prot_L-elsbetiae_contig12664.2145.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig12664.2145.1
Unique Nameprot_L-elsbetiae_contig12664.2145.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length53
Homology
BLAST of mRNA_L-elsbetiae_contig12664.2145.1 vs. uniprot
Match: D8LDI4_ECTSI (Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDI4_ECTSI)

HSP 1 Score: 98.2 bits (243), Expect = 1.320e-22
Identity = 45/45 (100.00%), Postives = 45/45 (100.00%), Query Frame = 0
Query:    2 VELNKSYDFNKITEAGAKLRPLSGPGFTGIKNLGNSCYMNSCLQV 46
            VELNKSYDFNKITEAGAKLRPLSGPGFTGIKNLGNSCYMNSCLQV
Sbjct:  355 VELNKSYDFNKITEAGAKLRPLSGPGFTGIKNLGNSCYMNSCLQV 399          
BLAST of mRNA_L-elsbetiae_contig12664.2145.1 vs. uniprot
Match: A0A836CMU5_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMU5_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 8.080e-19
Identity = 38/45 (84.44%), Postives = 42/45 (93.33%), Query Frame = 0
Query:    2 VELNKSYDFNKITEAGAKLRPLSGPGFTGIKNLGNSCYMNSCLQV 46
            VELNKSYDF+KITEAG KL PL GPG+TG+KNLGNSCYMNSCLQ+
Sbjct:  323 VELNKSYDFSKITEAGKKLTPLQGPGYTGLKNLGNSCYMNSCLQL 367          
BLAST of mRNA_L-elsbetiae_contig12664.2145.1 vs. uniprot
Match: A0A7S2V2B3_9STRA (Ubiquitinyl hydrolase 1 (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2B3_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 3.970e-17
Identity = 37/45 (82.22%), Postives = 41/45 (91.11%), Query Frame = 0
Query:    2 VELNKSYDFNKITEAGAKLRPLSGPGFTGIKNLGNSCYMNSCLQV 46
            VELNK+YDF+KITEAGA+L PL G GFTGIKNLGNSCY+NS LQV
Sbjct:  199 VELNKTYDFSKITEAGAQLEPLYGAGFTGIKNLGNSCYINSVLQV 243          
BLAST of mRNA_L-elsbetiae_contig12664.2145.1 vs. uniprot
Match: A0A7S0N978_9CHLO (Ubiquitinyl hydrolase 1 (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0N978_9CHLO)

HSP 1 Score: 80.1 bits (196), Expect = 2.950e-16
Identity = 35/45 (77.78%), Postives = 41/45 (91.11%), Query Frame = 0
Query:    2 VELNKSYDFNKITEAGAKLRPLSGPGFTGIKNLGNSCYMNSCLQV 46
            VELNKS++F+KITEAGA L PLSGPG+ G+KNLGNSCYMNS +QV
Sbjct:  295 VELNKSFEFDKITEAGADLAPLSGPGYVGLKNLGNSCYMNSVMQV 339          
BLAST of mRNA_L-elsbetiae_contig12664.2145.1 vs. uniprot
Match: A0A8J9RIB1_9CHLO (Ubiquitin carboxyl-terminal hydrolase 5 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RIB1_9CHLO)

HSP 1 Score: 75.1 bits (183), Expect = 1.740e-14
Identity = 31/45 (68.89%), Postives = 40/45 (88.89%), Query Frame = 0
Query:    2 VELNKSYDFNKITEAGAKLRPLSGPGFTGIKNLGNSCYMNSCLQV 46
            ++LN S++F+K+TE+GA L PL+GPGF G+KNLGNSCYMNS LQV
Sbjct:  303 IDLNMSFEFDKMTESGAALEPLTGPGFVGLKNLGNSCYMNSVLQV 347          
BLAST of mRNA_L-elsbetiae_contig12664.2145.1 vs. uniprot
Match: I0YIM7_COCSC (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YIM7_COCSC)

HSP 1 Score: 74.7 bits (182), Expect = 2.380e-14
Identity = 31/45 (68.89%), Postives = 39/45 (86.67%), Query Frame = 0
Query:    2 VELNKSYDFNKITEAGAKLRPLSGPGFTGIKNLGNSCYMNSCLQV 46
            ++LN S++F+KITE+G  L PLSGPG+ G+KNLGNSCYMNS LQV
Sbjct:  303 IDLNMSFEFDKITESGTALEPLSGPGYVGLKNLGNSCYMNSVLQV 347          
BLAST of mRNA_L-elsbetiae_contig12664.2145.1 vs. uniprot
Match: A0A2P6U3W2_CHLSO (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6U3W2_CHLSO)

