mRNA_L-elsbetiae_contig1540.3817.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1540.3817.1 vs. uniprot
Match: A0A6H5LJJ9_9PHAE (UmuC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJJ9_9PHAE) HSP 1 Score: 291 bits (744), Expect = 9.490e-96 Identity = 152/180 (84.44%), Postives = 160/180 (88.89%), Query Frame = 2 Query: 104 AKPSTAMKGGWRQGPALSAGGGRGLGPALKEPLRVIAHIDMDAFYAQIEQLRDTALTGRPVVVVQYPTSKHDIEDMRPDDNRVVEDSASSIIAVSYEARPSGVKRGMKAADAQKLCPELSLVQVPTRNGKADISLYRHAGEKVVSVLERAGGETTAVEKASIDEVYVDITRAAQALLSSL 643 AK S A W G A+SAGGGRGL PALKEPLRVIAHIDMDAFYAQIEQLRD ALTGRPVVVVQYPTS HDI+DM PDDNRVVE SASSIIAVSYEARP GVKRGMKA DA+K+CPEL+LVQVPTRNGKADISLYRHAGE+VV+VLERAGG T VEKASIDEVYVD+TRAA ALLSSL Sbjct: 11 AKISPAAGNAWTGGSAVSAGGGRGLAPALKEPLRVIAHIDMDAFYAQIEQLRDAALTGRPVVVVQYPTSNHDIKDMEPDDNRVVEGSASSIIAVSYEARPFGVKRGMKAGDARKVCPELALVQVPTRNGKADISLYRHAGERVVAVLERAGGALTTVEKASIDEVYVDVTRAAHALLSSL 190
BLAST of mRNA_L-elsbetiae_contig1540.3817.1 vs. uniprot
Match: D7FT49_ECTSI (Translesion synthesis DNA polymerase eta splice variant n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT49_ECTSI) HSP 1 Score: 293 bits (750), Expect = 6.890e-91 Identity = 159/199 (79.90%), Postives = 166/199 (83.42%), Query Frame = 2 Query: 89 MATPTAKPST-----AMKGGWRQGPALSAGGGRGLGPALKEPLRVIAHIDMDAFYAQIEQLRDTALTGRPVVVVQYPTSKHDIEDMRPDDNRVVEDSASSIIAVSYEARPSGVKRGMKAADAQKLCPELSLVQVPTRNGKADISLYRHAGEKVVSVLERAGGETTAVEKASIDEVYVDITRAAQALLSSL-----EGGG 655 MAT K ST A GW G A+SAGGGRGL PALKEPLRVIAHIDMDAFYAQIEQLRD ALTGRPVVVVQYPTS HDI+DM PDDNRVVE SASSIIAVSYEARP GVKRGMKA DA+K+CPELSLVQVPTRNGKADIS YRHAGE+VV+VLERAGG T VEKASIDEVYVD+TRAA ALLSSL E GG Sbjct: 1 MATSATKSSTSKIPPAAGSGWTGGSAVSAGGGRGLAPALKEPLRVIAHIDMDAFYAQIEQLRDAALTGRPVVVVQYPTSNHDIKDMAPDDNRVVEGSASSIIAVSYEARPFGVKRGMKAGDARKVCPELSLVQVPTRNGKADISFYRHAGERVVAVLERAGGALTTVEKASIDEVYVDVTRAAHALLSSLGSHNSESGG 199
BLAST of mRNA_L-elsbetiae_contig1540.3817.1 vs. uniprot
Match: L1JQL2_GUITC (UmuC domain-containing protein (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JQL2_GUITC) HSP 1 Score: 152 bits (383), Expect = 3.180e-41 Identity = 80/148 (54.05%), Postives = 107/148 (72.30%), Query Frame = 2 Query: 203 RVIAHIDMDAFYAQIEQLRDTALTGRPVVVVQYPTSKHDIEDMRPDDNRVVEDSASSIIAVSYEARPSGVKRGMKAADAQKLCPELSLVQVPTRNGKADISLYRHAGEKVVSVLERAGGETTAVEKASIDEVYVDITRAAQALLSSLE 646 RV+AH+DMD FY Q+EQ RD +L G+PV V+QY D++D+RPD+NR + S S+IAVSYEAR GVKR M+ +A++ CP+L L+QVP + K+DI+LYR AG +VV+VL R ++A E+ASIDEVY DIT AA L +E Sbjct: 3 RVVAHVDMDCFYVQVEQRRDESLRGKPVAVIQY-NPNGDLQDVRPDENRRCDHSDGSLIAVSYEARAKGVKRIMRGKEARQACPDLILIQVPVAHKKSDINLYREAGAEVVNVLARF---SSACERASIDEVYCDITDAALLQLDEIE 146
BLAST of mRNA_L-elsbetiae_contig1540.3817.1 vs. uniprot
