prot_L-elsbetiae_contig1445.3281.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1445.3281.1
Unique Nameprot_L-elsbetiae_contig1445.3281.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length1003
Homology
BLAST of mRNA_L-elsbetiae_contig1445.3281.1 vs. uniprot
Match: D8LES1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LES1_ECTSI)

HSP 1 Score: 388 bits (996), Expect = 2.490e-113
Identity = 338/685 (49.34%), Postives = 383/685 (55.91%), Query Frame = 0
Query:   80 AILDDRKRSIEGAKSADPAVFTPLRLQCSLK-KRGGXXXXXXXXXXSCSVSGDNGKDPPPRSPHRIADNSAAGAQRGRQACLRGASMLSLRGEMVVPALGVRLTPIAAPALLHTALFQSLLTRGAEAKLQSGLVTLNEGRRAVLLADNDPLSLRAHIVGVWVSGGXXXXXXXXXXXXXH---SARPSSPLGHPHAYPACLRFLLGFRGGXXXXXXXXXXXXXXXXXXASPSAFLVLHLPGGVGGGTPACFEACALHAGGTAARTAAAAGGAGLVSVSSVGFEQLDFSADVDVEVGRSDKGRERRGGXXXXXXXXXXXXXTNRTVVIGRLRRVSNLSAAGGAFGRALARERGRTRAAQPATSGGAAPPYLPAPSXXXXXXXXXXXXXSTPPPRSSQQPPLVVGRYHGANNRWHGRCQTAAAAVGEEEDGGPPAQ-DRPR-SPPAPMAALTKPMSHNPPVARQQQQRLPAGTNGTGTVTSTGGTPGVTHIPEALRPHVTHHSTSPTKPGSEVSRPPGPEXXXXXXXXXCVAEESGDGDWLAEEGHSRRRGNEPERSAEEEPLRXXXXXXXSQACCGRSTGIPGAGDGTRAVGGRYRPSSSPPL--GEGAALSSSINGVIAAAAVXXXXXXXXAPVTWSKPTSLDLLALDPAAREPTAXXXXXXXXXXXXFAYPHKKTSMVEASTNTS 756
            ++LDD    +  AKSADP  FTPLRLQCSLK +RGG             V G+    P  R  HR A ++  G+  G+ A L+GA+ LSLR EM+ PALGVRLTPIAAPALLHTAL+QSLL+RGAE KLQSGLVTLNEGRRAVLL+DNDPLSLRA IVGVWVSGG                 S R  SPL HP+ YPACLRFLLGFRGG      XXXXXXXXXX   SP AFLVL LPGGVGGGTP C+EACA+ A   +A T  AAGG G+  V+SVGFEQLDFSADVDV VG         G XXXXXXXXXXXXX NR VVI RLRRVS+L+AAGGAFGRALAR RGR R  Q A +G A PP+LP+PS              TPP  S QQ P    R  GA  RWH R  +       E +G    Q DRP   PP P+AA TKP+ H+P  A  +    PA   G  +  +T         PE +  H  HHSTSP K G      P             V   +G+G     +GH R R   P   ++EE  R              S+G          V GR   SSSPP    +G  L S            XXXXXXX    W+   SLDLLAL P A   TA             A  ++  SMVEASTNTS
Sbjct:  307 SLLDDCINRVGAAKSADPPTFTPLRLQCSLKGRRGGATDSRGSGGCDNGVDGETS--PSARKQHRQAGSANGGSGAGQPAPLQGAATLSLRAEMIAPALGVRLTPIAAPALLHTALYQSLLSRGAEDKLQSGLVTLNEGRRAVLLSDNDPLSLRAPIVGVWVSGGDSGGTGGVGTPSGQQQQSGRRLSPLTHPYVYPACLRFLLGFRGGSGASKSXXXXXXXXXX---SPVAFLVLQLPGGVGGGTPGCYEACAVSA---SAATPTAAGGGGM-RVASVGFEQLDFSADVDVSVG---------GXXXXXXXXXXXXXXXNRAVVIARLRRVSSLTAAGGAFGRALARARGRYRGTQQAENGAATPPFLPSPSATR-----------TPPQPSPQQRPPPP-RSIGATQRWHSRHHSQPTPEDRENEGPTEVQQDRPLLHPPVPIAAPTKPVVHSPRSAASKADSSPARATGRTSAINT---------PEKILSHAIHHSTSPAKRGLRGGSGP----------RASVLGGAGEGTTRPGDGHGRPR---PPWRSQEEGFREL------------SSGXXXXXXXXXXVEGREASSSSPPSLPEKGEELPSXXXXXX------XXXXXXXXXPAWTPRNSLDLLALAPEATGDTAWAQQAMPPPSE--APYNRAKSMVEASTNTS 919          