HSP 1 Score: 73.6 bits (179), Expect = 6.070e-14
Identity = 33/45 (73.33%), Postives = 37/45 (82.22%), Query Frame = 0
Query:    2 VELNKSYDFNKITEAGAKLRPLSGPGFTGIKNLGNSCYMNSCLQV 46
            +ELN SY+F+KITEAG  L  LSGPG  G+KNLGNSCYMNS LQV
Sbjct:  294 IELNLSYEFDKITEAGEALEALSGPGLVGLKNLGNSCYMNSVLQV 338          
BLAST of mRNA_L-elsbetiae_contig12664.2145.1 vs. uniprot
Match: A0A7S1BZZ8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BZZ8_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 2.030e-13
Identity = 34/50 (68.00%), Postives = 42/50 (84.00%), Query Frame = 0
Query:    2 VELNKSYDFNKITEAGAKLRPLSGPGFTGIKNLGNSCYMNSCLQV-WSGL 50
            VELN SY F+ ITEAGA+LRP+SGPG+  + NLGNSCY+NS LQ+ +SGL
Sbjct:  168 VELNASYAFDAITEAGAELRPISGPGYQSLVNLGNSCYINSVLQLLYSGL 217          
BLAST of mRNA_L-elsbetiae_contig12664.2145.1 vs. uniprot
Match: A0A2V0PBV4_9CHLO (Ubiquitinyl hydrolase 1 n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PBV4_9CHLO)

HSP 1 Score: 72.0 bits (175), Expect = 2.110e-13
Identity = 32/45 (71.11%), Postives = 37/45 (82.22%), Query Frame = 0
Query:    2 VELNKSYDFNKITEAGAKLRPLSGPGFTGIKNLGNSCYMNSCLQV 46
            V+LN  ++F+ ITEAGA L PLSGPG  G+ NLGNSCYMNSCLQV
Sbjct:  280 VDLNMRFEFDAITEAGAHLVPLSGPGHVGLVNLGNSCYMNSCLQV 324          
BLAST of mRNA_L-elsbetiae_contig12664.2145.1 vs. uniprot
Match: A0A8J4EZ50_9CHLO (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4EZ50_9CHLO)

HSP 1 Score: 72.0 bits (175), Expect = 2.120e-13
Identity = 31/45 (68.89%), Postives = 39/45 (86.67%), Query Frame = 0
Query:    2 VELNKSYDFNKITEAGAKLRPLSGPGFTGIKNLGNSCYMNSCLQV 46
             +LN SY+F++I E+GA+L+PLSGPG TG+ NLGNSCYMNS LQV
Sbjct:  299 ADLNTSYEFSRIMESGAELQPLSGPGLTGLINLGNSCYMNSVLQV 343          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12664.2145.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDI4_ECTSI1.320e-22100.00Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Ecto... [more]
A0A836CMU5_9STRA8.080e-1984.44Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Trib... [more]
A0A7S2V2B3_9STRA3.970e-1782.22Ubiquitinyl hydrolase 1 (Fragment) n=1 Tax=Fibroca... [more]
A0A7S0N978_9CHLO2.950e-1677.78Ubiquitinyl hydrolase 1 (Fragment) n=1 Tax=Pyramim... [more]
A0A8J9RIB1_9CHLO1.740e-1468.89Ubiquitin carboxyl-terminal hydrolase 5 n=1 Tax=Co... [more]
I0YIM7_COCSC2.380e-1468.89Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Cocc... [more]
A0A2P6U3W2_CHLSO6.070e-1473.33Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Chlo... [more]
A0A7S1BZZ8_9STRA2.030e-1368.00Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]
A0A2V0PBV4_9CHLO2.110e-1371.11Ubiquitinyl hydrolase 1 n=1 Tax=Raphidocelis subca... [more]
A0A8J4EZ50_9CHLO2.120e-1368.89Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Volv... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001394Peptidase C19, ubiquitin carboxyl-terminal hydrolasePFAMPF00443UCHcoord: 29..48
e-value: 9.1E-6
score: 25.3
NoneNo IPR availableGENE3D3.90.70.10coord: 22..47
e-value: 1.8E-10
score: 42.0
NoneNo IPR availablePANTHERPTHR21646:SF10coord: 4..46
NoneNo IPR availablePANTHERPTHR21646FAMILY NOT NAMEDcoord: 4..46
IPR018200Ubiquitin specific protease, conserved sitePROSITEPS00972USP_1coord: 30..45
IPR028889Ubiquitin specific protease domainPROSITEPS50235USP_3coord: 29..52
score: 10.048
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 20..48

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12664contigL-elsbetiae_contig12664:4673..4831 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12664.2145.1mRNA_L-elsbetiae_contig12664.2145.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig12664 4673..4831 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig12664.2145.1 ID=prot_L-elsbetiae_contig12664.2145.1|Name=mRNA_L-elsbetiae_contig12664.2145.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=53bp
KVELNKSYDFNKITEAGAKLRPLSGPGFTGIKNLGNSCYMNSCLQVWSGL
AS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001394Peptidase_C19_UCH
IPR018200USP_CS
IPR028889USP_dom
IPR038765Papain-like_cys_pep_sf