prot_L-elsbetiae_contig1498.3569.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1498.3569.1
Unique Nameprot_L-elsbetiae_contig1498.3569.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length468
Homology
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BLAST of mRNA_L-elsbetiae_contig1498.3569.1 vs. uniprot
Match: D8LHR5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHR5_ECTSI)

HSP 1 Score: 275 bits (704), Expect = 9.040e-84
Identity = 240/510 (47.06%), Postives = 284/510 (55.69%), Query Frame = 0 
Query:    7 KLSAAEKKTIEFGLAVVILSACPSAGPSAAVEGCGK-------QRASKQLRLWQGSCLGGLAEAGS--RARPDLAE---TSHRQQQREAGPVGGRTDS----LRAAGAAEL-HVQGNQPGRCGVVPAGSFVSPAA-EPMRRLLASDGGSDLRALGAVALSGCQSESARAVQKEALEGLWHGDCSPEMVSLFAKQMLEQVVIRGQG-GGGQVYRHVLDLMVSITADVAAXXXXXXXXXXXXXXXXXXXXXXXXVAVSMLARRLDVGLAVSQALDAVLVQLARELRRGFGSGGAGRVVVTGTRSSRQHHSPSXXXXXXXXXXXXXXX------------------------GLYLDAYEAATACLLRAFNCLAQGDPERERRAXXXXXXXXXXSRNRGDSLRPNQPPGTESRGGNKRSSDES---FGVRNRGQGQGASIRQFGPTASERVAERGVLPR---GWRDASARRNAWTQRKLEVLAEATTTMSSFRMGQLRLQRIVARVYEWARSA 467
            +LSAAEKKTIEFGLAV IL++ P AG  ++    G        QRASKQLRLWQG+CLGGLA+ GS  R RP+       + R   R     GG  D+    + +   AEL H + +Q G    V +G   S AA EPM RLL S  GSDLRALGAVALSGC+S+ ARAV+KEALEG+WHGDCSP  VSLF ++MLEQVV+ GQ  G G  YRHVLDLMVSI  +VA                            + ++RR+DV LAVSQA D  LVQLAR LR      G G   +TGT+  + + +  XXXXXXXXXXXXXXX                        GL+LDAYE+  A L  AF+ L   +                      DSL PN  P      G++RSS +    F     GQ  G   R   PT +  V ER +      GW DA ARRNAWTQ KLEVLAEATT +SSF MGQLRLQR+V+RVYEWAR A
Sbjct:    8 QLSAAEKKTIEFGLAVAILTSGPWAGECSSKRSSGTSGDPSSDQRASKQLRLWQGACLGGLAQVGSGTRRRPEGKRPHPATTRDDDRGIALAGGSCDNTSHGIGSTFPAELSHARRSQRGGPFPVTSGGCGSAAAVEPMGRLLTSGTGSDLRALGAVALSGCRSDGARAVRKEALEGIWHGDCSPSTVSLFVREMLEQVVLCGQCVGSGHTYRHVLDLMVSIVEEVAETASVVAAANANANTGPSQPHDWSGNDAASISRRIDVALAVSQAFDTTLVQLARGLR------GGGICSITGTQGLQVNTTSGXXXXXXXXXXXXXXXXXXRAMVAQPQSREATALAQAGRAGLFLDAYESVVAGLGNAFSHLELAEHS---------FGDDDGGDGGVDSLPPNGSPT-----GDRRSSPDELLLFTHLTGGQHLGTPNR---PTTT--VPERNMPANHGLGW-DAEARRNAWTQTKLEVLAEATTLLSSFPMGQLRLQRVVSRVYEWARLA 491
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1498.3569.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LHR5_ECTSI9.040e-8447.06Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 18..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 29..36
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..36
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 37..467
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..28
score: 5.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1498contigL-elsbetiae_contig1498:8877..13311 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1498.3569.1mRNA_L-elsbetiae_contig1498.3569.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1498 8832..13477 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1498.3569.1 ID=prot_L-elsbetiae_contig1498.3569.1|Name=mRNA_L-elsbetiae_contig1498.3569.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=468bp
MDAAGQKLSAAEKKTIEFGLAVVILSACPSAGPSAAVEGCGKQRASKQLR
LWQGSCLGGLAEAGSRARPDLAETSHRQQQREAGPVGGRTDSLRAAGAAE
LHVQGNQPGRCGVVPAGSFVSPAAEPMRRLLASDGGSDLRALGAVALSGC
QSESARAVQKEALEGLWHGDCSPEMVSLFAKQMLEQVVIRGQGGGGQVYR
HVLDLMVSITADVAAAASSLASGDNNGGAVAGAPAAAAAVAVSMLARRLD
VGLAVSQALDAVLVQLARELRRGFGSGGAGRVVVTGTRSSRQHHSPSAAT
AAATATARAAGAGLYLDAYEAATACLLRAFNCLAQGDPERERRAPLPPPS
PSPSSRNRGDSLRPNQPPGTESRGGNKRSSDESFGVRNRGQGQGASIRQF
GPTASERVAERGVLPRGWRDASARRNAWTQRKLEVLAEATTTMSSFRMGQ
LRLQRIVARVYEWARSA*
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