Match: A0A835Y9U0_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835Y9U0_9CHLO) HSP 1 Score: 155 bits (391), Expect = 8.680e-40 Identity = 83/150 (55.33%), Postives = 109/150 (72.67%), Query Frame = 2 Query: 203 RVIAHIDMDAFYAQIEQLRDTALTGRPVVVVQY-PTSKHDIED-MRPDDNRVVEDSASSIIAVSYEARPSGVKRGMKAADAQKLCPELSLVQVPTRNGKADISLYRHAGEKVVSVLERAGGETTAVEKASIDEVYVDITRAAQALLSSLE 646 RV+AHID+DAFYAQ+EQ R+ AL G+PV VVQY P ++ +RP+DNR++ DS SIIAVSYEAR GVKR M A+KLCP L LVQVPT +GKAD+++YR AG++V +VL R E+ASIDE Y+D+T AA +++ L+ Sbjct: 13 RVVAHIDLDAFYAQVEQRRNPALRGQPVAVVQYNPWDTEALKTALRPEDNRILNDSNGSIIAVSYEARKFGVKRNMMGQQARKLCPTLQLVQVPTAHGKADLTIYRQAGQQVAAVLARGA----LFERASIDEAYLDLTGAATRMVAQLD 158
BLAST of mRNA_L-elsbetiae_contig1540.3817.1 vs. uniprot
Match: A0A1D2AE22_AUXPR (UmuC domain-containing protein (Fragment) n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D2AE22_AUXPR) HSP 1 Score: 144 bits (364), Expect = 1.550e-39 Identity = 78/148 (52.70%), Postives = 106/148 (71.62%), Query Frame = 2 Query: 203 RVIAHIDMDAFYAQIEQLRD-TALTGRPVVVVQYPTSKHDIEDMRPDDNRVVEDSASSIIAVSYEARPSGVKRGMKAADAQKLCPELSLVQVPTRNGKADISLYRHAGEKVVSVLERAGGETTAVEKASIDEVYVDITRAAQALLSSL 643 +VI H+D+DAFYAQ+E RD L G+P+ VVQY + D+ + P+D+RV+ S +SIIAVSYEAR GV+R M+ +A LCP+L LVQVPT +GKAD++LYR AG +V+++L G A E+ASIDE Y+D+T AA A L+ L Sbjct: 42 KVICHVDLDAFYAQVEAKRDPNRLAGKPLAVVQY-NPQGDLRTLLPEDDRVIPASPNSIIAVSYEARAQGVRRNMRGDEACALCPDLILVQVPTAHGKADLTLYRAAGRRVLALLAACAG---ACERASIDEAYLDLTEAAAARLAKL 185
BLAST of mRNA_L-elsbetiae_contig1540.3817.1 vs. uniprot
Match: A0A7S1DMI3_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DMI3_HEMAN) HSP 1 Score: 145 bits (366), Expect = 3.740e-39 Identity = 82/152 (53.95%), Postives = 105/152 (69.08%), Query Frame = 2 Query: 206 VIAHIDMDAFYAQIEQLRDTALTGRPVVVVQYPTSKHDIEDMRPDDNRVVEDSASSIIAVSYEARPSGVKRGMKAADAQKLCPELSLVQVPTRNGKADISLYRHAGEKVVSVLERAGGETTAVEKASIDEVYVDITRAAQALL---SSLEGG 652 V+AHIDMDAFYAQ+E+ + L PV VVQY T +I+DM P D+R + + +IIAVSYEAR SGVKR M A A+ LCPEL+++QVP N K+DI+LYR AG +VV+V+ R E++SIDEVYVD++ AA LL S EGG Sbjct: 1 VVAHIDMDAFYAQVEKRLNPPLASSPVAVVQYNTYADNIKDMLPSDDRKTD--SGTIIAVSYEARSSGVKRNMNAKAAKALCPELTVIQVPVTNKKSDINLYREAGAEVVTVISR----NYTCERSSIDEVYVDVSEAAHTLLRDVSEQEGG 146
BLAST of mRNA_L-elsbetiae_contig1540.3817.1 vs. uniprot
Match: A0A835T5S5_CHLIN (Uncharacterized protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835T5S5_CHLIN) HSP 1 Score: 153 bits (386), Expect = 4.210e-39 Identity = 83/150 (55.33%), Postives = 106/150 (70.67%), Query Frame = 2 Query: 203 RVIAHIDMDAFYAQIEQLRDTALTGRPVVVVQY-PTSKHDIED-MRPDDNRVVEDSASSIIAVSYEARPSGVKRGMKAADAQKLCPELSLVQVPTRNGKADISLYRHAGEKVVSVLERAGGETTAVEKASIDEVYVDITRAAQALLSSLE 646 RV+AHID+DAFYAQ+E R+ AL G+PV VVQY P ++ +RPDD R+ DS SIIAVSYEAR GVKR M +A+K CP L LVQVPT +GKAD+++YR AG +V VL G +E+ASIDE Y+D+T AAQ LL++ + Sbjct: 29 RVVAHIDLDAFYAQVEVGRNPALRGQPVAVVQYNPWDTEALKTALRPDDPRIFNDSNGSIIAVSYEARRYGVKRNMSGQEARKACPALQLVQVPTAHGKADLTIYRQAGARVAEVLLGRCGGGAVLERASIDEAYLDLTEAAQRLLAAAD 178
BLAST of mRNA_L-elsbetiae_contig1540.3817.1 vs. uniprot
