prot_L-elsbetiae_contig1255.2064.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1255.2064.1
Unique Nameprot_L-elsbetiae_contig1255.2064.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length219
Homology
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BLAST of mRNA_L-elsbetiae_contig1255.2064.1 vs. uniprot
Match: A0A6H5K5B5_9PHAE (BAH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K5B5_9PHAE)

HSP 1 Score: 167 bits (422), Expect = 6.290e-44
Identity = 110/213 (51.64%), Postives = 127/213 (59.62%), Query Frame = 0 
Query:    6 HQTWAPTTAAEVAAAAAVRETQGVAAEAXXXXXXXXXXXXXXXXXXXXXXXVVAENGGPVAAAGGXXXEVGLPSPXXXPKDAERGN-GTXXXXXXXGSSGDVLPPARDDSPVPGVASDNTGGDAMSPRTAEESGEESGGVLKVFMARVQTTLVKESFDKFVVALTDYRGQHISIHELVDVVSECFDHREEREARLVDEFNTFLPPGHAVRWTK 217
            HQ  AP TAA+V AAAA RET+GVA EA                       V  ENGGP      XXX  G+PS    PK+A  G   T       G   D  PPARDDSPVPGVAS NTGG+AM+PR   E+G     VL VFM R + TL  E FDKFV AL+ YR Q +SI ELVDVV +CF+H EERE +LV EFN+FLPPG+AV+ T+
Sbjct: 1090 HQAMAPETAAKVEAAAAARETRGVAVEAAARAEADG---------------VDVENGGPAXXXXXXXXXAGMPS--ACPKEACGGTMSTEREGDGSGVGSDAPPPARDDSPVPGVASGNTGGEAMAPRPQAETGS----VLHVFMDRCKATLTPERFDKFVSALSQYREQRLSIGELVDVVGQCFNHHEEREVKLVKEFNSFLPPGNAVKITR 1281
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1255.2064.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K5B5_9PHAE6.290e-4451.64BAH domain-containing protein n=2 Tax=Ectocarpus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1160.11coord: 146..208
e-value: 1.2E-5
score: 26.8
IPR036600Paired amphipathic helix superfamilySUPERFAMILY47762PAH2 domaincoord: 149..210

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1255contigL-elsbetiae_contig1255:19512..23403 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1255.2064.1mRNA_L-elsbetiae_contig1255.2064.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1255 19512..25809 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1255.2064.1 ID=prot_L-elsbetiae_contig1255.2064.1|Name=mRNA_L-elsbetiae_contig1255.2064.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=219bp
GGVDRHQTWAPTTAAEVAAAAAVRETQGVAAEAAAKAEADGVEVAAEATA
KAEAHGVVAENGGPVAAAGGGGGEVGLPSPSPCPKDAERGNGTSGGGGSG
GSSGDVLPPARDDSPVPGVASDNTGGDAMSPRTAEESGEESGGVLKVFMA
RVQTTLVKESFDKFVVALTDYRGQHISIHELVDVVSECFDHREEREARLV
DEFNTFLPPGHAVRWTKI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036600PAH_sf