prot_L-elsbetiae_contig1527.3739.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1527.3739.1
Unique Nameprot_L-elsbetiae_contig1527.3739.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length244
Homology
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BLAST of mRNA_L-elsbetiae_contig1527.3739.1 vs. uniprot
Match: A0A6H5JZV9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZV9_9PHAE)

HSP 1 Score: 196 bits (497), Expect = 7.980e-59
Identity = 142/253 (56.13%), Postives = 154/253 (60.87%), Query Frame = 0 
Query:    1 MGKEPRCLGVKKLLPPNIXXXXXXXXXXXXXXXXFFFIGVGVSVYNKEMLDNNRLPLVNGFSQLVISKAEQRD-----------ESAAAAAARAESDGAEGGDASGHRLGHRHRQPPPAPHAVETPGVGVAAGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGPSNRDQMEALMAYAAGRVRKQVEITKQVAEELTKLTPGKLREATVVQANKVQEMPALLLDTSKRMVGSGTKVVRKYLDEQERK 242
            +G+EP+CLG K  LPPNI  XXXXXXXXXXXX  FFFIGVGVSVYNKEML NNRLPLVNGFSQLV+SK E+RD           E  AAAAAR             H  G+R  QP  A  A    G   AA                                       + R Q+EALM+YA GR+RKQVEIT QV +EL KLTPGKLREATVVQANKVQEMP LLLDTSKRMV SGTK VR YL+EQERK
Sbjct:   33 VGQEPQCLGFKTALPPNIIIXXXXXXXXXXXXAKFFFIGVGVSVYNKEMLSNNRLPLVNGFSQLVVSKEEERDKTDALHNGRIGEYEAAAAARH------------HGRGNRQPQPHTAAEASAQGGRQGAA----------------VPTTLSQRSGVAGDGVEERSSSTTGRKQVEALMSYAVGRIRKQVEITMQVTDELKKLTPGKLREATVVQANKVQEMPTLLLDTSKRMVDSGTKFVRNYLEEQERK 257
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BLAST of mRNA_L-elsbetiae_contig1527.3739.1 vs. uniprot
Match: D8LTV3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTV3_ECTSI)

HSP 1 Score: 157 bits (396), Expect = 1.560e-44
Identity = 105/204 (51.47%), Postives = 119/204 (58.33%), Query Frame = 0 
Query:   40 VGVSVYNKEMLDNNRLPLVNGFSQLVISKAEQRDESAAAAAARAESDGAEGGDASGHRLGHRHRQPPPAPHAV-ETPGVGVAAGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGPSNRDQMEALMAYAAGRVRKQVEITKQVAEELTKLTPGKLREATVVQANKVQEMPALLLDTSKRMVGSGTKVVRKYLDEQERK 242
            +GVSVYNKEML NNRLPLVNGFSQL++SK E++D++ A    R    G    D         H QP   PHA  E P  G   G                                      + R Q+EALMAYA GR+RKQV+IT QV +EL KLTP K+REATVVQANKVQEMP LLLDTSKRMV SGTK VR YL+EQERK
Sbjct:    1 MGVSVYNKEMLSNNRLPLVNGFSQLLVSKEEEKDKADARHNGRK---GEHEADXXXXXXXRGHLQP--QPHAAAEAPAQGGRQGAAVPTTLSQRSGVAGDGVEEGSSST-------------TGRKQVEALMAYAVGRIRKQVDITIQVTDELKKLTPEKVREATVVQANKVQEMPTLLLDTSKRMVDSGTKFVRNYLEEQERK 186
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1527.3739.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JZV9_9PHAE7.980e-5956.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LTV3_ECTSI1.560e-4451.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1527contigL-elsbetiae_contig1527:20365..22474 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1527.3739.1mRNA_L-elsbetiae_contig1527.3739.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1527 20357..23104 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1527.3739.1 ID=prot_L-elsbetiae_contig1527.3739.1|Name=mRNA_L-elsbetiae_contig1527.3739.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=244bp
MGKEPRCLGVKKLLPPNIVITEEDVVPPPPEDSKFFFIGVGVSVYNKEML
DNNRLPLVNGFSQLVISKAEQRDESAAAAAARAESDGAEGGDASGHRLGH
RHRQPPPAPHAVETPGVGVAAGRRQQQQQRPQQGSAVPATLSQRSGASTG
GGGGGEDGGPSNRDQMEALMAYAAGRVRKQVEITKQVAEELTKLTPGKLR
EATVVQANKVQEMPALLLDTSKRMVGSGTKVVRKYLDEQERKK*
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