prot_L-elsbetiae_contig126.2095.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig126.2095.1
Unique Nameprot_L-elsbetiae_contig126.2095.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length128
Homology
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BLAST of mRNA_L-elsbetiae_contig126.2095.1 vs. uniprot
Match: D8LTB7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTB7_ECTSI)

HSP 1 Score: 128 bits (321), Expect = 1.200e-35
Identity = 89/127 (70.08%), Postives = 99/127 (77.95%), Query Frame = 0 
Query:    1 AAISRAVEAVLPDGMVATDETIEAINKGCAAEFVSLVSTEASADVSKAEKNMTMSKKDVVDAIKRLGLESYLAGAEEQAVMDTERVQEKRXXXXXXXXXXXXXAVAATRQRELLEATAKRFYDDQGL 127
            A I+RAVEA LPDGM ATDE +EAINK CA EFV+L+STEASA    + KN  MS +DVV+AIKRLGLE+YL GAEE A  DTE+     XXXXXXXXXXXXX   A RQRELLEATAK FY+DQGL
Sbjct:    6 ATIARAVEAALPDGMTATDEMVEAINKSCA-EFVNLLSTEASAKAKCSGKNPVMSNEDVVEAIKRLGLEAYLTGAEEGAAADTEKXXXXXXXXXXXXXXXXXXXXXANRQRELLEATAKSFYEDQGL 131
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig126.2095.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LTB7_ECTSI1.200e-3570.08Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 83..117
IPR009072Histone-foldGENE3D1.10.20.10coord: 1..126
e-value: 2.1E-16
score: 61.9
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 1..122
IPR042225Negative cofactor 2 complex subunit betaPANTHERPTHR46138FAMILY NOT NAMEDcoord: 1..122

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig126contigL-elsbetiae_contig126:25998..28024 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig126.2095.1mRNA_L-elsbetiae_contig126.2095.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig126 25998..28024 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig126.2095.1 ID=prot_L-elsbetiae_contig126.2095.1|Name=mRNA_L-elsbetiae_contig126.2095.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=128bp
AAISRAVEAVLPDGMVATDETIEAINKGCAAEFVSLVSTEASADVSKAEK
NMTMSKKDVVDAIKRLGLESYLAGAEEQAVMDTERVQEKRKKKRKQKQSK
EEEAVAATRQRELLEATAKRFYDDQGL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009072Histone-fold
IPR042225Ncb2