prot_L-elsbetiae_contig1536.3796.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1536.3796.1
Unique Nameprot_L-elsbetiae_contig1536.3796.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length181
Homology
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BLAST of mRNA_L-elsbetiae_contig1536.3796.1 vs. uniprot
Match: D7FKG2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKG2_ECTSI)

HSP 1 Score: 157 bits (397), Expect = 1.190e-46
Identity = 81/96 (84.38%), Postives = 89/96 (92.71%), Query Frame = 0 
Query:   66 VPNEYEAFFNKASKLGADATRGLAPEERAQRAMEGEKLEDDIIEIATVLREKADEMVEKTGAINFEVIQPMIDEISVLKSKYKVLMGVSEEEPVDG 161
            +PNEYEAFFNKAS+LGADATR LAPEERAQRAMEGEKLED+IIEIATVLREKADEMV +TGAINFE+IQPMIDEI+VLKSKYKV+MG +E    DG
Sbjct:    1 MPNEYEAFFNKASRLGADATRDLAPEERAQRAMEGEKLEDEIIEIATVLREKADEMVAETGAINFEIIQPMIDEIAVLKSKYKVVMGATETADGDG 96
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1536.3796.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FKG2_ECTSI1.190e-4684.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..180
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..12
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..18
score: 0.636
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1536contigL-elsbetiae_contig1536:21748..24400 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1536.3796.1mRNA_L-elsbetiae_contig1536.3796.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1536 21039..24436 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1536.3796.1 ID=prot_L-elsbetiae_contig1536.3796.1|Name=mRNA_L-elsbetiae_contig1536.3796.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=181bp
MHLSTLIHVALLPGVVLAFSGGWNWFARSTRQHPQHTSAGVGSFRRFDHA
CSPAAAVASKQQLRLVPNEYEAFFNKASKLGADATRGLAPEERAQRAMEG
EKLEDDIIEIATVLREKADEMVEKTGAINFEVIQPMIDEISVLKSKYKVL
MGVSEEEPVDGGSNNSPAADDNEEDASSPP*
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