prot_L-elsbetiae_contig12555.2068.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig12555.2068.1
Unique Nameprot_L-elsbetiae_contig12555.2068.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length105
Homology
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BLAST of mRNA_L-elsbetiae_contig12555.2068.1 vs. uniprot
Match: D8LQ19_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ19_ECTSI)

HSP 1 Score: 58.9 bits (141), Expect = 6.190e-8
Identity = 35/66 (53.03%), Postives = 42/66 (63.64%), Query Frame = 0 
Query:   46 WMGNNLAP----VAATAAQRAHR---RPGTPERELRQEIMDRLFDELWGRIAPQLLQLVRPAAAAA 104
            W+ NN A     + A+    +HR   R  TP+RELRQEIMDRLFDELW RI P LL ++R   AAA
Sbjct:  287 WVSNNAASEPPALGASTTGGSHRVVARLDTPQRELRQEIMDRLFDELWERITPDLLLVLRQQQAAA 352
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12555.2068.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LQ19_ECTSI6.190e-853.03Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12555contigL-elsbetiae_contig12555:2569..2883 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12555.2068.1mRNA_L-elsbetiae_contig12555.2068.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig12555 2569..2883 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig12555.2068.1 ID=prot_L-elsbetiae_contig12555.2068.1|Name=mRNA_L-elsbetiae_contig12555.2068.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=105bp
TADVDFDGGRASVGDGGPGPRAGAGTPVGSAAAAADTVTPAEHSGWMGNN
LAPVAATAAQRAHRRPGTPERELRQEIMDRLFDELWGRIAPQLLQLVRPA
AAAAP
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