BLAST of mRNA_L-elsbetiae_contig1445.3281.1 vs. uniprot
Match: A0A6H5KM75_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM75_9PHAE)

HSP 1 Score: 248 bits (634), Expect = 1.900e-64
Identity = 211/507 (41.62%), Postives = 249/507 (49.11%), Query Frame = 0
Query:   80 AILDDRKRSIEGAKSADPAVFTPLRLQCSLKKRGGXXXXXXXXXXSCSVSGDNGKDPPPRSPHRIADNSA-AGAQRGRQACLRGASMLSLRGEMVVPALGVRLTPIAAPALLHTALFQSLLTRGAEAKLQSGLVTLNEGRRAVLLADNDPLSLRAHIVGVWVSGGXXXXXXXXXXXXXH---SARPSSPLGHPHAYPACLRFLLGFRGGXXXXXXXXXXXXXXXXXXASPSAFLVLHLPGGVGGGTPACFEACALHAGGTAARTAAAAGGAGLVSVSSVGFEQLDFSADVDVEVGRSDKGRERRGGXXXXXXXXXXXXXTNRTVVIGRLRRVSNLSAAGGAFGRALARERGRTRAAQPATSGGAAPPYLPAPSXXXXXXXXXXXXXSTPPPRSSQQPPLVVGRYHGANNRWHGRCQTAAAAVGEEEDGGPPAQ-DRPR-SPPAPMAALTKPMSHNPPVARQQQQRLPAGTNGTGTVTSTGGTPGVTHIPEALRPHVTHHSTSPTKPG 580
            ++LDD  + +  AKSADP+ FTPLRLQCSLK                 V G+    P  R+ HR A  SA  G+  G+ A  +GA+ LSLR E++ PALGVRLTPIAAPALLHTAL+QSLL+RGAE KLQSGLVTLNEGRRAVLL+D+DPLSLRA IVGVWVSGG                 S R SSPL HP+ YPACLRFL+GFRG       XXXXXXXXXXXX SP AFLVL LPGGVGGGT                                                G +   R  RGG                 + +  +R   N                 R R  Q A +G  APP++P+PS               P P+    PP  +G    A  RWH R          E +G    Q DRP   PP P+AA TKP+ H+P  A  +    PA         +TG T  + + PE +  H  HHSTSP K G
Sbjct:  302 SLLDDCIKRVGAAKSADPSTFTPLRLQCSLK------------GLDNGVHGETS--PSARNQHRQAGGSANGGSGAGQPAPRQGAATLSLRAEIIAPALGVRLTPIAAPALLHTALYQSLLSRGAEDKLQSGLVTLNEGRRAVLLSDSDPLSLRAPIVGVWVSGGDSGSTGGVGTPSGQQQQSGRRSSPLTHPYVYPACLRFLIGFRGAGGTSKSXXXXXXXXXXXXXSPVAFLVLQLPGGVGGGTXXXXXXXXXXX----------XXXXXXXXXXXXXXXXXXXXXXRGCRRGHAGVLRGVRGGMCQRQIMTASVVRGFTRLAVDGMRAAHNAGLTNSLSD--------RYRGTQQAENGATAPPFVPSPSATRMPLQ--------PSPQQRPPPPRAIG----ATQRWHSRYHNQPTPEDRENEGPTEMQQDRPLLHPPVPIAAPTKPVVHSPRSAASKADSPPA--------RATGHTSAI-NSPEKILSHAIHHSTSPAKRG 755          
BLAST of mRNA_L-elsbetiae_contig1445.3281.1 vs. uniprot
Match: UPI000A1C1CC1 (SCL-interrupting locus protein n=1 Tax=Boleophthalmus pectinirostris TaxID=150288 RepID=UPI000A1C1CC1)

