prot_L-elsbetiae_contig128.2248.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig128.2248.1
Unique Nameprot_L-elsbetiae_contig128.2248.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length105
Homology
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BLAST of mRNA_L-elsbetiae_contig128.2248.1 vs. uniprot
Match: A0A6H5K9M1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9M1_9PHAE)

HSP 1 Score: 93.2 bits (230), Expect = 6.750e-20
Identity = 60/114 (52.63%), Postives = 70/114 (61.40%), Query Frame = 0 
Query:    3 TPETELKRLSSSSGGLVSRLTAAIEHRDPSPAVRSETAGGFGRGSK------------LEGGADVPGLDASAPEVRDPQVATAGVSVAAPRVSGDVDASGSMPSIEGSASLPEA 104
            TPE  +KR SS  GG+VSRL AAIEH+ PSP V  E AGGFGRGS             +EG  DVPG DA+ PE+RDP+   A V+     V GDV   G MPS+EG A+LP A
Sbjct:  240 TPEPRMKRFSS--GGVVSRLAAAIEHKGPSPVVGREGAGGFGRGSSFALEKEIGGAPNVEGSVDVPGADANVPEMRDPKAPNAEVT----GVGGDVSVGGLMPSVEGGAALPTA 347
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BLAST of mRNA_L-elsbetiae_contig128.2248.1 vs. uniprot
Match: D8LB94_ECTSI (Similar to AHNAK nucleoprotein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB94_ECTSI)

HSP 1 Score: 92.8 bits (229), Expect = 9.230e-20
Identity = 61/116 (52.59%), Postives = 71/116 (61.21%), Query Frame = 0 
Query:    1 GATPETELKRLSSSSGGLVSRLTAAIEHRDPSPAVRSETAGGFGRGSK------------LEGGADVPGLDASAPEVRDPQVATAGVSVAAPRVSGDVDASGSMPSIEGSASLPEA 104
            G TPE    R+  SSGG+VSRL AAIEH+ PSP V  E AGGFGRGS             +EG  DVPG DA+ PE+RDP+   A V+     V GDV   GSMPS+EG A+LP A
Sbjct:  368 GTTPE---PRIRFSSGGVVSRLAAAIEHKGPSPVVGREGAGGFGRGSSFALEKEGGGAPNVEGSVDVPGADANVPEMRDPKAPGAEVT----GVGGDVSVGGSMPSVEGGAALPTA 476
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig128.2248.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K9M1_9PHAE6.750e-2052.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LB94_ECTSI9.230e-2052.59Similar to AHNAK nucleoprotein n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig128contigL-elsbetiae_contig128:50672..51691 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig128.2248.1mRNA_L-elsbetiae_contig128.2248.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig128 50672..51693 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig128.2248.1 ID=prot_L-elsbetiae_contig128.2248.1|Name=mRNA_L-elsbetiae_contig128.2248.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=105bp
GATPETELKRLSSSSGGLVSRLTAAIEHRDPSPAVRSETAGGFGRGSKLE
GGADVPGLDASAPEVRDPQVATAGVSVAAPRVSGDVDASGSMPSIEGSAS
LPEAE
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