prot_L-elsbetiae_contig14671.3403.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig14671.3403.1
Unique Nameprot_L-elsbetiae_contig14671.3403.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length119
Homology
BLAST of mRNA_L-elsbetiae_contig14671.3403.1 vs. uniprot
Match: D8LI27_ECTSI (Rieske domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI27_ECTSI)

HSP 1 Score: 193 bits (491), Expect = 8.350e-61
Identity = 90/108 (83.33%), Postives = 101/108 (93.52%), Query Frame = 0
Query:   12 EWVPVVPIKEAPSPGTAKSVFVSDLDLCVAADEQGLLYVLGNKCPPANQPLSFSLVVNNCIKDPVLGTKINIETGDVVEWCPSLLGKLLSPILGPEPENAGVNVFKVR 119
            +WVP++PI EAP+PGTAKSV+V+DLDLCVAADE+GLLYVLGNKCPPANQPLSFSLV NN IKDPVLGTKI+IETGDV+EWCP+LLGKLLSPILG +PENAGV  F VR
Sbjct:   49 QWVPILPIDEAPTPGTAKSVYVADLDLCVAADERGLLYVLGNKCPPANQPLSFSLVSNNIIKDPVLGTKIDIETGDVIEWCPNLLGKLLSPILGAQPENAGVQTFVVR 156          
BLAST of mRNA_L-elsbetiae_contig14671.3403.1 vs. uniprot
Match: A0A7S3P6K4_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P6K4_9STRA)

HSP 1 Score: 117 bits (293), Expect = 1.040e-30
Identity = 55/114 (48.25%), Postives = 74/114 (64.91%), Query Frame = 0
Query:    6 KSQSKFEWVPVVPIKEAPSPGTAKSVFVSDLDLCVAADEQGLLYVLGNKCPPANQPLSFSLVVNNCIKDPVLGTKINIETGDVVEWCPSLLGKLLSPILGPEPENAGVNVFKVR 119
            K +   ++VP +PI++ P PG+A S     L +C+A DE+G +Y LG+KCPP NQPLSF  V   CI DPVLG+K +++TG+VV WCPS LGKLL     P     GV  + V+
Sbjct:   54 KYKPALKYVPCIPIEQLPKPGSATSGEAGGLAICIAVDEKGAIYALGDKCPPVNQPLSFGKVEGGCISDPVLGSKFDLKTGEVVSWCPSGLGKLLGGAFSP----TGVVTYPVK 163          
BLAST of mRNA_L-elsbetiae_contig14671.3403.1 vs. uniprot
Match: A0A7S2VVZ0_9STRA (Hypothetical protein n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2VVZ0_9STRA)

HSP 1 Score: 114 bits (285), Expect = 1.060e-29
Identity = 56/119 (47.06%), Postives = 73/119 (61.34%), Query Frame = 0
Query:    2 MAGKKSQSKFEWVPVVPIKEAPSPGTAKSVFVSDLDLCVAADEQGLLYVLGNKCPPANQPLSFSLVVNNCIKDPVLGTKINIETGDVV-EWCPSLLGKLLSPILGPEPENAGVNVFKVR 119
            +  KK   K ++ P +P K  P PGTA S     L +C+A D+ G +Y LG+KCPP NQPLSF  V N CI+DPVLGTK N++ G V   WCPS +GKLL  +  P    +GV  + V+
Sbjct:   32 LQAKKIGPKLQYAPCIPTKNIPKPGTATSGVAGGLAICIAVDQDGSIYALGDKCPPVNQPLSFGKVSNGCIEDPVLGTKFNLKKGTVEGPWCPSGIGKLLGGLFEP----SGVPTYPVK 146          
BLAST of mRNA_L-elsbetiae_contig14671.3403.1 vs. uniprot
Match: A0A6U3SB47_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6U3SB47_9STRA)

HSP 1 Score: 112 bits (281), Expect = 3.730e-29
Identity = 54/115 (46.96%), Postives = 75/115 (65.22%), Query Frame = 0
Query:    5 KKSQSKFEWVPVVPIKEAPSPGTAKSVFVSDLDLCVAADEQGLLYVLGNKCPPANQPLSFSLVVNNCIKDPVLGTKINIETGDVVEWCPSLLGKLLSPILGPEPENAGVNVFKVR 119
            KK   K +++P +   + P+PG+A S     L +C+A DE+G ++ LG+KCPP NQPLSF  VV   I DPVLGT+ +++TG+VV WCPS LGKL+  I  P     GV V+ V+
Sbjct:   31 KKVGPKLQYMPCISTDDLPAPGSATSGVAGGLAICIAVDEKGSVFALGDKCPPVNQPLSFGKVVGGTIADPVLGTQFDLKTGEVVSWCPSGLGKLIGGIFDP----VGVPVYPVQ 141          
BLAST of mRNA_L-elsbetiae_contig14671.3403.1 vs. uniprot
Match: A0A7S2IGL8_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IGL8_9STRA)

