQ+E+  +  L   PV VVQY T   +I+DM P D+R  +  + +IIAVSYEAR SGVKR M A  A+ LCPEL+++QVP  N K+DI+LYR AG +VV+V+ R        E++SIDEVYVD++ AA  LL   S  EGG
Sbjct:    1 VVAHIDMDAFYAQVEKRLNPPLASSPVAVVQYNTYADNIKDMLPSDDRKTD--SGTIIAVSYEARSSGVKRNMNAKAAKALCPELTVIQVPVTNKKSDINLYREAGAEVVTVISR----NYTCERSSIDEVYVDVSEAAHTLLRDVSEQEGG 146          
BLAST of mRNA_L-elsbetiae_contig1540.3817.1 vs. uniprot
Match: A0A835T5S5_CHLIN (Uncharacterized protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835T5S5_CHLIN)

HSP 1 Score: 153 bits (386), Expect = 1.520e-39
Identity = 83/150 (55.33%), Postives = 106/150 (70.67%), Query Frame = 0
Query:   39 RVIAHIDMDAFYAQIEQLRDTALTGRPVVVVQY-PTSKHDIED-MRPDDNRVVEDSASSIIAVSYEARPSGVKRGMKAADAQKLCPELSLVQVPTRNGKADISLYRHAGEKVVSVLERAGGETTAVEKASIDEVYVDITRAAQALLSSLE 186
            RV+AHID+DAFYAQ+E  R+ AL G+PV VVQY P     ++  +RPDD R+  DS  SIIAVSYEAR  GVKR M   +A+K CP L LVQVPT +GKAD+++YR AG +V  VL    G    +E+ASIDE Y+D+T AAQ LL++ +
Sbjct:   29 RVVAHIDLDAFYAQVEVGRNPALRGQPVAVVQYNPWDTEALKTALRPDDPRIFNDSNGSIIAVSYEARRYGVKRNMSGQEARKACPALQLVQVPTAHGKADLTIYRQAGARVAEVLLGRCGGGAVLERASIDEAYLDLTEAAQRLLAAAD 178          
BLAST of mRNA_L-elsbetiae_contig1540.3817.1 vs. uniprot
Match: A0A2K3D4A8_CHLRE (Uncharacterized protein n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3D4A8_CHLRE)

HSP 1 Score: 152 bits (385), Expect = 2.070e-39
Identity = 82/150 (54.67%), Postives = 106/150 (70.67%), Query Frame = 0
Query:   39 RVIAHIDMDAFYAQIEQLRDTALTGRPVVVVQY-PTSKHDIED-MRPDDNRVVEDSASSIIAVSYEARPSGVKRGMKAADAQKLCPELSLVQVPTRNGKADISLYRHAGEKVVSVLERAGGETTAVEKASIDEVYVDITRAAQALLSSLE 186
            +V+AHID+DAFYAQ+E  R+ +L GRPV VVQY P     ++  +RPDD R+  DS  SIIAVSYEAR  GVKR M   +A+K CP L LVQVPT +GKAD+++YR AG +V  VL    G    +E+ASIDE Y+D+T AAQ LL++ +
Sbjct:   17 KVVAHIDLDAFYAQVEVGRNPSLRGRPVAVVQYNPWDTEALKTALRPDDPRIFNDSNGSIIAVSYEARKFGVKRNMSGQEARKACPTLQLVQVPTAHGKADLTIYRQAGARVAEVLLGRCGGGAVLERASIDEAYLDLTEAAQRLLAAAD 166          
BLAST of mRNA_L-elsbetiae_contig1540.3817.1 vs. uniprot
Match: A0A5J4XRP8_9CHLO (DNA polymerase eta n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XRP8_9CHLO)

HSP 1 Score: 147 bits (371), Expect = 9.870e-39
Identity = 78/149 (52.35%), Postives = 104/149 (69.80%), Query Frame = 0
Query:   39 RVIAHIDMDAFYAQIEQLRDTALTGRPVVVVQYPTSKHDIEDMRPDDNRVVEDSASSIIAVSYEARPSGVKRGMKAADAQKLCPELSLVQVPTRNGKADISLYRHAGEKVVSVLERAGGETTAVEKASIDEVYVDITRAAQALLSSLEG 187
            RVIAH+D+DAFY Q+E  R+  L G+PVV VQY     D+  + PD+ R+  DS  S+IAVSYEAR SGVKRGM+   A+K+CPE+ LVQVPT +GKAD+++YR AG++VV +L R        E+ASIDE Y+D+T  A   L++  G
Sbjct:    8 RVIAHVDLDAFYTQVEVQRNPDLKGKPVVTVQY-NPFGDLRTITPDEPRIFNDSNGSLIAVSYEARASGVKRGMRGDQARKVCPEVQLVQVPTAHGKADLTVYRDAGKQVVEILSRMA----ICERASIDECYLDLTEEAHKRLAASGG 151          
BLAST of mRNA_L-elsbetiae_contig1540.3817.1 vs. uniprot
Match: A0A383VYK4_TETOB (UmuC domain-containing protein n=2 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VYK4_TETOB)

