prot_L-elsbetiae_contig1387.2915.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1387.2915.1
Unique Nameprot_L-elsbetiae_contig1387.2915.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length143
Homology
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BLAST of mRNA_L-elsbetiae_contig1387.2915.1 vs. uniprot
Match: D7G4L4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4L4_ECTSI)

HSP 1 Score: 93.2 bits (230), Expect = 2.160e-19
Identity = 55/82 (67.07%), Postives = 65/82 (79.27%), Query Frame = 0 
Query:    9 MIDLGVAPEDLAAIAEEIAKTSSKIESVELALGGRGEYLGMGTTDKEKLLGQLDVLQTKEAQLQKKELLIMGAAVAGASAAA 90
            M D G    +L A+AE++AKTS+KIESVE+AL G+G YLG+  TDK+ LL QLDVLQ KEAQLQ KEL IM AAVAGASA+A
Sbjct:    1 MADAGTTTAELTAVAEDLAKTSAKIESVEMALSGQGVYLGI--TDKDTLLSQLDVLQKKEAQLQTKELFIM-AAVAGASASA 79
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1387.2915.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G4L4_ECTSI2.160e-1967.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 54..74

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1387contigL-elsbetiae_contig1387:23236..24988 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1387.2915.1mRNA_L-elsbetiae_contig1387.2915.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1387 23104..24988 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1387.2915.1 ID=prot_L-elsbetiae_contig1387.2915.1|Name=mRNA_L-elsbetiae_contig1387.2915.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=143bp
MEHQPYYGMIDLGVAPEDLAAIAEEIAKTSSKIESVELALGGRGEYLGMG
TTDKEKLLGQLDVLQTKEAQLQKKELLIMGAAVAGASAAAPTPSPPLPAA
PAAPAFSSTRTAALPKGCLPVPAPGAAASPASSPASALSLSSA
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