prot_L-elsbetiae_contig1386.2908.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1386.2908.1
Unique Nameprot_L-elsbetiae_contig1386.2908.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length151
Homology
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BLAST of mRNA_L-elsbetiae_contig1386.2908.1 vs. uniprot
Match: D7FNJ2_ECTSI (Clathrin light chain n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNJ2_ECTSI)

HSP 1 Score: 148 bits (374), Expect = 1.560e-41
Identity = 99/153 (64.71%), Postives = 109/153 (71.24%), Query Frame = 0 
Query:    1 GYVDSGSPPPVAFGMPEPAPYDLGGGGGDEQFXXXXXXXXXXXXXXXXXXXXGEPFXXXXXXXXXXXXXSGE--PGMPLQASSTPYQSKPTDPYSLEETAGTMETAQSQFDAAVKERADQEVAKAAEVKKLAEEELDGFYDGRTDEVLQRSPR 151
            G+VD+GSPPPVA+GM E A YDLGGGGG +QF                    G   X   XXXXXXXXX G+   G+PLQASSTPYQ KPTDP SLEE AG ME AQSQFDA VKERA++E AKAAEVK+LAEEELDGFYDGRTDEV +R  R
Sbjct:   29 GFVDAGSPPPVAYGMQETAAYDLGGGGGGDQFGVVGDGEQFGG---------GXXXXEGLXXXXXXXXXXGDHFEGVPLQASSTPYQPKPTDPCSLEEAAGVMEEAQSQFDAVVKERAEKEAAKAAEVKRLAEEELDGFYDGRTDEVARRQAR 172
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1386.2908.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FNJ2_ECTSI1.560e-4164.71Clathrin light chain n=2 Tax=Ectocarpus TaxID=2879... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 113..133

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1386contigL-elsbetiae_contig1386:25356..26576 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1386.2908.1mRNA_L-elsbetiae_contig1386.2908.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1386 25356..26576 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1386.2908.1 ID=prot_L-elsbetiae_contig1386.2908.1|Name=mRNA_L-elsbetiae_contig1386.2908.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=151bp
GYVDSGSPPPVAFGMPEPAPYDLGGGGGDEQFGGGGGDQFGGGGGGDQFG
GGGEPFGGGGEQFGGGGGGSGEPGMPLQASSTPYQSKPTDPYSLEETAGT
METAQSQFDAAVKERADQEVAKAAEVKKLAEEELDGFYDGRTDEVLQRSP
R
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