HSP 1 Score: 112 bits (281), Expect = 4.150e-29
Identity = 55/113 (48.67%), Postives = 75/113 (66.37%), Query Frame = 0
Query:    8 QSKFEWVPVVPIKEAPSPGTAKSVFVSDLDLCVAADEQGLLYVLGNKCPPANQPLSFSLVVNNCIKDPVLGTKINIETGDVV-EWCPSLLGKLLSPILGPEPENAGVNVFKVR 119
            +SK ++VP +  ++ P PG A S     L +C+A DE+G +Y LG+KCPP NQPLSF  V   CI+DPVLGTK N++TG+V  +WCP  +GKLL  +  P    +GV VF V+
Sbjct:   37 KSKVQYVPCISTEDLPEPGFATSGVAGGLAICIAVDEKGSVYALGDKCPPVNQPLSFGRVRGGCIEDPVLGTKFNLKTGEVEGKWCPGGIGKLLGGLFEP----SGVPVFPVK 145          
BLAST of mRNA_L-elsbetiae_contig14671.3403.1 vs. uniprot
Match: A0A6U5FSV0_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5FSV0_9STRA)

HSP 1 Score: 112 bits (280), Expect = 6.530e-29
Identity = 53/118 (44.92%), Postives = 78/118 (66.10%), Query Frame = 0
Query:    2 MAGKKSQSKFEWVPVVPIKEAPSPGTAKSVFVSDLDLCVAADEQGLLYVLGNKCPPANQPLSFSLVVNNCIKDPVLGTKINIETGDVVEWCPSLLGKLLSPILGPEPENAGVNVFKVR 119
            ++ KK +   ++VPV+  ++AP PG+A S     L +CVA    G LY LG+KCPP NQPLSF  V  + I+DPVLGTK +++TG+VV+WCP+ +GKL+  +  P    AGV  + ++
Sbjct:   36 LSAKKFKQALKYVPVITKEQAPKPGSATSGVAGGLAICVACSPTGQLYALGDKCPPVNQPLSFGKVNKDTIEDPVLGTKFSLKTGEVVDWCPAGIGKLVGGLFEP----AGVPTYPIK 149          
BLAST of mRNA_L-elsbetiae_contig14671.3403.1 vs. uniprot
Match: A0A6S9DYT7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9DYT7_9STRA)

HSP 1 Score: 111 bits (278), Expect = 1.210e-28
Identity = 53/113 (46.90%), Postives = 75/113 (66.37%), Query Frame = 0
Query:    8 QSKFEWVPVVPIKEAPSPGTAKSVFVSDLDLCVAADEQGLLYVLGNKCPPANQPLSFSLVVNNCIKDPVLGTKINIETGDVV-EWCPSLLGKLLSPILGPEPENAGVNVFKVR 119
            ++K ++VP +  ++ P+PG A S     L +C+A DE G +Y LG+KCPP NQPLSF  V   CI+DPVLGTK N++TG+V  +WCP  +GKLL  +  P    +GV V+ V+
Sbjct:   38 KAKVQYVPCIATEDLPAPGQATSGVAGGLAICIAVDENGSVYALGDKCPPINQPLSFGRVAGGCIEDPVLGTKFNLKTGEVEGKWCPGGVGKLLGGLFDP----SGVPVYPVK 146          
BLAST of mRNA_L-elsbetiae_contig14671.3403.1 vs. uniprot
Match: B8CBE4_THAPS (Rieske domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CBE4_THAPS)

HSP 1 Score: 107 bits (268), Expect = 3.500e-27
Identity = 52/115 (45.22%), Postives = 74/115 (64.35%), Query Frame = 0
Query:    6 KSQSKFEWVPVVPIKEAPSPGTAKSVFVSDLDLCVAADEQGLLYVLGNKCPPANQPLSFSLV-VNNCIKDPVLGTKINIETGDVVEWCPSLLGKLLSPILGPEPENAGVNVFKVR 119
            K ++K ++VP +   + P PG+A S     L +C+A D +G +Y LG+KCPP NQPLSF  V  +  I DPVLGTK +++TG+VV WCP+ LGKL+  +  P     GV V+ V+
Sbjct:   32 KGKAKLQYVPCISTADLPKPGSATSGVAGGLAICIAVDPKGAVYALGDKCPPVNQPLSFGKVDKDGTIADPVLGTKFDLKTGEVVSWCPTGLGKLIGGLFDP----VGVPVYPVK 142          
BLAST of mRNA_L-elsbetiae_contig14671.3403.1 vs. uniprot
Match: A0A7S0P831_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Minchinia chitonis TaxID=262233 RepID=A0A7S0P831_9EUKA)

