prot_L-elsbetiae_contig12561.2072.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig12561.2072.1
Unique Nameprot_L-elsbetiae_contig12561.2072.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length382
Homology
BLAST of mRNA_L-elsbetiae_contig12561.2072.1 vs. uniprot
Match: A0A6H5KBR4_9PHAE (Protein CASP (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBR4_9PHAE)

HSP 1 Score: 207 bits (526), Expect = 1.520e-55
Identity = 145/291 (49.83%), Postives = 168/291 (57.73%), Query Frame = 0
Query:   94 GLPAERTSYVFCPEAHGMMSGGMIERASKATYDHHHPGARPCPAXXXXXXXXXXXXXXXXXXDAALGGTGQSKINVIDPREQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEAHALVPSHANSNNAKLSKLAVDGGG-VYFGSAGDGRREALGEGGDASNRPRRRGPAPIH--GAVNGGPQGGFHS------RSPSADAEFLTMLVPSSALDWGPSTLAVRAALNGTTEDSPSXXXXXXXXXXXXXXXXXXXXXXXXEAMTSWVEIDCQILNARLVQ 375
            GLP+ERTSYVFCPEA+GMMSGGMIERASKATYD+HHPGARPCPA                      GG G+ K+NVID R+++                                         AE  ALV    +S++A +    VDGGG +YFGSAGD    A GEGG+ SNRPRRRGPAP+H  G     PQ GFH       +SPS+D+EFLTMLVPSS+LDWGPSTLAVRA+LNGT++                    XXXXXXXX    SWVEIDCQIL+ARLVQ
Sbjct: 1058 GLPSERTSYVFCPEAYGMMSGGMIERASKATYDYHHPGARPCPAGRGGDGGVPEDGDSEFH-----GGAGEVKVNVIDARQERLRLLAADSPQVQPHAEDPHAAVDA-----------------AEYLALV----SSSDANMD---VDGGGEIYFGSAGDEGGAAFGEGGNDSNRPRRRGPAPMHHRGPSGATPQRGFHGGSGDYLQSPSSDSEFLTMLVPSSSLDWGPSTLAVRASLNGTSDSD-----------------GXXXXXXXXXXXXSWVEIDCQILSARLVQ 1302          
BLAST of mRNA_L-elsbetiae_contig12561.2072.1 vs. uniprot
Match: D7FWU4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWU4_ECTSI)

HSP 1 Score: 181 bits (458), Expect = 2.160e-51
Identity = 130/282 (46.10%), Postives = 154/282 (54.61%), Query Frame = 0
Query:  111 MMSGGMIERASKATYDHHHPGARPCPAXXXXXXXXXXXXXXXXXXDAALGGTGQSKINVIDPREQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEAHALVPSHANSNNAKLSKLAVDGGG-VYFGSAGDGRREALGEGGDASNRPRRRGPAPIH-----GAVNGGPQGGFHS------RSPSADAEFLTMLVPSSALDWGPSTLAVRAALNGTTEDSPSXXXXXXXXXXXXXXXXXXXXXXXXEAMTSWVEIDCQILNARLVQDVSFT 380
            MMSGGMIERASKATYD+HHPGARPCPA                      GG G+ K+NVIDPR+++                                         AEA ALV    +S++A +    +DGGG +YFGS  D    A G GGD SNRPRRRGPAP+H     GA +  PQ GFH+      +SPS+D+EFLTMLVPSSALDWGPSTLAVRA+LNGT++                         XXX   +SWVEIDCQIL+ARLVQDVSF+
Sbjct:    1 MMSGGMIERASKATYDYHHPGARPCPAGRGGDGGVPEDGDSEFH-----GGAGEVKVNVIDPRQERLRLLAADAPQVQPHAEDPHAAVDA-----------------AEALALV----SSSDANMD---MDGGGNIYFGSGRDEGGAAFGAGGDDSNRPRRRGPAPMHHRGPSGAAS--PQRGFHAGGGDYLQSPSSDSEFLTMLVPSSALDWGPSTLAVRASLNGTSDGD---------------GGRGATAGXXXXXXSSWVEIDCQILSARLVQDVSFS 236          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12561.2072.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KBR4_9PHAE1.520e-5549.83Protein CASP (Fragment) n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWU4_ECTSI2.160e-5146.10Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12561contigL-elsbetiae_contig12561:87..4041 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12561.2072.1mRNA_L-elsbetiae_contig12561.2072.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig12561 87..4041 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig12561.2072.1 ID=prot_L-elsbetiae_contig12561.2072.1|Name=mRNA_L-elsbetiae_contig12561.2072.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=382bp
ERSEERSEEEEPSGKELDLFYRGGHGGHSGHSGHSGHSGHSGHSGHSSGG
SGHSGGGSGGDRGRGGGGGGGGGGRSGDRGQPGAGMVSGTTPGGLPAERT
SYVFCPEAHGMMSGGMIERASKATYDHHHPGARPCPAAAAGGAAGVGIGG
DGDGDDAALGGTGQSKINVIDPREQQQQQQQQRQQRPQQERMRLLAAAEV
GEAPEAAAAAAAAAAAVAEAHALVPSHANSNNAKLSKLAVDGGGVYFGSA
GDGRREALGEGGDASNRPRRRGPAPIHGAVNGGPQGGFHSRSPSADAEFL
TMLVPSSALDWGPSTLAVRAALNGTTEDSPSSAAAGGGGGRGGGGGGGGG
GGGGGEAMTSWVEIDCQILNARLVQDVSFTG*
back to top