Match: A0A2K3D4A8_CHLRE (Uncharacterized protein n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3D4A8_CHLRE) HSP 1 Score: 152 bits (385), Expect = 5.740e-39 Identity = 82/150 (54.67%), Postives = 106/150 (70.67%), Query Frame = 2 Query: 203 RVIAHIDMDAFYAQIEQLRDTALTGRPVVVVQY-PTSKHDIED-MRPDDNRVVEDSASSIIAVSYEARPSGVKRGMKAADAQKLCPELSLVQVPTRNGKADISLYRHAGEKVVSVLERAGGETTAVEKASIDEVYVDITRAAQALLSSLE 646 +V+AHID+DAFYAQ+E R+ +L GRPV VVQY P ++ +RPDD R+ DS SIIAVSYEAR GVKR M +A+K CP L LVQVPT +GKAD+++YR AG +V VL G +E+ASIDE Y+D+T AAQ LL++ + Sbjct: 17 KVVAHIDLDAFYAQVEVGRNPSLRGRPVAVVQYNPWDTEALKTALRPDDPRIFNDSNGSIIAVSYEARKFGVKRNMSGQEARKACPTLQLVQVPTAHGKADLTIYRQAGARVAEVLLGRCGGGAVLERASIDEAYLDLTEAAQRLLAAAD 166
BLAST of mRNA_L-elsbetiae_contig1540.3817.1 vs. uniprot
Match: A0A5J4XRP8_9CHLO (DNA polymerase eta n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XRP8_9CHLO) HSP 1 Score: 147 bits (371), Expect = 2.640e-38 Identity = 78/149 (52.35%), Postives = 104/149 (69.80%), Query Frame = 2 Query: 203 RVIAHIDMDAFYAQIEQLRDTALTGRPVVVVQYPTSKHDIEDMRPDDNRVVEDSASSIIAVSYEARPSGVKRGMKAADAQKLCPELSLVQVPTRNGKADISLYRHAGEKVVSVLERAGGETTAVEKASIDEVYVDITRAAQALLSSLEG 649 RVIAH+D+DAFY Q+E R+ L G+PVV VQY D+ + PD+ R+ DS S+IAVSYEAR SGVKRGM+ A+K+CPE+ LVQVPT +GKAD+++YR AG++VV +L R E+ASIDE Y+D+T A L++ G Sbjct: 8 RVIAHVDLDAFYTQVEVQRNPDLKGKPVVTVQY-NPFGDLRTITPDEPRIFNDSNGSLIAVSYEARASGVKRGMRGDQARKVCPEVQLVQVPTAHGKADLTVYRDAGKQVVEILSRMA----ICERASIDECYLDLTEEAHKRLAASGG 151
BLAST of mRNA_L-elsbetiae_contig1540.3817.1 vs. uniprot
Match: A0A383VYK4_TETOB (UmuC domain-containing protein n=2 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VYK4_TETOB) HSP 1 Score: 150 bits (379), Expect = 3.350e-38 Identity = 80/144 (55.56%), Postives = 101/144 (70.14%), Query Frame = 2 Query: 200 LRVIAHIDMDAFYAQIEQLRDTALTGRPVVVVQYPTSKHDIEDMRPDDNRVVEDSASSIIAVSYEARPSGVKRGMKAADAQKLCPELSLVQVPTRNGKADISLYRHAGEKVVSVLERAGGETTAVEKASIDEVYVDITRAAQAL 631 +RV+AH+D+DAFY Q+E R+ +L G PVVVVQY D+ ++P DNR+ DS SIIAVSYEAR GVKR M A A+KLCPEL++VQVP +GKADI +YR AG V+SVL G E+AS+DE Y+D+T AQ L Sbjct: 1 MRVLAHVDLDAFYTQVEVQRNPSLKGTPVVVVQY-NPYGDLRTVKPSDNRLFPDSNGSIIAVSYEARKHGVKRNMMAQAAKKLCPELNIVQVPVAHGKADIQIYRDAGAAVISVLSSDGA---ICERASVDEAYLDVTAGAQQL 140 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1540.3817.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1540.3817.1 >prot_L-elsbetiae_contig1540.3817.1 ID=prot_L-elsbetiae_contig1540.3817.1|Name=mRNA_L-elsbetiae_contig1540.3817.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=189bp MATPTAKPSTAMKGGWRQGPALSAGGGRGLGPALKEPLRVIAHIDMDAFYback to top mRNA from alignment at L-elsbetiae_contig1540:22832..24807+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1540.3817.1 ID=mRNA_L-elsbetiae_contig1540.3817.1|Name=mRNA_L-elsbetiae_contig1540.3817.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1976bp|location=Sequence derived from alignment at L-elsbetiae_contig1540:22832..24807+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1540:22832..24807+ >mRNA_L-elsbetiae_contig1540.3817.1 ID=mRNA_L-elsbetiae_contig1540.3817.1|Name=mRNA_L-elsbetiae_contig1540.3817.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1134bp|location=Sequence derived from alignment at L-elsbetiae_contig1540:22832..24807+ (Laminarionema elsbetiae ELsaHSoW15)back to top |