prot_L-elsbetiae_contig12562.2073.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig12562.2073.1
Unique Nameprot_L-elsbetiae_contig12562.2073.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length174
Homology
BLAST of mRNA_L-elsbetiae_contig12562.2073.1 vs. uniprot
Match: D8LRZ0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRZ0_ECTSI)

HSP 1 Score: 221 bits (562), Expect = 6.020e-64
Identity = 112/149 (75.17%), Postives = 128/149 (85.91%), Query Frame = 0
Query:   16 MESSFFEVAEPLDHDTFLSVCDDVLRDSLLLFAPFGLPRHLHQALGSEKEFLRQYGPRFRFVLEAVSDATYRERGVSESEVAVTLHKYTEEEQSEEAIAYLARMSDSLRTLYTPPRVLELPPRTPSMTSELVTIGLSLLRAGAVYAPDP 164
            M S FFEV EPLDH TFLSVCD+VLRDSLL+ APFGLPRHL +ALGSEKEF+R YGPRFRF+LEAVSD TY+ERGV+ES+VAVTLHK TEEEQ+ EA+AYLARM DSLR +Y+P R+LELP R P+ T++L TIG SLL AGAVY P P
Sbjct:    1 MCSVFFEVVEPLDHATFLSVCDEVLRDSLLVLAPFGLPRHLREALGSEKEFIRLYGPRFRFILEAVSDVTYKERGVTESQVAVTLHKLTEEEQNPEAMAYLARMGDSLREIYSPARILELPTRAPTSTADLATIGSSLLGAGAVYTPGP 149          
BLAST of mRNA_L-elsbetiae_contig12562.2073.1 vs. uniprot
Match: A0A835YUV6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUV6_9STRA)

HSP 1 Score: 116 bits (291), Expect = 4.910e-27
Identity = 62/122 (50.82%), Postives = 81/122 (66.39%), Query Frame = 0
Query:   15 EMESSFFEVAEPLDHDTFLSVCDDVLRDSLLLFAPFGLPRHLHQALGSEKEFLRQYGPRFRFVLEAVSDATYRERGVSESEVAVTLHKYTEEEQSEEAIAYLARMSDSLRTLYTPPRVLELP 136
            + E  FF+V  PLD  TFLS   +VL  SL+LFAP GLP  L +   SE  FL  YGPRFR +LEAVS+A Y  RG+SESE++VT+HK   EE+  +A+A +  + ++L+  Y  P VLELP
Sbjct:   34 DSEGDFFQVVAPLDLSTFLSATREVLETSLMLFAPLGLPPLLKRICPSEAGFLETYGPRFRAILEAVSEAVYEARGISESEMSVTIHKLVTEERDAQAVAAMRDLGEALKFAYDAPDVLELP 155          
BLAST of mRNA_L-elsbetiae_contig12562.2073.1 vs. uniprot
Match: A0A0P1A674_PLAHL (Translocase of outer mitochondrial membrane complex, subunit TOM70/TOM72 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A674_PLAHL)

HSP 1 Score: 74.3 bits (181), Expect = 2.710e-12
Identity = 44/129 (34.11%), Postives = 69/129 (53.49%), Query Frame = 0
Query:   20 FFEVAEPLDHDTFLSVCDDVLRDSLLLFAPFGLPRHLHQALGSEKEFLRQYGPRFRFVLEAVSDATYRERGVSESEVAVTLHKYTEEEQSEEAIAYLARMSDSLRTLYTPPRVLELPPRTPSMTSELVT 148
            +F++  P+    FL V   + R    + APFG P  LH+   S +E   Q G  F+ VLE  SD  Y+E+G++E  +A+++HK+ EE    +  + +  +++    LYTPP VLE+P  T      L T
Sbjct:  338 YFDMPSPISKVEFLDVSRTIFRVVSFVLAPFGFPDSLHEKR-SLQEVKTQCGSLFQDVLEVCSDLIYQEKGLNEGAMAMSVHKWVEENHDRDCTSCIKAINELWDVLYTPPSVLEVPDLTEDQIVALAT 465          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12562.2073.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LRZ0_ECTSI6.020e-6475.17Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YUV6_9STRA4.910e-2750.82Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A0P1A674_PLAHL2.710e-1234.11Translocase of outer mitochondrial membrane comple... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12562contigL-elsbetiae_contig12562:1135..2920 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12562.2073.1mRNA_L-elsbetiae_contig12562.2073.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig12562 1135..2921 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig12562.2073.1 ID=prot_L-elsbetiae_contig12562.2073.1|Name=mRNA_L-elsbetiae_contig12562.2073.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=174bp
AAGAGATPSTVSGDEMESSFFEVAEPLDHDTFLSVCDDVLRDSLLLFAPF
GLPRHLHQALGSEKEFLRQYGPRFRFVLEAVSDATYRERGVSESEVAVTL
HKYTEEEQSEEAIAYLARMSDSLRTLYTPPRVLELPPRTPSMTSELVTIG
LSLLRAGAVYAPDPPVFHPGGETG
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