prot_L-elsbetiae_contig1383.2896.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1383.2896.1
Unique Nameprot_L-elsbetiae_contig1383.2896.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length320
Homology
BLAST of mRNA_L-elsbetiae_contig1383.2896.1 vs. uniprot
Match: D7FZQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZQ3_ECTSI)

HSP 1 Score: 431 bits (1107), Expect = 1.330e-147
Identity = 234/333 (70.27%), Postives = 262/333 (78.68%), Query Frame = 0
Query:    1 GRPLSSRRSG-GRSDLRRVPLKKRSQSLGEKMAL----AVSNPTREPPPPSK--LMLYHVSRPEPRARWVFNLSKHTNVVDNNAPPEAITSTIDKNRPNLGGLVWINAVEGNLHCCLQKGVKNKAVTPVPAEVLDGWLNGQTGFWWIGALKEGHRALWDSHVVMNWAMVFIPSSPEVAARNNMNVWRDKCLPGSLRVARPGELARKILDIVADDQDKEPDQLVHTHLCILLAEGDDLELRRPKMFQA-PTPTPSQAGLERDGAPGSRPASARGLRP-----GSAGGGGGADPALGPLSPENAAALEEAMEKVGKYRERVVILKEDRRSKKALV 320
            GRPLS  RS  GR+   R  L+KRSQS+G+KMAL    A S  T  P  P +  L+LYHVSRPEPRARWVFNLSKHTNV D+  PPE ITSTIDK RPNLGGLVW+NAV G+LHCCLQKGVKNKAVTPVPA VLDGWLNGQTG WWIGALKEGHRALWDSHVVMNWAMVFIPSSPE+AA+NNM VW DKCLPGSLRVARPGEL RKILDIVADDQDKEP Q+VHTHLCILLAEGDDLEL+RP+MF +  TP+P +    +     SR  S+  L P     G A  G   D +LG ++  N A +EEA+EKV KYRER+VILK+DRR+KKAL+
Sbjct:   27 GRPLSVGRSRTGRTAETRRALRKRSQSVGDKMALVGPGAPSPTTFSPQAPVQPNLLLYHVSRPEPRARWVFNLSKHTNVTDSGPPPETITSTIDKKRPNLGGLVWVNAVAGSLHCCLQKGVKNKAVTPVPANVLDGWLNGQTGLWWIGALKEGHRALWDSHVVMNWAMVFIPSSPEIAAKNNMEVWHDKCLPGSLRVARPGELTRKILDIVADDQDKEPSQVVHTHLCILLAEGDDLELKRPRMFSSVTTPSPGETPTSKKALSHSRSISSFDLGPSLEKNGLARAG---DASLGAITNRNVAGIEEALEKVAKYRERIVILKDDRRAKKALM 356          
BLAST of mRNA_L-elsbetiae_contig1383.2896.1 vs. uniprot
Match: A0A6H5KYF6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYF6_9PHAE)

HSP 1 Score: 263 bits (672), Expect = 3.500e-82
Identity = 134/176 (76.14%), Postives = 146/176 (82.95%), Query Frame = 0
Query:    1 GRPLS--SRRSGGRSDLRRVPLKKRSQSLGEKMALA---VSNPTREPPPPSK--LMLYHVSRPEPRARWVFNLSKHTNVVDNNAPPEAITSTIDKNRPNLGGLVWINAVEGNLHCCLQKGVKNKAVTPVPAEVLDGWLNGQTGFWWIGALKEGHRALWDSHVVMNWAMVFIPSSPE 169
            GRPLS    RSG  ++LRR  L+KRSQS+G+KM L      +P   PP P++  L+LYHVSRPEPRARWVFNLSK TNV D+  PPE ITSTIDK RPNLGGLVW+NAV G+LHCCLQKGVKNKAVTPVPA VLDGWLNGQTG WWIGALKEGHRALWDSHVVMNWAMVFIPSSPE
Sbjct:  207 GRPLSVGRSRSGRTAELRRS-LRKRSQSVGDKMVLVGPGAPSPPFNPPAPAQPNLLLYHVSRPEPRARWVFNLSKPTNVTDSGPPPETITSTIDKKRPNLGGLVWVNAVAGSLHCCLQKGVKNKAVTPVPANVLDGWLNGQTGLWWIGALKEGHRALWDSHVVMNWAMVFIPSSPE 381          
BLAST of mRNA_L-elsbetiae_contig1383.2896.1 vs. uniprot
Match: A0A6H5L5X5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5X5_9PHAE)

HSP 1 Score: 164 bits (415), Expect = 3.140e-42
Identity = 97/151 (64.24%), Postives = 111/151 (73.51%), Query Frame = 0
Query:  176 MNVWRDKCLPGSLRVARPGELARKILDIVADDQDKEPDQLVHTHLCILLAEGDDLELRRPKMFQ-APTPTPSQAGLERDGAPGSRPASARGL-----RPGSAGGGGGADPALGPLSPENAAALEEAMEKVGKYRERVVILKEDRRSKKALV 320
            M VW DKCLPGSLRVARPGEL RKILDIVADDQDKEP Q+VHTHLCILLAEGDDLEL+RP+MF  A TP+P +    +     SR  S   L     + G A GG   D +LG ++  N A +EEA+EKV KYRER+VILKEDRR+KKALV
Sbjct:    1 MEVWHDKCLPGSLRVARPGELTRKILDIVADDQDKEPSQVVHTHLCILLAEGDDLELKRPRMFSSATTPSPGEITTSKKALSHSRSISLFDLGQSLEKNGLARGG---DASLGAITNRNVAGIEEALEKVAKYRERIVILKEDRRAKKALV 148          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1383.2896.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FZQ3_ECTSI1.330e-14770.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KYF6_9PHAE3.500e-8276.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L5X5_9PHAE3.140e-4264.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 292..312

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1383contigL-elsbetiae_contig1383:23725..26520 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1383.2896.1mRNA_L-elsbetiae_contig1383.2896.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1383 23725..26520 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1383.2896.1 ID=prot_L-elsbetiae_contig1383.2896.1|Name=mRNA_L-elsbetiae_contig1383.2896.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=320bp
GRPLSSRRSGGRSDLRRVPLKKRSQSLGEKMALAVSNPTREPPPPSKLML
YHVSRPEPRARWVFNLSKHTNVVDNNAPPEAITSTIDKNRPNLGGLVWIN
AVEGNLHCCLQKGVKNKAVTPVPAEVLDGWLNGQTGFWWIGALKEGHRAL
WDSHVVMNWAMVFIPSSPEVAARNNMNVWRDKCLPGSLRVARPGELARKI
LDIVADDQDKEPDQLVHTHLCILLAEGDDLELRRPKMFQAPTPTPSQAGL
ERDGAPGSRPASARGLRPGSAGGGGGADPALGPLSPENAAALEEAMEKVG
KYRERVVILKEDRRSKKALV
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