HSP 1 Score: 105 bits (262), Expect = 1.220e-26
Identity = 53/118 (44.92%), Postives = 71/118 (60.17%), Query Frame = 0
Query:    1 MMAGKKSQSKFEWVPVVPIKEAPSPGTAKSVFVSDLDLCVAADEQGLLYVLGNKCPPANQPLSFSLVVNNCIKDPVLGTKINIETGDVVEWCPSLLGKLLSPILGPEPENAGVNVFKV 118
            + AG+  + K ++VPV+   + P  G+A S     L +C+A    G L+ LG+KCPP NQPLSF  V    I+DPVLGT  N++TG V  WCPS LGKLL  +  P    +GV V+ V
Sbjct:   36 LSAGRTYKEKLKYVPVITQAQLPPKGSATSGVAGGLAICIAVSPTGQLFALGDKCPPVNQPLSFGKVTATAIEDPVLGTAFNLKTGQVENWCPSGLGKLLGGLFEP----SGVPVYPV 149          
BLAST of mRNA_L-elsbetiae_contig14671.3403.1 vs. uniprot
Match: A0A7S2TF77_PROMC (Hypothetical protein n=1 Tax=Prorocentrum micans TaxID=2945 RepID=A0A7S2TF77_PROMC)

HSP 1 Score: 104 bits (260), Expect = 2.970e-26
Identity = 51/112 (45.54%), Postives = 70/112 (62.50%), Query Frame = 0
Query:   10 KFEWVPVVPIKEAPSPGTAKSVFVSDLDLCVAADEQGLLYVLGNKCPPANQPLSFSLVVNNCIKDPVLGTKINIETGDVVE--WCPSLLGKLLSPILGPEPENAGVNVFKVR 119
            K ++VP +   E P PG A S     L +C+A DE+G ++ LG+KCPP NQPLSF  V + CI+DPVLGTK N++TG V E  WC S +GK++  +  P    AGV  +  +
Sbjct:   11 KLQFVPCISKDELPGPGKATSGVAGGLAICIAVDEKGSVFALGDKCPPINQPLSFGKVADGCIQDPVLGTKFNLKTGAVAEGDWCTSPIGKIVGGLFEP----AGVPTYSCK 118          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14671.3403.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D8LI27_ECTSI8.350e-6183.33Rieske domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A7S3P6K4_9STRA1.040e-3048.25Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7S2VVZ0_9STRA1.060e-2947.06Hypothetical protein n=1 Tax=Triparma pacifica Tax... [more]
A0A6U3SB47_9STRA3.730e-2946.96Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S2IGL8_9STRA4.150e-2948.67Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A6U5FSV0_9STRA6.530e-2944.92Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A6S9DYT7_9STRA1.210e-2846.90Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
B8CBE4_THAPS3.500e-2745.22Rieske domain-containing protein n=1 Tax=Thalassio... [more]
A0A7S0P831_9EUKA1.220e-2644.92Hypothetical protein (Fragment) n=1 Tax=Minchinia ... [more]
A0A7S2TF77_PROMC2.970e-2645.54Hypothetical protein n=1 Tax=Prorocentrum micans T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012748Rieske-like [2Fe-2S] domain, NirD-typePFAMPF13806Rieske_2coord: 12..119
e-value: 6.8E-9
score: 35.6
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilyGENE3D2.102.10.10coord: 10..118
e-value: 4.8E-6
score: 28.2
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilySUPERFAMILY50022ISP domaincoord: 12..92
NoneNo IPR availablePANTHERPTHR21496FERREDOXIN-RELATEDcoord: 6..118
NoneNo IPR availablePANTHERPTHR21496:SF22coord: 6..118

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig14671contigL-elsbetiae_contig14671:1597..2557 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig14671.3403.1mRNA_L-elsbetiae_contig14671.3403.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig14671 1587..2557 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig14671.3403.1 ID=prot_L-elsbetiae_contig14671.3403.1|Name=mRNA_L-elsbetiae_contig14671.3403.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=119bp
MMAGKKSQSKFEWVPVVPIKEAPSPGTAKSVFVSDLDLCVAADEQGLLYV
LGNKCPPANQPLSFSLVVNNCIKDPVLGTKINIETGDVVEWCPSLLGKLL
SPILGPEPENAGVNVFKVR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012748Rieske-like_NirD
IPR036922Rieske_2Fe-2S_sf