prot_L-elsbetiae_contig13811.2883.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig13811.2883.1
Unique Nameprot_L-elsbetiae_contig13811.2883.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length94
Homology
BLAST of mRNA_L-elsbetiae_contig13811.2883.1 vs. uniprot
Match: D7FL29_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL29_ECTSI)

HSP 1 Score: 83.2 bits (204), Expect = 1.370e-16
Identity = 53/70 (75.71%), Postives = 57/70 (81.43%), Query Frame = 0
Query:   28 TASARRNLSSLSLALAVDRPILLHGAAGAGKSTLAREAARLISA---GSDEDTEASSPALLEVHLDDQTD 94
            TASARRNLSSLSLAL VDRPILL+G AG+GKS LAREAARLIS    G D +  ASS  LLE+HLDDQTD
Sbjct:  405 TASARRNLSSLSLALTVDRPILLYGPAGSGKSLLAREAARLISNSGDGVDPEPGASSTPLLELHLDDQTD 474          
BLAST of mRNA_L-elsbetiae_contig13811.2883.1 vs. uniprot
Match: A0A6H5JB27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB27_9PHAE)

HSP 1 Score: 70.5 bits (171), Expect = 3.990e-12
Identity = 56/118 (47.46%), Postives = 58/118 (49.15%), Query Frame = 0
Query:   28 TASARRNLSSLSLALAVDRPILLHGAAGAGKSTLAREAARLISA---------------------------------------------------GSDEDTEASSPALLEVHLDDQTD 94
            TASARRNLSSLSLAL VDRPILLHG AG+GKS LAREAARLIS                                                    G D D  ASS ALLE+HLDDQTD
Sbjct:  404 TASARRNLSSLSLALTVDRPILLHGPAGSGKSLLAREAARLISNSGAGMTVRPQLKVQPVILNQPRQSIQNDIHVLTNLAASPHAALNPIPCEADGVDPDPGASSTALLELHLDDQTD 521          
BLAST of mRNA_L-elsbetiae_contig13811.2883.1 vs. uniprot
Match: A0A835Z947_9STRA (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z947_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 1.070e-6
Identity = 37/58 (63.79%), Postives = 39/58 (67.24%), Query Frame = 0
Query:   38 LSLALAVDRPILLHGAAGAGKSTLAREAARLISAGSDEDTEASSPA-LLEVHLDDQTD 94
            LSLAL    P+LLHGAAGAGKS L REAARL   G         PA LLE+HLDDQTD
Sbjct:    4 LSLALLQPGPVLLHGAAGAGKSALLREAARLSCRG---------PAPLLELHLDDQTD 52          
BLAST of mRNA_L-elsbetiae_contig13811.2883.1 vs. uniprot
Match: A0A5D6XYG6_9STRA (VWFA domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XYG6_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 2.020e-6
Identity = 34/71 (47.89%), Postives = 48/71 (67.61%), Query Frame = 0
Query:   24 PAASTASARRNLSSLSLALAVDRPILLHGAAGAGKSTLAREAARLISAGSDEDTEASSPALLEVHLDDQTD 94
            P  +TAS +RNL SL++AL + RPIL+ GA G GK+ + RE ARL  +G+D+        ++E+HLDDQ D
Sbjct:  325 PLVATASTKRNLQSLAIALGLKRPILVAGAGGCGKTAMIRELARL--SGNDD--------MVELHLDDQID 385          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13811.2883.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FL29_ECTSI1.370e-1675.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JB27_9PHAE3.990e-1247.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z947_9STRA1.070e-663.79P-loop containing nucleoside triphosphate hydrolas... [more]
A0A5D6XYG6_9STRA2.020e-647.89VWFA domain-containing protein n=1 Tax=Pythium bra... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 30..94
e-value: 1.5E-6
score: 29.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 33..70

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13811contigL-elsbetiae_contig13811:992..1495 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13811.2883.1mRNA_L-elsbetiae_contig13811.2883.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig13811 992..1738 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig13811.2883.1 ID=prot_L-elsbetiae_contig13811.2883.1|Name=mRNA_L-elsbetiae_contig13811.2883.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=94bp
MVETASSAAVDSSRSDDNLTRSVPAASTASARRNLSSLSLALAVDRPILL
HGAAGAGKSTLAREAARLISAGSDEDTEASSPALLEVHLDDQTD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase