prot_L-elsbetiae_contig1263.2128.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1263.2128.1
Unique Nameprot_L-elsbetiae_contig1263.2128.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length118
Homology
BLAST of mRNA_L-elsbetiae_contig1263.2128.1 vs. uniprot
Match: D8LCD1_ECTSI (Ribosomal protein L34 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCD1_ECTSI)

HSP 1 Score: 199 bits (507), Expect = 4.660e-64
Identity = 103/119 (86.55%), Postives = 108/119 (90.76%), Query Frame = 0
Query:    1 MVRGDGRVTYTRRHAYHTLSNKAKVVKTPGGKLVAHYHKKSAKGPRCGD--CGISLPGIKHLRPKEYKNLKKREKTVSRAYGGSRCAGCVRQRVVRAFLIEEQKIVKKVLLEKQKKKKA 117
            MVRGDGR+TYTRRHAYHT SNKAK VKTPGGKLVAHY KKSAKG  C D  C ++LPGIKH+RPKEYKNLKKR+KTVSRAYGGS CA CVRQRVVRAFLIEEQKIVKKVLLEKQKKKKA
Sbjct:   19 MVRGDGRITYTRRHAYHTKSNKAKAVKTPGGKLVAHYLKKSAKGVHCADASCSVALPGIKHMRPKEYKNLKKRQKTVSRAYGGSLCAPCVRQRVVRAFLIEEQKIVKKVLLEKQKKKKA 137          
BLAST of mRNA_L-elsbetiae_contig1263.2128.1 vs. uniprot
Match: A0A6V2RVW8_HETAK (Hypothetical protein n=2 Tax=Sar TaxID=2698737 RepID=A0A6V2RVW8_HETAK)

HSP 1 Score: 181 bits (458), Expect = 7.420e-57
Identity = 89/113 (78.76%), Postives = 97/113 (85.84%), Query Frame = 0
Query:    5 DGRVTYTRRHAYHTLSNKAKVVKTPGGKLVAHYHKKSAKGPRCGDCGISLPGIKHLRPKEYKNLKKREKTVSRAYGGSRCAGCVRQRVVRAFLIEEQKIVKKVLLEKQKKKKA 117
            D RV YTRRH Y T SNK K+ KTPGG+LVAHYHKK A GP+C DCG  L GIKHLRPK+YKNLKKREKTVSRAYGGS CAGCVRQR+VRAFLIEEQKIVKK+++EK KK KA
Sbjct:    4 DIRVQYTRRHCYATKSNKVKITKTPGGRLVAHYHKKKAAGPKCSDCGTVLAGIKHLRPKQYKNLKKREKTVSRAYGGSACAGCVRQRIVRAFLIEEQKIVKKMIMEKMKKAKA 116          
BLAST of mRNA_L-elsbetiae_contig1263.2128.1 vs. uniprot
Match: A0A835ZPJ0_9STRA (Ribosomal protein L34e-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZPJ0_9STRA)

HSP 1 Score: 178 bits (452), Expect = 5.720e-56
Identity = 91/110 (82.73%), Postives = 96/110 (87.27%), Query Frame = 0
Query:    4 GDGRVTYTRRHAYHTLSNKAKVVKTPGGKLVAHYHKKSAKGPRCGDCGISLPGIKHLRPKEYKNLKKREKTVSRAYGGSRCAGCVRQRVVRAFLIEEQKIVKKVLLEKQK 113
            GD RVTYTRRHAY T SNK KVV+TPGGK VAHY KK A GP+CGDC I+LPGI  LRPKEYKNLK+REKTVSRAYGGSRCA CVRQRVVRAFLIEEQKIVKK+L EK K
Sbjct:    3 GDKRVTYTRRHAYATASNKIKVVRTPGGKHVAHYRKKKANGPKCGDCKIALPGIACLRPKEYKNLKRREKTVSRAYGGSRCAACVRQRVVRAFLIEEQKIVKKLLAEKIK 112          
BLAST of mRNA_L-elsbetiae_contig1263.2128.1 vs. uniprot
Match: A0A7S2UXI2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXI2_9STRA)

HSP 1 Score: 170 bits (430), Expect = 1.370e-52
Identity = 83/112 (74.11%), Postives = 96/112 (85.71%), Query Frame = 0
Query:    5 DGRVTYTRRHAYHTLSNKAKVVKTPGGKLVAHYHKKSAKGPRCGDCGISLPGIKHLRPKEYKNLKKREKTVSRAYGGSRCAGCVRQRVVRAFLIEEQKIVKKVLLEKQKKKK 116
            D RV Y RRH+Y T SNK K+VKTPGG+LVAHYH K AKGP+C +CGISLPGIKH+RP +YKN+KKREKTV+RAYGGS C  CV+ R+VRAFLIEEQKIVKK++ EK KKKK
Sbjct:    4 DIRVQYRRRHSYATKSNKIKIVKTPGGRLVAHYHTKKAKGPKCAECGISLPGIKHVRPIKYKNMKKREKTVTRAYGGSECGKCVKDRIVRAFLIEEQKIVKKMVAEKLKKKK 115          
BLAST of mRNA_L-elsbetiae_contig1263.2128.1 vs. uniprot
Match: A0A485KJ51_9STRA (Aste57867_7967 protein n=8 Tax=Saprolegniaceae TaxID=4764 RepID=A0A485KJ51_9STRA)

HSP 1 Score: 164 bits (416), Expect = 1.990e-50
Identity = 84/111 (75.68%), Postives = 92/111 (82.88%), Query Frame = 0
Query:    7 RVTYTRRHAYHTLSNKAKVVKTPGGKLVAHYHKKSAKGPRCGDCGISLPGIKHLRPKEYKNLKKREKTVSRAYGGSRCAGCVRQRVVRAFLIEEQKIVKKVLLEKQKKKKA 117
            R+TY RRH+Y T SN+   VKTPGGKLVAHY KK++ GP+CGDC  SL GIKHL  K YKN+ K EKTVSRAYGGSRCAGCVRQR+VRAFLIEEQKIVKKVLLEK  KKK 
Sbjct:    6 RITYRRRHSYATKSNRIVPVKTPGGKLVAHYRKKTSHGPKCGDCKQSLKGIKHLATKAYKNIAKSEKTVSRAYGGSRCAGCVRQRIVRAFLIEEQKIVKKVLLEKLSKKKT 116          
BLAST of mRNA_L-elsbetiae_contig1263.2128.1 vs. uniprot
Match: K3WQZ0_GLOUD (Uncharacterized protein n=4 Tax=Pythiaceae TaxID=4782 RepID=K3WQZ0_GLOUD)

HSP 1 Score: 163 bits (412), Expect = 7.120e-50
Identity = 84/111 (75.68%), Postives = 90/111 (81.08%), Query Frame = 0
Query:    7 RVTYTRRHAYHTLSNKAKVVKTPGGKLVAHYHKKSAKGPRCGDCGISLPGIKHLRPKEYKNLKKREKTVSRAYGGSRCAGCVRQRVVRAFLIEEQKIVKKVLLEKQKKKKA 117
            RVTY RRH+Y T SN  K VKTPGG LVA Y KK   GP+CGDC  SL GIKHL PKEYKN+ K ++TVSRAYGGSRCA CVRQR+VRAFLIEEQKIVKKVLLEK KKK A
Sbjct:    6 RVTYRRRHSYATKSNGIKAVKTPGGVLVAQYRKKRCAGPKCGDCKQSLKGIKHLSPKEYKNVSKTQRTVSRAYGGSRCANCVRQRIVRAFLIEEQKIVKKVLLEKMKKKSA 116          
BLAST of mRNA_L-elsbetiae_contig1263.2128.1 vs. uniprot
Match: K8YVG6_NANGC (Large subunit ribosomal protein L34e n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YVG6_NANGC)

HSP 1 Score: 160 bits (405), Expect = 7.800e-49
Identity = 81/111 (72.97%), Postives = 90/111 (81.08%), Query Frame = 0
Query:    5 DGRVTYTRRHAYHTLSNKAKVVKTPGGKLVAHYHKKSAKGPRCGDCGISLPGIKHLRPKEYKNLKKREKTVSRAYGGSRCAGCVRQRVVRAFLIEEQKIVKKVLLEKQKKK 115
            D RVTY RRHAY T SN   +VKTPGG+L  H  KK  +GP CGDC I+LPGIKHL+ KEYKNL KRE+TVSRAYGGSRCA CVR R+VRAFLIEEQKIVK+VL EK+ KK
Sbjct:    4 DTRVTYQRRHAYATRSNGRVIVKTPGGRLTLHQIKKKTRGPHCGDCKIALPGIKHLKTKEYKNLHKRERTVSRAYGGSRCASCVRSRIVRAFLIEEQKIVKRVLNEKKSKK 114          
BLAST of mRNA_L-elsbetiae_contig1263.2128.1 vs. uniprot
Match: F0YE62_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YE62_AURAN)

HSP 1 Score: 160 bits (405), Expect = 8.300e-49
Identity = 80/110 (72.73%), Postives = 90/110 (81.82%), Query Frame = 0
Query:    5 DGRVTYTRRHAYHTLSNKAKVVKTPGGKLVAHYHKKSAKGPRCGDCGISLPGIKHLRPKEYKNLKKREKTVSRAYGGSRCAGCVRQRVVRAFLIEEQKIVKKVLLEKQKK 114
            D RVT+ RRHAY+T SN  K VKTPGG+LV HY  K  +GP+CGDC  SLPGIKHL    YKN  KRE+TVSRAYGGSRCAGCVRQRVVRAFLIEEQKIVK++++EK KK
Sbjct:    3 DTRVTFKRRHAYNTKSNVLKAVKTPGGRLVGHYASKKRQGPKCGDCKCSLPGIKHLSSFSYKNTHKRERTVSRAYGGSRCAGCVRQRVVRAFLIEEQKIVKQMMMEKSKK 112          
BLAST of mRNA_L-elsbetiae_contig1263.2128.1 vs. uniprot
Match: M4B9E9_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B9E9_HYAAE)

HSP 1 Score: 162 bits (409), Expect = 8.620e-49
Identity = 83/111 (74.77%), Postives = 92/111 (82.88%), Query Frame = 0
Query:    7 RVTYTRRHAYHTLSNKAKVVKTPGGKLVAHYHKKSAKGPRCGDCGISLPGIKHLRPKEYKNLKKREKTVSRAYGGSRCAGCVRQRVVRAFLIEEQKIVKKVLLEKQKKKKA 117
            R+TY RRH+Y T SN  K VKTPGGKLVA Y +K A GP+CGDC  SL GIKHL+PKEYKN+ K  +TVSRAYGGSRCA CVRQR+VRAFLIEEQKIVKKVLLEK KK K+
Sbjct:   51 RITYRRRHSYATKSNAIKPVKTPGGKLVAQYREKRAAGPKCGDCKQSLKGIKHLKPKEYKNVSKTHRTVSRAYGGSRCALCVRQRIVRAFLIEEQKIVKKVLLEKLKKNKS 161          
BLAST of mRNA_L-elsbetiae_contig1263.2128.1 vs. uniprot
Match: A0A7S2TCS5_PROMC (Hypothetical protein n=1 Tax=Prorocentrum micans TaxID=2945 RepID=A0A7S2TCS5_PROMC)

HSP 1 Score: 160 bits (404), Expect = 1.180e-48
Identity = 77/110 (70.00%), Postives = 92/110 (83.64%), Query Frame = 0
Query:    7 RVTYTRRHAYHTLSNKAKVVKTPGGKLVAHYHKKSAKGPRCGDCGISLPGIKHLRPKEYKNLKKREKTVSRAYGGSRCAGCVRQRVVRAFLIEEQKIVKKVLLEKQKKKK 116
            R+TY RRH+Y T SNK + VKTPGG+L A Y KK A GP+CGDC + LPGI  LRPK+YKNL KREK+VSRAYGG+RCAGCVR+R+VRAFLIEEQK+VK++L +K KK K
Sbjct:    6 RITYKRRHSYATKSNKIRAVKTPGGRLTAQYIKKKAAGPKCGDCAVRLPGIPALRPKQYKNLHKREKSVSRAYGGNRCAGCVRERIVRAFLIEEQKVVKRLLAQKAKKSK 115          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1263.2128.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCD1_ECTSI4.660e-6486.55Ribosomal protein L34 n=1 Tax=Ectocarpus siliculos... [more]
A0A6V2RVW8_HETAK7.420e-5778.76Hypothetical protein n=2 Tax=Sar TaxID=2698737 Rep... [more]
A0A835ZPJ0_9STRA5.720e-5682.73Ribosomal protein L34e-domain-containing protein n... [more]
A0A7S2UXI2_9STRA1.370e-5274.11Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A485KJ51_9STRA1.990e-5075.68Aste57867_7967 protein n=8 Tax=Saprolegniaceae Tax... [more]
K3WQZ0_GLOUD7.120e-5075.68Uncharacterized protein n=4 Tax=Pythiaceae TaxID=4... [more]
K8YVG6_NANGC7.800e-4972.97Large subunit ribosomal protein L34e n=3 Tax=Monod... [more]
F0YE62_AURAN8.300e-4972.73Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
M4B9E9_HYAAE8.620e-4974.77Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A7S2TCS5_PROMC1.180e-4870.00Hypothetical protein n=1 Tax=Prorocentrum micans T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008195Ribosomal protein L34AePRINTSPR01250RIBOSOMALL34coord: 16..29
score: 53.57
coord: 29..46
score: 46.03
coord: 47..57
score: 49.35
coord: 67..89
score: 44.72
IPR008195Ribosomal protein L34AePFAMPF01199Ribosomal_L34ecoord: 7..97
e-value: 3.1E-41
score: 139.6
IPR008195Ribosomal protein L34AePANTHERPTHR1075960S RIBOSOMAL PROTEIN L34coord: 7..116
IPR038562Ribosomal protein L34Ae superfamilyGENE3D3.40.1800.40coord: 42..117
e-value: 9.7E-36
score: 123.5
NoneNo IPR availablePANTHERPTHR10759:SF0FI02850P-RELATEDcoord: 7..116
IPR018065Ribosomal protein L34e, conserved sitePROSITEPS01145RIBOSOMAL_L34Ecoord: 18..31

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1263contigL-elsbetiae_contig1263:18573..20508 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1263.2128.1mRNA_L-elsbetiae_contig1263.2128.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1263 18573..20508 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1263.2128.1 ID=prot_L-elsbetiae_contig1263.2128.1|Name=mRNA_L-elsbetiae_contig1263.2128.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=118bp
MVRGDGRVTYTRRHAYHTLSNKAKVVKTPGGKLVAHYHKKSAKGPRCGDC
GISLPGIKHLRPKEYKNLKKREKTVSRAYGGSRCAGCVRQRVVRAFLIEE
QKIVKKVLLEKQKKKKA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008195Ribosomal_L34Ae
IPR038562Ribosomal_L34Ae_sf
IPR018065Ribosomal_L34e_CS