HSP 1 Score: 150 bits (379), Expect = 1.230e-38
Identity = 80/144 (55.56%), Postives = 101/144 (70.14%), Query Frame = 0
Query:   38 LRVIAHIDMDAFYAQIEQLRDTALTGRPVVVVQYPTSKHDIEDMRPDDNRVVEDSASSIIAVSYEARPSGVKRGMKAADAQKLCPELSLVQVPTRNGKADISLYRHAGEKVVSVLERAGGETTAVEKASIDEVYVDITRAAQAL 181
            +RV+AH+D+DAFY Q+E  R+ +L G PVVVVQY     D+  ++P DNR+  DS  SIIAVSYEAR  GVKR M A  A+KLCPEL++VQVP  +GKADI +YR AG  V+SVL   G      E+AS+DE Y+D+T  AQ L
Sbjct:    1 MRVLAHVDLDAFYTQVEVQRNPSLKGTPVVVVQY-NPYGDLRTVKPSDNRLFPDSNGSIIAVSYEARKHGVKRNMMAQAAKKLCPELNIVQVPVAHGKADIQIYRDAGAAVISVLSSDGA---ICERASVDEAYLDVTAGAQQL 140          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1540.3817.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LJJ9_9PHAE6.120e-9684.44UmuC domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FT49_ECTSI8.520e-9179.90Translesion synthesis DNA polymerase eta splice va... [more]
L1JQL2_GUITC1.180e-4154.05UmuC domain-containing protein (Fragment) n=1 Tax=... [more]
A0A835Y9U0_9CHLO3.140e-4055.33Uncharacterized protein n=1 Tax=Edaphochlamys deba... [more]
A0A1D2AE22_AUXPR5.830e-4052.70UmuC domain-containing protein (Fragment) n=1 Tax=... [more]
A0A7S1DMI3_HEMAN1.410e-3953.95Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A835T5S5_CHLIN1.520e-3955.33Uncharacterized protein n=1 Tax=Chlamydomonas ince... [more]
A0A2K3D4A8_CHLRE2.070e-3954.67Uncharacterized protein n=1 Tax=Chlamydomonas rein... [more]
A0A5J4XRP8_9CHLO9.870e-3952.35DNA polymerase eta n=1 Tax=Trebouxia sp. A1-2 TaxI... [more]
A0A383VYK4_TETOB1.230e-3855.56UmuC domain-containing protein n=2 Tax=Tetradesmus... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.70.270coord: 137..186
e-value: 2.3E-28
score: 101.7
NoneNo IPR availableGENE3D2.30.40.20coord: 48..72
e-value: 9.0E-11
score: 44.1
coord: 93..136
e-value: 2.3E-28
score: 101.7
NoneNo IPR availablePANTHERPTHR45873FAMILY NOT NAMEDcoord: 13..184
NoneNo IPR availablePANTHERPTHR45873:SF1DNA POLYMERASE ETAcoord: 13..184
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 32..182
IPR001126UmuC domainPFAMPF00817IMScoord: 44..179
e-value: 8.2E-33
score: 113.5
IPR001126UmuC domainPROSITEPS50173UMUCcoord: 41..175
score: 27.096

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1540contigL-elsbetiae_contig1540:22920..24807 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1540.3817.1mRNA_L-elsbetiae_contig1540.3817.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1540 22832..24807 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1540.3817.1 ID=prot_L-elsbetiae_contig1540.3817.1|Name=mRNA_L-elsbetiae_contig1540.3817.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=189bp
MATPTAKPSTAMKGGWRQGPALSAGGGRGLGPALKEPLRVIAHIDMDAFY
AQIEQLRDTALTGRPVVVVQYPTSKHDIEDMRPDDNRVVEDSASSIIAVS
YEARPSGVKRGMKAADAQKLCPELSLVQVPTRNGKADISLYRHAGEKVVS
VLERAGGETTAVEKASIDEVYVDITRAAQALLSSLEGGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001126UmuC