prot_L-elsbetiae_contig12555.2067.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig12555.2067.1
Unique Nameprot_L-elsbetiae_contig12555.2067.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length108
Homology
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BLAST of mRNA_L-elsbetiae_contig12555.2067.1 vs. uniprot
Match: D8LQ19_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ19_ECTSI)

HSP 1 Score: 66.2 bits (160), Expect = 1.770e-10
Identity = 42/81 (51.85%), Postives = 47/81 (58.02%), Query Frame = 0 
Query:   28 PLRYVPGDPFAVEEADVGAWAKHFTYLSVGGPAGXXXXXXXXXXSQEFVGGSGMLSDKRVAEGPVHRAGGGAPPNVVDMDE 108
            PLRYVPGDPFA EEADVGAWAKHFTYLSV  P            S +  GG G+L    VAE P  R       +V++ DE
Sbjct:  111 PLRYVPGDPFANEEADVGAWAKHFTYLSVV-PTERGEGGDAEKRSNDNAGG-GLLERGPVAEPPPVR-------DVMETDE 182
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12555.2067.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LQ19_ECTSI1.770e-1051.85Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12555contigL-elsbetiae_contig12555:1966..2289 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12555.2067.1mRNA_L-elsbetiae_contig12555.2067.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig12555 1966..2289 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig12555.2067.1 ID=prot_L-elsbetiae_contig12555.2067.1|Name=mRNA_L-elsbetiae_contig12555.2067.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=108bp
GCSLGGDSSDRDRGREGEGARKRQQVAPLRYVPGDPFAVEEADVGAWAKH
FTYLSVGGPAGGGGGGGESAASQEFVGGSGMLSDKRVAEGPVHRAGGGAP
PNVVDMDE
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