HSP 1 Score: 58.5 bits (140), Expect = 7.300e-5
Identity = 33/78 (42.31%), Postives = 48/78 (61.54%), Query Frame = 0
Query:  167 SLRGEMVVPALGVRLTPIAAPALLHTALFQSLLT--RGAEAKLQSGLVTLNEGRRAVLLADNDPLSLRAHIVGVWVSG 242
            SL    V PA GV + P+ A  ++ TAL +SL +  R A    Q G VT+++GR+ +LL ++DP +L   +VGVW SG
Sbjct:  195 SLTWSCVSPATGVHVEPVRAAHVIPTALLRSLTSPARPAATSRQKGFVTMDQGRKLLLLLESDPKALSLPLVGVWFSG 272          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1445.3281.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LES1_ECTSI2.490e-11349.34Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KM75_9PHAE1.900e-6441.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI000A1C1CC17.300e-542.31SCL-interrupting locus protein n=1 Tax=Boleophthal... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1445contigL-elsbetiae_contig1445:13851..18692 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1445.3281.1mRNA_L-elsbetiae_contig1445.3281.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1445 12870..20280 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1445.3281.1 ID=prot_L-elsbetiae_contig1445.3281.1|Name=mRNA_L-elsbetiae_contig1445.3281.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1003bp
MGAGGAVGAAVAQQKQQQEEEAAAAGKAVPLSGRRRRAETVQGRAVAVTG
AMSVEGGGGGGGGSTGPARWQSEGAPLRRAILDDRKRSIEGAKSADPAVF
TPLRLQCSLKKRGGGGRGRGGGGTSCSVSGDNGKDPPPRSPHRIADNSAA
GAQRGRQACLRGASMLSLRGEMVVPALGVRLTPIAAPALLHTALFQSLLT
RGAEAKLQSGLVTLNEGRRAVLLADNDPLSLRAHIVGVWVSGGGSAANGQ
QQQQQQHSARPSSPLGHPHAYPACLRFLLGFRGGGSGGGGGGRGGGATKA
AAASPSAFLVLHLPGGVGGGTPACFEACALHAGGTAARTAAAAGGAGLVS
VSSVGFEQLDFSADVDVEVGRSDKGRERRGGEGGGGGGGGGGGGTNRTVV
IGRLRRVSNLSAAGGAFGRALARERGRTRAAQPATSGGAAPPYLPAPSTA
PTTPAPAPAPASTPPPRSSQQPPLVVGRYHGANNRWHGRCQTAAAAVGEE
EDGGPPAQDRPRSPPAPMAALTKPMSHNPPVARQQQQRLPAGTNGTGTVT
STGGTPGVTHIPEALRPHVTHHSTSPTKPGSEVSRPPGPEPGPGSGGGGC
VAEESGDGDWLAEEGHSRRRGNEPERSAEEEPLRRSEGGGGSQACCGRST
GIPGAGDGTRAVGGRYRPSSSPPLGEGAALSSSINGVIAAAAVAAAPAAA
PAPVTWSKPTSLDLLALDPAAREPTAAAATAAAAAAAAFAYPHKKTSMVE
ASTNTSFSLLLVPDGASPRASAAAAAAAAGNACAGTTASVCETAVRASQP
DPRVRRESQAEVDEGQRRESDGDRAAVSRSRLRRAAPIADRDKEVAGGAA
PGWTTQRGSPAAQERRRSKGGGDSSSNGPHGDREGSGTAWSSSPEEDWEE
SLESPSSLELFLRLPGARGHQRPASGDEKASRAALGEEKEEEEDEGGEVD
EGNEGNGEEEEQQEMEEIHHKPAIVTPDRSGASGFRRRRGTAGRGWGGGV
RG*
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