prot_L-elsbetiae_contig1381.2882.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1381.2882.1
Unique Nameprot_L-elsbetiae_contig1381.2882.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length101
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig1381.2882.1 vs. uniprot
Match: D7FKC8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKC8_ECTSI)

HSP 1 Score: 54.3 bits (129), Expect = 2.550e-6
Identity = 29/39 (74.36%), Postives = 32/39 (82.05%), Query Frame = 0 
Query:   35 KGVARTSSLLSLFEAQSVEHVTSGGGGGRDNSGPYLDDD 73
            + +ARTSSLLSL+EAQSVEHV    G  RDNSGPYLDDD
Sbjct: 1088 RALARTSSLLSLYEAQSVEHVA---GIRRDNSGPYLDDD 1123
[Close]
BLAST of mRNA_L-elsbetiae_contig1381.2882.1 vs. uniprot
Match: A0A6H5L375_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L375_9PHAE)

HSP 1 Score: 50.4 bits (119), Expect = 5.760e-5
Identity = 28/39 (71.79%), Postives = 30/39 (76.92%), Query Frame = 0 
Query:   35 KGVARTSSLLSLFEAQSVEHVTSGGGGGRDNSGPYLDDD 73
            + VAR SSLLSL+EAQSVE V    G  RDNSGPYLDDD
Sbjct: 1090 RAVARASSLLSLYEAQSVEQVA---GIRRDNSGPYLDDD 1125
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1381.2882.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FKC8_ECTSI2.550e-674.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L375_9PHAE5.760e-571.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1381contigL-elsbetiae_contig1381:20091..20393 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1381.2882.1mRNA_L-elsbetiae_contig1381.2882.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1381 20091..20393 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1381.2882.1 ID=prot_L-elsbetiae_contig1381.2882.1|Name=mRNA_L-elsbetiae_contig1381.2882.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=101bp
GQAAARKTPSEERTAPGQGCSAFEASPAPSPALPKGVARTSSLLSLFEAQ
SVEHVTSGGGGGRDNSGPYLDDDGGTLQGTGGSAWGPPYGWRVTVGRRGD
R
back to top